Ntho013583.1
Basic Information
- Insect
- Netelia thomsonii
- Gene Symbol
- pnr
- Assembly
- GCA_964017225.1
- Location
- OZ024924.1:7314038-7322668[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.9 2.9e+03 -1.9 0.1 3 12 240 254 239 261 0.67 2 2 8.4e-17 2.7e-13 49.4 5.1 1 35 427 460 427 461 0.98
Sequence Information
- Coding Sequence
- ATGTTCAATGTACCGCCCAAGTTTTACGAGCTTTGCCGTCTTTGTTTATCGTCGGACGGTTCGAAATTGCCGATTTTCGACGATGAAGGCTTGCAGCGTAACTTTGCCGACAAAATACTGACGTGCCTGTCGATAGCGgtGAAAGATGGCGACTGTTTACCACCGATCATCTGTCACCGCTGCGTGTACAAATTGGACGTGCTGCACAATTTTCGCGAGGTATCGCGAAAATCCGACATTATACTCAAACAGTACCTGGACTGCGCCAAGCAGTTGTCGCAGGACAACCAGGAAAAGTCTTTCTCCACTGCCAAAATAGAGGACGAGAGTCCGACGCAGTCGTTTCACCAATTAAACAAGACCTTATTCAACGAGGATGAGAATTCTCCCATCGGCATTAATCAAAACGTAATACCTCAAATACAAACCGACCTTACGGATGAGACGCGAACAGCGGATGAGCGAACAACGACCGATGAGCAACAGATGAGTAGCGGCGTCAAGTGCGAGCCAGAGGACGACACGTGCTCGAACAGTACCGATCCTGATAGATTGGAGATCGAGGATCGCGACGGTGAACAGGACACCGACGGCGAAGAAAACGGTTACGACATGACCGTCAATAAACGCATGAAGCTTGAGAACAGTTACGAGAGCTCCAAGAGAAGTACATCGAACGCCGGAAGTCCTGTTAACAGAATGGACACACCCGAGAGCAATTGCTCGGACACTCACATAGATCAGGAAACGACGAAATTGTGGCAGGCACTTGCTAACAACAGGAGCTTGGAAATAACGAGAACCAACGGTGACAAATTGAACAACGGATTTACCGGAGAGGCGACGAATTTGCTGAGATCGCTGATAAATAATCGACAGATTGGCATAACCGCCGTCGACACGGGACGAGTATCGCCGCAGATAAGATTTTACAGGGATACACAGGGTACAACGATCGAGCGCACAGTGCCGGATTGTTCGATACTTGGCAATCGAACGAACATGCCCGGACTGGAAAGCAAGagTGCCTCGATGGACAGTAATCCGTCGAGTCCCGCGAGCATCGGTCGCAAAGAGACAAAGGGTCGACGAAAGCAGAGTTATCCGAGCAAAGCTCCAACGAGTCCCGACATGATGAATTATCAGCACGAATCGAGCGAGGAAAAGGCCCAAGATTTTACAGCATGGTCGAGCAAAATAAAGGGGaataaaattgacgataataaaCAGCATTACGATCAGCACGGTGGCAATACGACGAAAAAGGTCGACATGTCGTGCACGAATTGTGGCACAATGACAACGACGATATGGCGACGAAACATGAAAGGAGAAATGGTCTGTAACGCTTGCGGGCTTTATTACAAACTTCACGGTGTTAACAGACCGGTTACTATGAGAAGGGACACCATACACACTCGTAGACGCCGACCAAAAGGTGAAAAGCCCACCCGGCACAGAAAAAAAGATATTTCCATATTGCCATCGCAGACCGAGCAAATGGACGCCGAAAGTGCGGATATGTTGGCCGCCCTAAGACGCCAAATACAGCCGCATTTGATGATGGCGGCACTTACGCCACCGCACTTGTCGAGTACTCATCCAACACCGTCCGCCGCTCAGCTCAATTATTCTCTACCCTTGTCGACATACATGATGTCACACCACGCGAAGAACGAGACGAGGGAAAATTCGCGTAGCCGTCGTCCTTCCGACGAGGAACCGGATGACGGTGACGAGGAAAACATCTCTGACTTACCGCTGAATCTCGTTGCCACCTCGCTATCGGAGGAGGCACACTGA
- Protein Sequence
- MFNVPPKFYELCRLCLSSDGSKLPIFDDEGLQRNFADKILTCLSIAVKDGDCLPPIICHRCVYKLDVLHNFREVSRKSDIILKQYLDCAKQLSQDNQEKSFSTAKIEDESPTQSFHQLNKTLFNEDENSPIGINQNVIPQIQTDLTDETRTADERTTTDEQQMSSGVKCEPEDDTCSNSTDPDRLEIEDRDGEQDTDGEENGYDMTVNKRMKLENSYESSKRSTSNAGSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDTGRVSPQIRFYRDTQGTTIERTVPDCSILGNRTNMPGLESKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDMMNYQHESSEEKAQDFTAWSSKIKGNKIDDNKQHYDQHGGNTTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKDISILPSQTEQMDAESADMLAALRRQIQPHLMMAALTPPHLSSTHPTPSAAQLNYSLPLSTYMMSHHAKNETRENSRSRRPSDEEPDDGDEENISDLPLNLVATSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629489;
- 90% Identity
- iTF_00051414;
- 80% Identity
- -