Druf000760.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947859195.1
- Location
- OX401908.1:1410851-1423450[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.065 1.2e+03 -1.5 0.7 233 281 59 110 53 113 0.56 2 3 4.4e-77 8.3e-73 245.3 23.6 1 270 128 392 128 411 0.90 3 3 1 1.9e+04 -7.6 15.8 1 48 412 458 412 485 0.65
Sequence Information
- Coding Sequence
- ATGGTGCATCGGTCCGAGATGGCCACGCCTGACAATAGCGACGAGGAGAGCGGTGACGCCTTCACCGACGGTGATTTTGGAGATTCTGATGATGAAACCATAGTGGAGCGTGGTGATGAAGCCAAACCTTCGCTTATTCCCCTCAACGAAACCGTCAACGAAGAAGTGCAGAAAACAAATCTAACAACTAACGGCCATTCTCTCGGTAATGGTTTAGATGAAAAGCAGAATGAGCCACCTAAACTTAATGGACGAAAATATAGTGAGAATCAATCAAGTGACGTAGAGAACCAGAGTTTTGTTATATCGGATCTACGGAGAGACTCTCACAGCGAACAAAATCCTTCCATAGTTGGAATTCTCGGCGATCAACAAAACCACGCAGAGCAGCGGCTGGCGGCGCGGCGCGCGGCTCGAGCGGAGGCGCGTGAGATACGCATGCGCGAGCTAGAGAGGCAGCAGCGCGAGCAGGAGGACCATGCCGACAAGGCGTACGACATGTATGCAGAGACGGTGGGCCGGCGCGGCGGCACGCGGCTGGCGTCGCTGGGCCCGGTCGGCGTGCACTCGCCGCGCCGCAGCTCCGAGGACTCGGCCGACGACACCTTCAGCGTCAAGGAGCTTAGGCACGAGTTGAAGGAGCTCGAAGAGAAGTTCCGGAAGGCGATGATCCTGAACGCGCAAATGGACAACGACAAGGCGGCGCTCGGCTACCAGCTGGAGCTGCTCAAGGACCGCATAGAGGAGCTCCACGAGGAGCACGTCCAGCTGCAGCGCGAACACCGGGAGAAATGCTCGTCGTACGAACGTTTAAAACGCGAGCACGAGTCGGTGACGCGCGAGCTGAGCGCGGCGCGCGACGCGGTGCGCGCGCGCGACGCGGCGGCCGCGGCCGCGGGCTTCGCGTTCGTGGACGCCGCCGAGCTGGACGCCGCGCACGCCGCGCACGAGCCGCACGTCGGCGCCGTGCCGCCGCTCGCGCTCGTCTCGCACTCCGCGGAGAAACTGCTCAACGACGCCGGCGAGGGCACGCTAGACGTCCGGTTGCAGAAGCTGCTGAGCTCGAAGCAAGGGCTGGAGTCTGAGGTGCGCAAGCTGAAGCTGCAGCTGAACGAGGAGCGCGCCGCGCGGCAGAACGGCGTCGCGAACCATCACGACGACGAGTACGAGAATGAAATGGAATCGCTGCGCAAGTCGTGCGGCGAGGCTCGTGCGCGGGCGGCGCGCGCCGAGGCGGAGGCGGCGCTGCAGGCGGGCCAGCTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGCCAGGACCACCAGGACGACCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGAGAGGCTCGAGAGGCCCTCAACCGAGTGGAAGAGTTGGAGACGGAAAACAGCCACCTGACGAAACGACTCGACAAGCTCAAGAACGCCAAGTCCGCGCTTCTAAAGGACCTGTGA
- Protein Sequence
- MVHRSEMATPDNSDEESGDAFTDGDFGDSDDETIVERGDEAKPSLIPLNETVNEEVQKTNLTTNGHSLGNGLDEKQNEPPKLNGRKYSENQSSDVENQSFVISDLRRDSHSEQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRGGTRLASLGPVGVHSPRRSSEDSADDTFSVKELRHELKELEEKFRKAMILNAQMDNDKAALGYQLELLKDRIEELHEEHVQLQREHREKCSSYERLKREHESVTRELSAARDAVRARDAAAAAAGFAFVDAAELDAAHAAHEPHVGAVPPLALVSHSAEKLLNDAGEGTLDVRLQKLLSSKQGLESEVRKLKLQLNEERAARQNGVANHHDDEYENEMESLRKSCGEARARAARAEAEAALQAGQLARLEAQVARLRARQDHQDDHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00907905;
- 90% Identity
- iTF_01073634;
- 80% Identity
- -