Dtri001042.1
Basic Information
- Insect
- Dysmachus trigonus
- Gene Symbol
- -
- Assembly
- GCA_949715965.1
- Location
- OX454319.1:9815135-9822288[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.39 76 5.4 0.8 2 23 247 269 246 269 0.94 2 19 0.0025 0.49 12.3 2.6 2 19 312 329 311 332 0.94 3 19 0.012 2.3 10.2 1.8 3 23 345 365 344 365 0.89 4 19 0.071 14 7.7 0.6 3 23 374 394 373 395 0.94 5 19 0.031 6 8.9 1.0 1 23 401 423 401 423 0.92 6 19 5.7e-05 0.011 17.5 2.5 1 23 429 452 429 452 0.98 7 19 0.00037 0.072 14.9 2.9 1 23 458 480 458 480 0.99 8 19 1.1 2.1e+02 4.0 0.0 3 23 491 511 489 511 0.91 9 19 0.0024 0.47 12.4 0.2 1 23 527 549 527 549 0.94 10 19 0.67 1.3e+02 4.7 3.4 1 23 554 576 554 576 0.95 11 19 0.0024 0.47 12.3 0.5 1 23 592 616 592 616 0.97 12 19 0.00025 0.049 15.4 0.5 2 23 621 643 620 643 0.96 13 19 0.0025 0.47 12.3 0.6 1 23 648 671 648 671 0.96 14 19 0.0024 0.46 12.4 0.7 1 23 676 699 676 699 0.96 15 19 0.005 0.98 11.3 0.0 2 23 703 725 702 725 0.96 16 19 0.048 9.2 8.3 3.1 1 23 731 754 731 754 0.94 17 19 0.0019 0.36 12.7 0.2 1 23 760 782 760 782 0.98 18 19 3.7e-06 0.00071 21.2 1.6 1 23 788 810 788 810 0.99 19 19 0.00081 0.16 13.9 0.1 1 23 816 841 816 841 0.97
Sequence Information
- Coding Sequence
- atgacTAGCAAAAAGGACTTAATTACTAAGTCAATGGAGTTGCCCAAATGCATTCGATGCTTTTGCGACCTGTTTGATGATTTCCAACTGATTTTCGATGATACCGGCCTGGAGCTTGAACTCCAGAAATTGCTGTCGGTTTGCTTTGATATGGACATTAAAATTCGATTAGGCGAGATTCAAGCGCTATGTGAAGATTGCCTAAATGAGCTGATTGATACTTATGATATTATTCAAAAGAATGAACAGGAAGGCGCAGGACCTTCGAGAAATCTTATTCCTAGTACTACAATTAAGAAGGAAAATGATCCGCCGTTGGAAAGTTCCGACTCCAATGATTTTGGAGATTTTTCAGACGAAGAaattgctcaaaaatcgtctAGAAAACGAGGTAATACGGAGAAGAAGGGTATCAAAGTAAAAGAATCGAATAACTTAAAAGAGAAACATGCTCAGAGAGTCGTTAAACAGGATACGCGAACTTCTAAAACTGTGGAGCTTGAGGTGGAGGATGAAGATTCGTTAGAAGAAATTAACACGGCAAGTGAGACTTATGATGTTAATCAATGGGATGATGAAAACTTAAATTTGGAAACAGCAGaaaaagatGATGATGACTCTGAAGAATTTAACCAAATTGATTATTTGGAAGATTTTGACGAAGAAATAGACTTCAATGAGTACAAAGGACGTGTTATTCAGAGCAAATTCTCTGATGTTTGTTTCCCTGAGGAGATTAAATGTCGCCTCTGCGACTCTGGCGTAAAGACACATATCGATTTGATGAAGCACACGATGGAGATGCATTGCGTCGAAGAGTTTGCATATCCCTGCATAGTAGATGCAGGATGTGAATCTCTCAGTTCTCAGGAGCACTTAACGCTTCACTTGGTATTTAAACACTATGATTTGAATTCATTGGCAATCTATTCAAAATGCCCAGAGTGTGAAAAACGTTTTAGCGATTTTGCCTCTTTCAACAAACATAGTTGCTATCAGCCACCAGGAAAATTATCTAGAACGAGAGTGGACTGTGATGAATGTGGAAAAgtgtttaaaacaaataaaagGTATCGCTTTCATCTTCAATTTCATCTTGAGAAGCGTCGTCCAAAAGCATGTTTCATTTGCGAAACGCTATTTAGAGATGAAgatgaattttttgagcatgtaATGTACCATCATGAAAAAAGTTTGGATTTTGTGTGTAtaagGTGTGATCGATATTATACAAGTGctgaaacttttaaaaatcatcAAGAGAGTCACAAAAATGAGCGTAAATACGTCTGTAAATTATGCCCTAAAACTTAtacatacaaacattttttgtctgaTCACATGATAACCGATCATGATGCAAAAAGTGATTTTAAGTGCCACATTTGTGGAAAGTATTGGATCAATAAaacttatttgaaaaatcatttattGACGCATAATAAGCCCAAACCAACTGAAGTTATTTGTTGCAATGAGTGCGGATTTGTGGCTGTAGATGAAGCAGAAGCTGAGGCTCACTTAGAAGAGCATGAAGATAAAGATATCCATACTGTTACTGAAATTTTGGACCGGGTGTACCTCTGTGAATATTGTGAATTACCATACAGTTCTCCGAATTATTTAAAAGAGCACAGAATACTACACagcaaaaaacaatttcattgtACTATTTGTTCTACAATTTTTGAAGAGTACAAACTGTTCAAAATGCATAAATCATTGCATCCGGAGTATGTAAAGaggaaaaaaacatttactGTAGCCCATTATTTTGTCTGTGATAATTCAggGTGCTCCAAGAGCTTTCTGCAATGGGCTACCCTTAAGCAACATAAAAAGGTACACGATAACAATCTTAAGTGTCCAAAATGTAAATCAGTATTCGAAACATCcacGGATTATGAAGATCATATGCAGAAAGTACATCAAGGACATGACTTCAATTGccagttttgtgataaaacatttgGAACAAGACTGGCTCTTGGAGTCCACATTTCAAGGAAGCACACTCAAGaaaaattctTCTGCAACCAATGCGCATTTAGCTATTCTTCAGAAGAGTTGTTGAAAAATCACCAAGACACAGTACACACGGACATACCTTGCGGACAATGTGGCAttgtactgaaaaatgtacgaAATTACACGTTGCATCAGAGAGTAGTTCATGAAAGGGAGAAGCGATTCTTCTGTAAATACTgcaaaaaaggatttttcaagaattgtgATGTTATTGCACACGAACAATCGGTTCATCTTAAAGTTAAGAGATTTAAGTGCGATTTATGCCCTTACGAAGCTGTTTACAAGGGCTCCTTTACGGTGCATATGAGAGCTCATCGCAATGAAACGCCCTATGAGTGTCATCTTTGTGGTCGAGGTTTCCGGAAAAATGCGTCCTTATTAAGCCACATTAAACGACATCAAAATATAAGAGAtttcAAATGTCCGATCGAGGGATGTGAATACGCATATGTAGAAAAAGGGAATCTTAATTTACATCTTCGTCTAAAGCATCCTAACGGCGAGCCAGCTCCAGCAAATCAAACACGGCGATCCGGGTTAACTCGATCATACTTTAATGTCCCCAAAACGGATGTTTTTATTGATGATGACGACGGTTTAAATTTTGGCTCTGATGAAGAGCCACCGGCCAAAACTATGAAGagaaaaaattctgaagaaagtGATCCCGATGATCCCGTCGCCCATGTCCTGAAGGAGCAAGACTCAGAGCCTGCTGTAATTGTGAGGCGCAATACAAACGATCACGATTATATCGTGCATGGGAATAATTATGGAAGTGTTATGGAGGACTGCCAAGTAGCAGAAGTCGAGGTTACTTCTAATGATTAG
- Protein Sequence
- MTSKKDLITKSMELPKCIRCFCDLFDDFQLIFDDTGLELELQKLLSVCFDMDIKIRLGEIQALCEDCLNELIDTYDIIQKNEQEGAGPSRNLIPSTTIKKENDPPLESSDSNDFGDFSDEEIAQKSSRKRGNTEKKGIKVKESNNLKEKHAQRVVKQDTRTSKTVELEVEDEDSLEEINTASETYDVNQWDDENLNLETAEKDDDDSEEFNQIDYLEDFDEEIDFNEYKGRVIQSKFSDVCFPEEIKCRLCDSGVKTHIDLMKHTMEMHCVEEFAYPCIVDAGCESLSSQEHLTLHLVFKHYDLNSLAIYSKCPECEKRFSDFASFNKHSCYQPPGKLSRTRVDCDECGKVFKTNKRYRFHLQFHLEKRRPKACFICETLFRDEDEFFEHVMYHHEKSLDFVCIRCDRYYTSAETFKNHQESHKNERKYVCKLCPKTYTYKHFLSDHMITDHDAKSDFKCHICGKYWINKTYLKNHLLTHNKPKPTEVICCNECGFVAVDEAEAEAHLEEHEDKDIHTVTEILDRVYLCEYCELPYSSPNYLKEHRILHSKKQFHCTICSTIFEEYKLFKMHKSLHPEYVKRKKTFTVAHYFVCDNSGCSKSFLQWATLKQHKKVHDNNLKCPKCKSVFETSTDYEDHMQKVHQGHDFNCQFCDKTFGTRLALGVHISRKHTQEKFFCNQCAFSYSSEELLKNHQDTVHTDIPCGQCGIVLKNVRNYTLHQRVVHEREKRFFCKYCKKGFFKNCDVIAHEQSVHLKVKRFKCDLCPYEAVYKGSFTVHMRAHRNETPYECHLCGRGFRKNASLLSHIKRHQNIRDFKCPIEGCEYAYVEKGNLNLHLRLKHPNGEPAPANQTRRSGLTRSYFNVPKTDVFIDDDDGLNFGSDEEPPAKTMKRKNSEESDPDDPVAHVLKEQDSEPAVIVRRNTNDHDYIVHGNNYGSVMEDCQVAEVEVTSND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717989; iTF_01461355; iTF_01184013; iTF_00936756; iTF_00937503;
- 90% Identity
- -
- 80% Identity
- -