Dtak001945.1
Basic Information
- Insect
- Drosophila takahashii
- Gene Symbol
- -
- Assembly
- GCA_018152695.1
- Location
- JAECXN010000107.1:6828749-6835509[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0014 0.084 13.2 0.4 1 23 145 167 145 167 0.97 2 14 4.6e-05 0.0028 17.8 1.9 1 23 374 396 374 396 0.98 3 14 0.85 53 4.4 0.6 1 23 402 425 402 425 0.92 4 14 0.033 2 8.8 0.6 1 23 446 469 446 469 0.93 5 14 0.0011 0.069 13.4 1.9 3 23 732 752 731 752 0.92 6 14 0.045 2.8 8.4 1.4 1 23 758 781 758 781 0.98 7 14 1.3 83 3.7 1.5 2 23 818 839 817 840 0.91 8 14 0.0023 0.14 12.4 0.6 1 23 861 884 861 884 0.97 9 14 0.0019 0.12 12.7 0.5 1 23 1095 1118 1095 1118 0.92 10 14 0.012 0.75 10.2 4.2 1 23 1130 1152 1130 1152 0.98 11 14 4.2e-05 0.0026 17.9 1.7 2 23 1158 1180 1157 1180 0.96 12 14 0.0027 0.17 12.2 3.6 2 23 1187 1211 1186 1211 0.93 13 14 0.1 6.5 7.2 1.5 1 23 1216 1238 1216 1238 0.96 14 14 0.0057 0.35 11.2 0.4 1 23 1244 1267 1244 1267 0.92
Sequence Information
- Coding Sequence
- ATGGCGCTGAACAAGAGGAACAGCACCCACTCGGACGCAATTTCGGGCGCCGAGGTGGTGGACTACAAGTTTTCGTGTCGCTGCTGCCTGAAGACGGACGTGGAGTACCTCAAGCTGGACTCGGTGGCGGTGGCCCGCAGCCTGGATCCGGCGGACGCCGGGGACAAGATTCCGCTCCTCCGCTGCCTGCTCTTCTGCGTGAGCGCCGAGAACGCCCCCGAGCTGCCGCAGTACATCTGCATCGAGTGCAGCAAGAGCCTGCAAGTGGCCTACTACTTCCTCAAGAATGCACTGCGTGCCCACGAGATCCTGTGCCGCAAACTGTGTCCCAAGCGGTCGGCGAGGAGACTTAATGGCTCCTTGGTCCAGGAGCCGCCAAAGCAGGAGCGAGATGAGGACCCGCAGCGGACGAAGCCCCTGAAACCCATGCGGCACGAGTGCCAGGTCTGCGGAGTGGTGGTCTACAATCGCCTGGAGCTCAAGCAGCACATACGACAACATGCAGAGGGCCTTTCGTACAACTGCAAGTTCTGCAACTTCACCACGCTGAAACAGCGCATCTTGCTGGAGCACTACGTAGCCGTTCATGACCTGTCCACTGGCCAGGCGGAGGAGCACCTCAAGTCGAAGGACCTGCCAGCGCACGAGGAAGAGGAAACCAAGGCGGTGTGCACGCTGGAGGACATGGAGCTGCTAATACCCACTGTTCTGACGCCCGAGGACTACGCGCAGCCCCAGCCGCACATTGATTCCGACCAGCTGCGCGACATCGAGCGGCAGCTGGCCGTCAGCATGGGCGAGACGGCGCCGGCGGTGGACACTCTCACCTCCACCCTGCCGCCCATGGACACGCCCAACGTGAGCATCGGCACCGAGTATCTCGTCATGCCCGATGGCTCGCTGCAGCAGGTCAACGGAAGCGGCGTGGTCATAGAGTATATCGATGATAGCAAGCCGAACAATCCCTCCAATGTCAACATCGGCCTACACAATCTCCTGGCCGCCAATGAGCAAGGCGAACCGATGGATATCGATGTCAGCGAGCTGATTGTGGAGGAAACGATGCCGCAGATAAGGGTCAAGCCGAAGCCAACAGCTGGCGGATCGCCCAATTACAAGCACAAGTGCAAAGTGTGTCCCAAGACATTTGCCACTGTGGCGCGGCTCAAATCTCACCAGTTGACCCACAGCAATTTGCCCAAGTTCTTCTGCGACCAGTGCGACTTTTACTCGCTGCGCAGCGCCGATCTCATCCAGCACTACAAGATGGTCCATCGGTCCGATGAGAACGGCAGGAGCGACAAGGAGCCAGCGCAGGCGGAGGAGTCGCGCGTCTTCTCGTGCGACATGTGCCTCTTCGAGACGCGCACCGCCAGTCAGTTGCGGACGCACTACACGGAGGGCCACACGATCCAGCCCACGGAGGTGCAGTTGCGTCCAAGTTGGACTGCCGAGGAGGGGGCGAGCTTTCCCCAAAAACCAGCATCGATTGGCGTTTCTCCTAGGAAACTGACGCCCGCCAAGAAATCAAATCACACCGACATCCCAGTGGGCATTAAATATCCGCCAGTTGTTGTGGAAGCACAGGTACCAGTGCACCAGCCAGCGCCAATGGCCACCACATCGACGACCATCACGGAAACAGGCGACATCAACGTGGTGGTGGATGCTACCCCGCTGTTCTATGCAGCAACCTCCACGGTGGCAACGAATCCAGTCCCAGTGACAACGGCGGTGGAACCATCAACCGGGGAGGCCGACAGCAATGCATTCGGAATCTTTCCCGAAATCCCAGAGAGCAATCTGCCCGTGAACGAGGCCGTTCCGCAAGTGGCAGCCAACACTTCCAACATTTCGATATTTGGCGACATGCAGGATTTCATCGACAACACAGACGTGGCCGCCATTTGCACCATACCCGCGGATGATATGCCCGTGGTGGATGGTGATGACATTGTGATCGATAATAACAACATCAGTCTGGACTTTGACGCCGAGAATTTGTTTGAGGACTTCGAGGAGGAGGAGGATGCGGTGGGCGAGGAGGAGGAGGAGGAAGAGGACGAGGCGGACAACGATGACGAGAATGACAACAATGATGCTGCCACGGACCAGAATCTGCTTCTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATCGAAGCATCTGCAGAAGCCCTACTGCATTTACTGCAACAAGAAGTTCACCAGCCAGTATAAATTCGAGAACCACATGTTTGTCCATCGGGGCCTGGCCCCCTATCGCTGTGAGCTGTGCACCAACCTATACAACATGAAGCGATTGCTGATCAGGCACTATAAAACTGTGCACAAGCGAATGCCCACGAGGGACATGGTCCAGGCCAAGGGCGATAAGGTTTCCGTGGCCCGCACCAACATCGAGAAAATCTATCTTGGCAAAGTGAAGAAACCAATGCTCATGTGCGCTAAATGTCCGTTCGAGTGCGACTCAGATGCGGATATGCGGAAACATCTGAACGCCCACCACGGCATTAATGACGGAGTGTCTGTCCACGCCAATGAAGTGTTTATTATACGCAAATTACCCTTCGAATGCCCGCGCTGCATTCGATCTTTTGCGGCCAAAAGCACCCTCAGTCGCCACCTGCAGCGCAGCCACTTGGTGGACACGATTATAGAGATGCAAACGCCGCAGTCGGCGGAAAGCACCACAGTAACCCTGGGCACATCATCGTCAACAGGCCCCGGGCCAGAGAACCCAGTCTTGGAGGCAAACAAACATAATGAGATGATGCAGACGGACGGTGGGGCTGAGAGGATGACAACGGCGGCTTCAGGCAATGGCGGTGGCAATGAAGCAGCAGGCAAAGATGATGGATCAGGAAAGAGTGGAAAAATGGATGCGGCAGTGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTCCCCACACCCACACCGTTTGATTACGAATATGACTTTATGGGCGATGCAGCCCAGCGATCCACGCCCAATCCCCACGCCATTCCCAAAGCCCCCAGCACGGATGCCCCACCCAGCAGTTTGCTCAACGGCAGCGACAAGCTGCTGACCACCGCCGCCCTGGCTGCGTCGCCAGTGAAGGGTCTGCGCTCCAACTCCCGGCTGCTTCGCACTTCCACCTACATGTGCAAGCTGTGCAACAAGACCTTCGACGAGCTGGGCAAGCTGGTCAAACACGAAATGGACCAGCACTCCAATACTGAGCCTTCGCGGTGGGGCTACCAGCACAAGTGTGCCATCTGCAATACAACGTACCGAACGCTCACGCTGCTAAAGTTCCACATGAAGCGGCACGGCGGCCGGAAATCACAGTGCAAGCTGTGCCCCAAAACCTTTGTGACCACCACCGAGCTGGAGCGGCACACGAAGTCCAAGCACGGCAAGGAGAAGACGCTGCGATGCACGCTGGATGGCTGCCGCAAGACGTTCGCCTTCAAGCATCATTTGGTGAGACATCAGAACGCCACGCACTTGAACACGCGGCACATATGCCCCGTTTGCAAGGAGGAGATGCAGTCCAGCCTGCATCTCAGGAACCATATGAGCGTGCATAAGGGCCCGCTGACCTACAAGTGTCCCAAGTGCGACCGCTCCTATTTGCGGCGTGGAAGACTCCAGAGCCATGCTCTCTTGATCCACAAGATCCGGCTGACCACAGAGGACTTAGCTGACATCTCTTCACAGTCTGGGGGGCTTACCAATCCGCATGATCTGAAGGAATCATATTGCAATAAGGATGTCGATGGCGAAATGGAAATAAAGGACGAGCCGGCAGCTGCAGCCGATAATTCCAAATAG
- Protein Sequence
- MALNKRNSTHSDAISGAEVVDYKFSCRCCLKTDVEYLKLDSVAVARSLDPADAGDKIPLLRCLLFCVSAENAPELPQYICIECSKSLQVAYYFLKNALRAHEILCRKLCPKRSARRLNGSLVQEPPKQERDEDPQRTKPLKPMRHECQVCGVVVYNRLELKQHIRQHAEGLSYNCKFCNFTTLKQRILLEHYVAVHDLSTGQAEEHLKSKDLPAHEEEETKAVCTLEDMELLIPTVLTPEDYAQPQPHIDSDQLRDIERQLAVSMGETAPAVDTLTSTLPPMDTPNVSIGTEYLVMPDGSLQQVNGSGVVIEYIDDSKPNNPSNVNIGLHNLLAANEQGEPMDIDVSELIVEETMPQIRVKPKPTAGGSPNYKHKCKVCPKTFATVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKMVHRSDENGRSDKEPAQAEESRVFSCDMCLFETRTASQLRTHYTEGHTIQPTEVQLRPSWTAEEGASFPQKPASIGVSPRKLTPAKKSNHTDIPVGIKYPPVVVEAQVPVHQPAPMATTSTTITETGDINVVVDATPLFYAATSTVATNPVPVTTAVEPSTGEADSNAFGIFPEIPESNLPVNEAVPQVAANTSNISIFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDAVGEEEEEEEDEADNDDENDNNDAATDQNLLLTXXXXXXXXXXXXQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKIYLGKVKKPMLMCAKCPFECDSDADMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKSTLSRHLQRSHLVDTIIEMQTPQSAESTTVTLGTSSSTGPGPENPVLEANKHNEMMQTDGGAERMTTAASGNGGGNEAAGKDDGSGKSGKMDAAVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFPTPTPFDYEYDFMGDAAQRSTPNPHAIPKAPSTDAPPSSLLNGSDKLLTTAALAASPVKGLRSNSRLLRTSTYMCKLCNKTFDELGKLVKHEMDQHSNTEPSRWGYQHKCAICNTTYRTLTLLKFHMKRHGGRKSQCKLCPKTFVTTTELERHTKSKHGKEKTLRCTLDGCRKTFAFKHHLVRHQNATHLNTRHICPVCKEEMQSSLHLRNHMSVHKGPLTYKCPKCDRSYLRRGRLQSHALLIHKIRLTTEDLADISSQSGGLTNPHDLKESYCNKDVDGEMEIKDEPAAAADNSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00602844; iTF_00605061; iTF_00581758; iTF_00536998; iTF_00548302; iTF_00578770;
- 90% Identity
- -
- 80% Identity
- -