Basic Information

Insect: Drosophila pseudotakahashii
Gene Symbol: -
Assembly: GCA_035046095.1
Location: JAWNOE010000266.1:816627-822485[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0014 0.12 13.2 0.4 1 23 145 167 145 167 0.97

2 14 3e-05 0.0025 18.4 2.7 1 23 374 396 374 396 0.98

3 14 0.52 44 5.1 0.7 1 23 402 425 402 425 0.93

4 14 0.045 3.8 8.5 1.0 1 23 446 469 446 469 0.93

5 14 0.0012 0.1 13.4 1.9 3 23 733 753 732 753 0.92

6 14 0.047 4 8.4 1.4 1 23 759 782 759 782 0.98

7 14 1.4 1.2e+02 3.7 1.5 2 23 819 840 818 841 0.91

8 14 0.0025 0.21 12.4 0.6 1 23 862 885 862 885 0.97

9 14 0.0019 0.16 12.8 0.4 1 23 1094 1117 1094 1117 0.92

10 14 0.013 1.1 10.2 4.2 1 23 1129 1151 1129 1151 0.98

11 14 1.1e-05 0.0009 19.9 1.6 2 23 1157 1179 1156 1179 0.96

12 14 0.0035 0.3 11.9 3.9 2 23 1186 1210 1185 1210 0.92

13 14 0.062 5.3 8.0 1.5 1 23 1215 1237 1215 1237 0.96

14 14 0.0087 0.73 10.7 0.3 1 23 1243 1266 1243 1266 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0014	0.12	13.2	0.4	1	23	145	167	145	167	0.97
2	14	3e-05	0.0025	18.4	2.7	1	23	374	396	374	396	0.98
3	14	0.52	44	5.1	0.7	1	23	402	425	402	425	0.93
4	14	0.045	3.8	8.5	1.0	1	23	446	469	446	469	0.93
5	14	0.0012	0.1	13.4	1.9	3	23	733	753	732	753	0.92
6	14	0.047	4	8.4	1.4	1	23	759	782	759	782	0.98
7	14	1.4	1.2e+02	3.7	1.5	2	23	819	840	818	841	0.91
8	14	0.0025	0.21	12.4	0.6	1	23	862	885	862	885	0.97
9	14	0.0019	0.16	12.8	0.4	1	23	1094	1117	1094	1117	0.92
10	14	0.013	1.1	10.2	4.2	1	23	1129	1151	1129	1151	0.98
11	14	1.1e-05	0.0009	19.9	1.6	2	23	1157	1179	1156	1179	0.96
12	14	0.0035	0.3	11.9	3.9	2	23	1186	1210	1185	1210	0.92
13	14	0.062	5.3	8.0	1.5	1	23	1215	1237	1215	1237	0.96
14	14	0.0087	0.73	10.7	0.3	1	23	1243	1266	1243	1266	0.93

