Basic Information

Gene Symbol
pnr
Assembly
GCA_037043255.1
Location
CM073312.1:13083970-13093170[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1 3e+03 -1.9 0.1 3 12 238 252 237 259 0.67
2 2 9.8e-17 2.8e-13 49.4 5.1 1 35 428 461 428 462 0.98

Sequence Information

Coding Sequence
ATGTTCAATGTACCGCCCAAGTTTTACGAGCTTTGTCGCCTTTGTTTATCGTCGGACGGCTCCAAGCTGCCGATTTTCGATGACGAGGGACTGCAGCGTAACTTTGCCGACAAGATACTTACGTGCCTCTCGATAGCGgTCAAAGATGGCGACTGTCTGCCTCCCATCATTTGCCACCGTTGCGTGTACAAATTGGACATTCTACACAATTTTCGCGAAGTCTCGAGAAAATCTGACGTTATACTCAAACAGTACCTGGACTGCGCGAAGCAGTTGTCCTCACAGGACGACCAGGAAAAATCTTTCTCCACTGCCAAAATCAAGGACGAGTTTCCAACGCAGTCGTTTTTACAATTAAACAAAACGTTATTCAACGAGGACGGAAATTGTCCGATCAGCATAAATCAAAACGTAATACCTCAGACGGAAGAATCGAACGAGATGCGGGACGAGGAGGTGGAAACGAATCGGGAGGACACTGTCGGGAGCATCAAGTGCGAGCCCGAGGACGATACGTGCTCGAATAGCTCGGATCCCGACCGGTTGGAAATCGAGGATCGCGAGGGTGAACACGAGACCGATGGCGAGGAAAACGGTTACGACATGACCGTCAACAAACGTATCAAACTTGAAAACAGTTACGAGAGCAGCTCTAAGCGAAGTACACCGAATGCTGGCAGCCCCGTTAACAGAATGGACACACCTGAGAGCAATTGCTCCGACACCCACATAGACCAGGAGACGACTAAGCTGTGGCAGGCACTTGCCAACAACAGGAGCTTGGAAATAACACGAACGAACGGTGATAAACTGAACAACGGTTTCACGGGCGAGGCAACAAATTTGCTGCGATCGTTGATAAATAATCGACAAATTGGCATCACCGCGGTCGACGGGGATCGAGCATCGCCGCAAATAAGATTCTACAGGGACACACAGGGTACGACGATCGAACGAACGGCTCCGGATTGTTCGATACTCGGTAACCGAACAAACATGCCATGTTTGGAGAGCAAGAGTGTCTCGATGGACAGCAATCCTTCGAGCCCTGCGAGCATCGGTCGGAAAGAAACAAAAGGACGAAGAAAGCAAAGTTATCCGAGCAAAGCGCCAACGAGTCCGGAGCTGATGAATTATCATCAACAAGAATCGAGCGAGGAACAACAGGCCCAAGATTTTACTGCATGGTCAAgcaaaatgaagagaaaaatagacgataataaacaacaaaattatgaTCAACACGGGGGCAGTAATTCGACGAAAAAGGTCGATATGTCTTGCACCAATTGTGGCACTATGACTACGACAATATGGCGACGAAACATGAAGGGCGAAATGGTCTGCAACGCTTGTGGGCTTTATTACAAGCTTCACGGTGTTAACAGACCGGTAACTATGAGAAGGGACACTATACACACCCGTAGACGCCGACCCAAAGGTGAAAAGCCCACCCGGCACAGAAAGAAAGATTCGTCGCTGTTGCAAGCGCAACCGGAACAAATGGACGCGGAAAGTGCAGACATGCTGGCCGCGCTGAGACGACAAATCCAGCCTCATTTAATGCTGGCGGCGTTGACACCGCCGCATTTGTCAAGCGGTCATGCAGCGGCCTCGCCGGCTCAGCTCAATTATTCGTTACCATTATCGACATACATGATGTCACACCACGTGAAGAACGAGGCGAGGGAGCGTTCGACGAGCCGTCGTCCATCCGACGAGGAACCGGATGACGGCGACGAGGAGAATATCTCCGACTTGCCACTGAATCTCGTGGCGACTTCGCTCTCGGAAGAGGCGCACTGA
Protein Sequence
MFNVPPKFYELCRLCLSSDGSKLPIFDDEGLQRNFADKILTCLSIAVKDGDCLPPIICHRCVYKLDILHNFREVSRKSDVILKQYLDCAKQLSSQDDQEKSFSTAKIKDEFPTQSFLQLNKTLFNEDGNCPISINQNVIPQTEESNEMRDEEVETNREDTVGSIKCEPEDDTCSNSSDPDRLEIEDREGEHETDGEENGYDMTVNKRIKLENSYESSSKRSTPNAGSPVNRMDTPESNCSDTHIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDGDRASPQIRFYRDTQGTTIERTAPDCSILGNRTNMPCLESKSVSMDSNPSSPASIGRKETKGRRKQSYPSKAPTSPELMNYHQQESSEEQQAQDFTAWSSKMKRKIDDNKQQNYDQHGGSNSTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKDSSLLQAQPEQMDAESADMLAALRRQIQPHLMLAALTPPHLSSGHAAASPAQLNYSLPLSTYMMSHHVKNEARERSTSRRPSDEEPDDGDEENISDLPLNLVATSLSEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00629489;
90% Identity
iTF_00798949;
80% Identity
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