Rexs010288.2
Basic Information
- Insect
- Rhorus exstirpatorius
- Gene Symbol
- pnr
- Assembly
- GCA_963564615.1
- Location
- OY751316.1:31948738-31962554[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 3.6e+03 -1.9 0.1 3 12 237 251 236 258 0.67 2 2 1.1e-16 3.3e-13 49.4 5.1 1 35 425 458 425 459 0.98
Sequence Information
- Coding Sequence
- atgTTCAATGTACCGCCCAAGTTTTACGAGCTTTGTCGTCTTTGTTTATCGTCGGACGGCTCGAAGTTGCCAATTTTCGATGACGAGGGCCTACAGCGCAACTTTGCCGACAAAATACTTACGTGCCTCTCGATAGCGGTGAAAGATGGCGATTGTTTGCCACCGATCATCTGTCATCGTTGCGTGTACAAATTGGACATACTACACAATTTTCGCGAGGTATCTCGAAAATCGGACGTTATACTCAAACAGTACCTGGATTGCGCGAAGCAGTTGTCGTCACAGGACAGCCAGGAAAAGTCTCTCTCCACTGCCAAAATAACGGACGAGAGTCCGACACAGTCGTTTCTGCAATTAAACAAGACCCTATTCAACGAGGATAATGCGAGCTCTCCCGCCAACGTAAATCAAAACGTAATATCTCATACGCAGACCGAAAGAACGGATATGAGGCGAGAATCCGAGGAGAATCAGGAACGTACGAGCAGCATCAAGTGCGAGCCCGATGACGATACGTGCTCGAACAGCACGGATCCCGATAGATTGGAGATCGAGGATCGCGAGGGCGAGCACGAGAGCGACGGCGAGGAGAACGGTTACGATATGACCGTAAACAAACGTATCAAGCTTGAAAATAGTTACGAGAGCTCCAAGAGAAGTACACCGAATGCCGGCAGTCCCGTCAATCGAATGGACACACCCGAGAGCAATTGCTCCGACACTCACATAGATCAGGAAACCACGAAATTATGGCAGGCACTCGCTAAcaaCAGGAGCTTGGAAATAACACGAACAAACGGTGATAAATTGAACAACGGTTTTACCGGCGAGGCGACAAATTTACTGCGCTCGTTGATAAATAATCGACAAATTGGAATAACGGCGGTTGACGCGGACCGAGTCTCGCCGCAGATAAGATTCTACAGGGATACACAGGGTACGACGATCGAGAGAACAGTGCCGGATTGTTCGATACTTGGTAATCGAACGAATATGCCGTGTCTGGAGAGCAAGaGTGCCTCGATGGACAGCAATCCGTCGAGTCCCGCGAGTATAGGTCGCAAGGAAACAAAGGGACGAAGAAAGCAGAGCTATCCGAGCAAAGCGCCCACGAGTCCCGATCCGATGAATTATCATCAGCAAGAAACGAGGGAGGAACAGCAGGCGCAGGATTTTACGGCATGGTCGAgcaaaatgaagggaaaaattgacgataataaaCAGCTATACGATCAGCACGGTGGTAATTCGACGAAAAAGGTCGACATGTCGTGCACGAATTGTGGCACAATGACAACGACAATATGGCGACGAAACATGAAGGGGGAAATGGTATGTAACGCTTGTGGGCTTTATTACAAGCTTCACGGTGTTAACAGACCGGTAACCATGAGAAGGGACACTATACATACCCGTAGACGCCGACCAAAAGGTGAAAAGCCCACCCGGCACAgaaaGAAAGACACCTCGTTATTGCCGACGCAGCCGGAACAAATGGACGCCGAGAGCGCCGATATGCTGGCAGCTCTGAGACGTCAGATACAGCCTCATCTTATGCTAGCGGCGCTTACGCCGCCTCATCTATCGAGCTCATCGCATCCGCCGCCCTCGACGGTACAGCTCAATTATTCGTTGCCCCTGTCGACATACATGATGTCACACCAGCACGTGAAGAACGAGGCGAGGGAACGAAACTCGCGTAGCCGTCGTCCATCCGACGAGGAGCCGGATGACGGTGACGAGGAAAACATCTCCGATCTGCCGCTGAATCTCGTTGCCACTTCGCTTTCGGAGGAGGCACACTGA
- Protein Sequence
- MFNVPPKFYELCRLCLSSDGSKLPIFDDEGLQRNFADKILTCLSIAVKDGDCLPPIICHRCVYKLDILHNFREVSRKSDVILKQYLDCAKQLSSQDSQEKSLSTAKITDESPTQSFLQLNKTLFNEDNASSPANVNQNVISHTQTERTDMRRESEENQERTSSIKCEPDDDTCSNSTDPDRLEIEDREGEHESDGEENGYDMTVNKRIKLENSYESSKRSTPNAGSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDADRVSPQIRFYRDTQGTTIERTVPDCSILGNRTNMPCLESKSASMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPDPMNYHQQETREEQQAQDFTAWSSKMKGKIDDNKQLYDQHGGNSTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKDTSLLPTQPEQMDAESADMLAALRRQIQPHLMLAALTPPHLSSSSHPPPSTVQLNYSLPLSTYMMSHQHVKNEARERNSRSRRPSDEEPDDGDEENISDLPLNLVATSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629489;
- 90% Identity
- iTF_00798949;
- 80% Identity
- -