Dpha020069.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000088.1:816007-825789[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.45 34 5.6 0.2 3 23 121 141 119 141 0.96 2 14 0.0017 0.13 13.3 2.8 1 23 237 259 237 259 0.99 3 14 7.8e-06 0.0006 20.6 0.6 1 23 265 288 265 288 0.97 4 14 0.03 2.3 9.3 4.7 1 23 293 316 293 316 0.94 5 14 1.4e-05 0.0011 19.8 0.4 2 23 457 478 456 478 0.97 6 14 0.0017 0.13 13.3 2.0 1 23 484 506 484 506 0.98 7 14 0.13 9.9 7.3 0.1 1 23 601 623 601 623 0.97 8 14 0.0027 0.2 12.6 4.3 1 23 629 651 629 651 0.95 9 14 5.2e-05 0.004 18.0 0.5 1 23 657 679 657 679 0.96 10 14 0.00033 0.025 15.5 3.0 1 23 688 710 688 710 0.99 11 14 0.00022 0.016 16.1 0.8 2 23 757 778 757 778 0.97 12 14 0.014 1.1 10.4 5.7 1 23 795 817 795 817 0.95 13 14 2.3e-06 0.00018 22.2 0.7 1 23 823 845 823 845 0.98 14 14 5e-07 3.8e-05 24.4 3.1 1 23 851 874 851 874 0.98
Sequence Information
- Coding Sequence
- ATGAATATCAATGTAACAGAAGTAGATCCTCTAAGCTCTCAATCCCAATACAGTTTAAATCAGTTTCACAATTTTGAAAGTTACGATACTTTGCACTACGGTGAACACGGCCCTTATCCGTACACGCTCAATTTAGAACAATATCAAAacgcatataatttatatacaaaaccaAATTTGAACGATAAAAACAGACAGGAAAGTTCTAACAATGATATTATTCAAACAAAACACGTTAACAAAGAGGAAAAAGTCACAGATAACACAGATCCACCGAATATTGGtaaacagaaaattaaaaaagaaaggaGTAAATACTTTTCCGAGAAAATAACGGAGAAAGATTATCCTTTCTACGGGTGCGCTCTATGCAATGTGTCATATCAAAACTTACACGAGCTGGACACTCACGTTCTAATACACAAAGAGAGGGTGACAAGTTACGATTTAAGAATAAAGAATCAAATTAAGaagcgtaaattaaaaaaagaaatgaaaagaaataagaaattaaaaaaaataaaatcagaaGCTCCGttagaaattgaaattaaacccGAAGAAGGGTACATAGGTAGTGAAAAAGCATCAGATTTCATCAACAACACAGAATCCGATAATCAAAGTTCGAAGGAAAACCACGGCAACACAAAAACGGAGAAAAAGAAAGCTGCGGATAGTTCAAAAGATGAGGagttacagaaaatatataaatgttttgcgTGTCAAAAGCAGTTTAcgttaagttattatttaaaacttcatGTTAGATCTCATACagATGAAAAACCCTACACATGTCCCGAGTGCGGGCAATCTTTCATAACGGCTAGTAAATTGGGACGGCACAATAAGAGGTTTCATTTGGAAATAAGATATCAGTGTAGGATATGTTATAGGTATTTTTCCCGATTCGAATTCCTCACCCGTCATTTCGATAAAAAGCATCCCGACGACAAACTGGAGGGAGAGCCGTATGATTACAACGCGATATTGCCATATTTAAAAGAGCTAGAGGAGCAAATGCGCGAAAAGAAGGAGAAAGAAGCGGAGAGAACGGAGGATGTGTGGCTTCAGAACGGCAAAGAGGTGGAGGACGAGGGGCGCGTTCAGATTGAAGAGATCAAACTACAAATAGAGGAAGTGAAGGTGGACATGGACGTGGAGATCAAGCTGGAGAAAGAGGAATTGCCCGCTGGTGACGCGAACAATGACAGCCTCAATGACGGTGATGGGGTGAAGGACGAGGAGGACGTGAGGGAAGATGGGGATGtAGCGTCGGACGACGACTATTTCCCGTCCAACACGTGGGCCGCAACGCCCAGAATCGAATCCCCACCGTCCCCCAAGAGCAAGCAGGACAAGCTGAAGTGTCCGATATGCGAGAAGAGGGTCAGCACGGTGTCGTACATGCGGGTCCACATGAGGACCCACACCGGCGAGAAGCCGTTCAAGTGCTACATATGCAGCGCCGGGTTCATAACCAGCAGCAAGATGCACCGCCACGTGCTCACGCACCCCGAGTCCTGGAACGAAGACGGAATTAAACCAGAAAAGGAAGATGTCAAATCGGAAACGGAAAAAGATGGCGACGATGACGGCGACGACAGTGATGATAAAAAgccattaaaaaaaatgaaggaaGCCCTGGCGAAGTTCTCCAAAAAGCCGAGGAGTTcagagaagaagaagaagatgtACCAGAAACGGCCTCACGCTTGTGAATTCTGTCACAAACGGTTCTTGCATGTAGAGACTTTACAGGTACACAAAAATTGCCACGAAGGCGAGGAGAGAGTGTACAAATGTAATTATTGCCTCACCGAGCTGGAAAACGAACCTGCACTCAGGTCCCACGAGGTCACCCACGACGGCCCCAAGCCGTATCTGTGCACTATATGCGGTAAATGTTATAAGAAGCGGGAGACCATGATATATCATAGAAAAAATCACAAACCGGATAAGGAATTCATATGCGACATTTGCACTAAATCCTTCAACGCGCAGAATAAACTGCAAAGGCATATTGTAAGCCATAAAGTGGACAAGTATATACTCCGGTACGAGTGTCCGGTGTGCGCGCACATGTTCAACACCAAGTATCACGTGCAAATGCATCTCAACACACACCAGAAGGAGGGGCTAATACAAGAGGAGAACCGCAACGAAATATTGGCGATGTTATTACAGAACGCACgtaaaataccaaaaaagtCGGACACGTCCGCCTCGTTGACGGACATGGTGCCGTCCGACGAGCGCAGCCGGGTGTGCAACATATGCGGGGAGATGTTCCAACATTTCTATTACCTGGAGGAGCATTTGAAGAGTCACGGCTCCAAGATCGCCATAGAGGACAGCGAGAAAATTGAGGAGAAAAagcatatttgtaaaatttgcaATAAAGCCTTTAAACTCCATTATTATCTCAAGTTGCACAGTTTCACGCACACAAAGGAGAAGCCGTTCATTTGTCAACAGTGTGGAAAGGGCTTTATAACGCGCGGCAAACTCAAACGCCACCTGGAGACCCACACTGGCCTGAAAAAATACCAATGTCACATTTGTTACAAGTTCTTCACCAGACCCAGCTATCTGCGTATACACGTGCGGACAATACACGGGACCCAGGATTATAATTTCAGACTGGACAAGCGGTACGGCTTCCCCACGGCGGTGGGTAATGAGTGA
- Protein Sequence
- MNINVTEVDPLSSQSQYSLNQFHNFESYDTLHYGEHGPYPYTLNLEQYQNAYNLYTKPNLNDKNRQESSNNDIIQTKHVNKEEKVTDNTDPPNIGKQKIKKERSKYFSEKITEKDYPFYGCALCNVSYQNLHELDTHVLIHKERVTSYDLRIKNQIKKRKLKKEMKRNKKLKKIKSEAPLEIEIKPEEGYIGSEKASDFINNTESDNQSSKENHGNTKTEKKKAADSSKDEELQKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCPECGQSFITASKLGRHNKRFHLEIRYQCRICYRYFSRFEFLTRHFDKKHPDDKLEGEPYDYNAILPYLKELEEQMREKKEKEAERTEDVWLQNGKEVEDEGRVQIEEIKLQIEEVKVDMDVEIKLEKEELPAGDANNDSLNDGDGVKDEEDVREDGDVASDDDYFPSNTWAATPRIESPPSPKSKQDKLKCPICEKRVSTVSYMRVHMRTHTGEKPFKCYICSAGFITSSKMHRHVLTHPESWNEDGIKPEKEDVKSETEKDGDDDGDDSDDKKPLKKMKEALAKFSKKPRSSEKKKKMYQKRPHACEFCHKRFLHVETLQVHKNCHEGEERVYKCNYCLTELENEPALRSHEVTHDGPKPYLCTICGKCYKKRETMIYHRKNHKPDKEFICDICTKSFNAQNKLQRHIVSHKVDKYILRYECPVCAHMFNTKYHVQMHLNTHQKEGLIQEENRNEILAMLLQNARKIPKKSDTSASLTDMVPSDERSRVCNICGEMFQHFYYLEEHLKSHGSKIAIEDSEKIEEKKHICKICNKAFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRLDKRYGFPTAVGNE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00457406; iTF_00774658; iTF_00782824; iTF_00775448; iTF_00779672; iTF_00782027; iTF_00781206; iTF_00780435;
- 90% Identity
- -
- 80% Identity
- -