Dtit042788.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000011.1:521885-536878[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.26 1.5e+04 -3.5 5.0 30 100 83 137 66 147 0.47 2 4 0.41 2.4e+04 -4.1 0.4 58 80 181 201 170 206 0.68 3 4 2.6e-109 1.5e-104 351.2 31.3 1 300 216 511 216 511 0.93 4 4 0.093 5.4e+03 -2.0 4.6 123 167 512 556 510 577 0.64
Sequence Information
- Coding Sequence
- ATGGTTGCAGGGCCGAAATTCACCATCAGCGAGAGCTGGACCGGTTTCGATCGTTGTAAAAGGTCGACGTCGTTGGCCGATTGTTTGCCGGAAATAGGAAGTCCCATCAAGCACGTGCTGTTCATCTCGAACGTGCCGATATGCAAGAAAGTCTATGGAAGATGTTCAGCTGGCTTTTATCAATACGCAACTTTGAAGATGGAACGTAGCGATAGCGTTGACTCCTTGGAGGATCTATTGAACGATCTAAACGATGATAGTGATGAGAGTTTTACGGAAAAAGTGACTAGTGAAAAGAAAGTGAAGTCTACCGGGACTAAAGAACATAGAAAAACGATTCAAGAATCGAAAGAAGGCAGCGAACGGGATGAAGCCAAAATTCAAAGCCACGAAACAAACCAGGACTTTGAGAAAGCGTCGACTCCATCGGACCCAGCGCAGTGTATCAATCCGAACGTAAGCTGTGATATTTCTAACGTTGAGCAACAAGGAGTTAAGATCCTGCTGGAAGGTGTGACTGAAAGTGAATCAAGCGATTACGCTACGCCTAGCAAGGATCAGCTCAAATCCAGCAGGAGTCATAGCCTCTCCTCGCACCTCGAAGAGGACGTTATCAATCAATTTTTGGATAGAACTACCGAAGACGCCGAGGCGCGTATGCTAGCTAAGAGACAAGCACGCGCCGAAGCTAGGGAAATTCGTATGCGAGAATTGGAACGACAGCAGAAGGAACAGGAGGAAAATGCCGACAGACAGTTCGATATGCTATCGGAACCAATCGCCAGGCCGACTCGAGCCACCGGTTCCAGATACCTCTCTAGCAGGAGGAGTTCCGAAGACTCCCTGGAGGATAGCGGTAGTCTTAGAGAATTACGACATGAACTTAAAGAAGTGGAGGAGAAGTTCCGAAAGGCGATGGTGGCCAATGCCCAGCTCGACAACGACAAGGCGGCGCAGACATATCAATTGGAGCTACTTAAAGATAGGTTAGAGGAATTAGAAGAAGAACATTCGCAGTTGAAACGCGAACATAAAGACAAGTGCAGAGAGCACGACCAGCTGAAGCGGCTGTCGGCTCGTCTAAAGGAGGAATTGGCTGTGACGAAGGCTGAACTGGAGGAGCGAGATAGGTTAATAACGGAGAAGGGTCTGGTGATCGTCGGCGATGATTCGTTGTGCGAGGAGCCGTCGTCGGATGGGGCTGTGAACGGTTTGGGGACGCCTAAGAAGGCTCTGGTTAGCGTTGAGAACGCGCAATTGTTGGATGCGGTCGGTGAGGGTAGCTTAGATGTTCGGCTGGGCAAATTCGCGAAAGAGAAGAGCGAACTTCAAGATCAAATTAGTCATTTGAAATTGGAACTGGAGGAAGAACGAAGCAAGCGGCGGAAATCGAACGCTTCTGGTGGTGGTATCACTTCCAATGGGCCGACGTCCGACGCCGACTACGATGCTGCAGATATACAAAGGGAAGTCAGCAAACAGTTGGCGGAATACAAGTTTCGCTCGCAGAAAGCTGAGCAGGATGTGGCCACGTTACAGGCGACGGTCGCCAGATTAGAAAGTCAAGTGATTAGATATAAGTCGGCCGCCGAGGTTTCGGAAAAATCCGAGGAGGCTCTGAAAGCGGAGAAACGAAAATTGCAAAGAGAGGCACGGGAAGCAATGAATAGGGCCGAAGAGCTCGAAACGTCAAATACGCACTTACTTAAGCGACTAGACAAATTGAAAAACGCAAAATCAACTTTGTTAAAGGAACTTTGA
- Protein Sequence
- MVAGPKFTISESWTGFDRCKRSTSLADCLPEIGSPIKHVLFISNVPICKKVYGRCSAGFYQYATLKMERSDSVDSLEDLLNDLNDDSDESFTEKVTSEKKVKSTGTKEHRKTIQESKEGSERDEAKIQSHETNQDFEKASTPSDPAQCINPNVSCDISNVEQQGVKILLEGVTESESSDYATPSKDQLKSSRSHSLSSHLEEDVINQFLDRTTEDAEARMLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPIARPTRATGSRYLSSRRSSEDSLEDSGSLRELRHELKEVEEKFRKAMVANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHKDKCREHDQLKRLSARLKEELAVTKAELEERDRLITEKGLVIVGDDSLCEEPSSDGAVNGLGTPKKALVSVENAQLLDAVGEGSLDVRLGKFAKEKSELQDQISHLKLELEEERSKRRKSNASGGGITSNGPTSDADYDAADIQREVSKQLAEYKFRSQKAEQDVATLQATVARLESQVIRYKSAAEVSEKSEEALKAEKRKLQREAREAMNRAEELETSNTHLLKRLDKLKNAKSTLLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01498886;
- 90% Identity
- iTF_01120874;
- 80% Identity
- -