Sequence Information

Coding Sequence: ATGGCGCTGAACAAGAGGAACAGCTCCCATTCGGACGCAATTTCGGGCGCCGAGGTGGTGGACTACAAGTTTTCGTGTCGCTGCTGCTTGAAGACGGACGTTGAGTACCTCAAGCTGGACTCGGTGGCGGTGGCCCGCAGCCTGGATCCGGCGGACGCCGCGGACAAGATCCCGCTCCTCCGTTGCCTGCTCTTCTGCGTGAGCGCCGAGAACGCCCCCGAGCTGCCGCAATACATCTGCATCGAGTGCAGCAAGAGCCTGCAAGTGGCCTACTACTTCCTCAAGAATGCACTGCGTGCCCACGAGATCCTGTGCCGAAAGCTGTGTCCCAAGAGGGCCGCGAGGAGACTTAATGGCTCTTTGGTTCAGGAGCCGCCAAAGCCGGAGCCAGAAGAGGACCCACAGAGGACGAAGCCTTTGAAAACCATGCGGCACGAGTGCCAGGTGTGCGGAGTGGTGGTTTACAATCGCCTGGAGCTCAAGCAGCACATACGACAACATGCAGAGGGCCTTTCCTACAACTGCAAGTTCTGCAGCTTCACCACGCTGAAACAGCGAATACTGCTGGATCACTATGTAACCATTCATGGCCTGTCTACTGGCCAGGCGGAGGAGCACATCAAGTCGAGGGACTTGCCAGCGCACGAAGAGGAGGAATCCAAGGCGGTGTGCACGCTGGAGGACATGGAGCTGCTAATACCCACTGTTCTGACGCCGGAGGACTACGCACAGCCCCAGCCGCATATTGATTCCGATCAGCTGCGCGATATCGAGCGGCAGCTGGCCGTCAGCATGGGCGAGACGACGCCGGCGGTGGATACTCTAACCTCCACCTTGCCGCCCATGGACACGCCCAACGTGAGCATCGGCACCGAGTATCTCGTCATGCCCGATGGCTCGCTGCAGCAGGTCAATGGAAGCGGCGTGGTCATAGAGTATATCGATGATAGCAAGCCGAACAATCCCTCCCATGTCAATATTAGCCTACACAATCTCCTGTCCGGCAATGAGCAAAGTGAACCGATGGATATCGATGTCAGCGAGCTGATTGTGGAGGAGACGATGCCGCAGATAAGGGTCAAGCCAAAGCCAACAGTTGGCGGATCGCCCAATTACAAGCACAAGTGCAAAGTGTGTCCAAAGACATTTTCCACTGTGGCGCGCCTCAAATCTCACCAGTTGACCCACAGCAATTTGCCCAAGTTCTTCTGCGACCAGTGCGACTTTTACTCGCTGCGCAGTGCCGATCTCATCCAGCACTACAAGACGGTCCATCGCTCTGATGAGAACGGCCGAAGCGACAAGGACCCAGCTCAGGCGGAGGAGTCACGTGTATTCTCGTGCGACATGTGCCTCTTCGAGACGCGCACCGCCAGTCAGTTGCGGACGCACTACACGGAGAGCCACACGATCCAGCCCACGGAGGTGCAGTTGCGTCCAAGTTGGACCGGAGAGGAGGGCGCAAGCATTCCTCAAAAACCCGCATCGATTGGCGTTGCTCCCAAGAAGATGCCGCCGGCCAGGAAATCAGATCACACCGACATTCCAGTGGCCATTAAATATCCGCCAGTTGTTGTGGAAGCACAGGTACCTGTGCAACAACCCGCGCCAATGGCCACAACATCAACGACCATCACGGAAGCAGGCGACATCAACGTGGTGGTGGATGCTACCCCGCTGTTCTACGCGGCAACCTCCACCGTCACAACGAACCCAGACCCAGTGACAACGGTGGTGGAGGAACCATCAACCGGGGAAGCCAACACCAAtgcatttgaaatttttcccGAAATCCCAGAGAGCAATGTGCCCGTGAACGAGGCCGTTCCGCAAGTGGCAGCCAATACTTCCAACATTTCAATGTTTGGCGACATGCAGGATTTCATTGACAACACCGACGTGGCCGCCATATGCACCATACCCGCAGATGATATGCCCGTGGTGGATGGGGATGATATTGTGATCGATAATAACAATATCAGTCTGGACTTTGATGCCGAGAATTTGTTCGAGGActtcgaggaggaggaggatgcggCGGGCgaagaggaggaagaggaagaggacgAGGCGGACAACGATGACGAGAATGACAACAATGATGCTGCCACGGATCAGAATCTGCTGCTAACCAGCGACGACGATGATGTGGACGACTTTGATGACGAGCAATCAAAGCATCTGCAGAAGCCTTACTGCATTTACTGCAACAAGAAGTTCACCAGCCAGTATAAATTCGAGAACCACATGTTTGTCCATCGGGGCCTGGCCCCCTATCGCTGCGAGCTGTGTACCAACCTATACAACATGAAGCGACTGCTGATCAGGCACTATAAAACTGTGCACAAGCGAATGCCCACGAGGGACATGGTCCAGGCCAAGGGCGATAAGGTTTCCGTAGCCCGCACAAACATCGAGAAAATCTATCTTGGCAAACTGAGGAAACAAATGCTCATGTGCGCCAAATGTCCGTTCGAGTGCGACTCAGATGCGGATATGCGGAAACATCTGAATGCCCACCACGGCATTAATGACGGAGTGTCTGTGCATGCCAACGAAGTGTTTATTATACGCAAATTACCCTTCGAGTGCCCGCGCTGCATTCGATCTTTTGCGGCCAAAAGCACCCTCAGTCGCCACCTGCAGCGCAGCCACTTGGTGGACACGATCATAGAGATGCAAACGCCGCAATCGGCGGAAAGCACCACAATAACACTGGCCACATCGTCGTCAACAAACCCCGGGCCAGAGAACCCGGTCTTGGAGGCAAACAAACATAGTGAGATGATGCAGACGGACGGTGGGGCTGAGAGGATGACAACGGCAGCTTCAGGCAATGGCGGTGGCAATGAAGTAGCAGGCGAAGATGATGGATCaggaaaaattggaaaaatggaACCGGCAGTGCCAGAGGAAGAACTTGATCCAGTTACATTGGACGCTGCCACAGCGGTGACTACAACAGCAATAGCAGCAGCAATaacggcggcagcagcagcggcagctaCATCGTCCGAATCGCCCATCACAACCACAGCCTCATCGACAAATTCCACCCTCTTCCCCACACCCACACCGTTTGACTACGAATATGACTTTATGGGAGATCCAGCCCAACGATGCACGCCCAATCCCCATGCCATTCCCAAAGCCACCAGCACGGACGCCCCACCCAGCAGTTTGCTCAACGGCAGCGACAAACTGCTGACCACCGCCGCCCTAGCTGCATCGCCAGTGAAGGGACTGCGCTCCAACTCCCGTCAGCTTCGCACTTCCACCTACATGTGCAAGCTGTGCAACAAGACCTTCGACGAGCTGGGCAAGCTGGTCAAACACGAAATGGATCTGCACTCCAATACTGAGCCATCGCGGTGGGGCTACCAACACAAGTGTGCCATCTGCAATACGACGTACCGAACGCTCACTCTGCTCAAGTTCCATATGAAACGGCACGGCGGCCGGAAATCACAGTGCAAGCTGTGCCCCAAAACCTTTGTGACCAACACGGAGCTGGAGCGACACACGAAGTCTAAGCACGGCAAGGAAAAGACTCTACGATGTACGCTGAATGGCTGCCGGAAGACGTTCGCCTTCAAGCATCATTTGGTGCGACATCAAAACGCCTCGCATTTGAACACACGGCATATATGCCCCATTTGCAAAGAGGAGATGCAGTCCAGTCTACATCTGAGGAATCATATGAGCGTGCATAAGAGCTCGGTGACCTACAAGTGTCCCAAGTGCGACCGCTCCTATTTGCGGCGTGGAAGaCTCGCAAGCCATGTTCTCTTGATCCACAAGATCCGGCTGACCACAGAAGAGTTGGCTGGCATCTCTTCACAGTCTGAGGGCCTTACCAATCCGCACGATCTGAAGGAAATGACGACCGGGGGGCAAAGTCCCTGTTGCAATAAGGATGTCGATGGCGAAAAGGAAATAAAGGACGAGCCGGCCGTTGCAGCCGATAATTCCAAATAG
Protein Sequence: MALNKRNSSHSDAISGAEVVDYKFSCRCCLKTDVEYLKLDSVAVARSLDPADAADKIPLLRCLLFCVSAENAPELPQYICIECSKSLQVAYYFLKNALRAHEILCRKLCPKRAARRLNGSLVQEPPKPEPEEDPQRTKPLKTMRHECQVCGVVVYNRLELKQHIRQHAEGLSYNCKFCSFTTLKQRILLDHYVTIHGLSTGQAEEHIKSRDLPAHEEEESKAVCTLEDMELLIPTVLTPEDYAQPQPHIDSDQLRDIERQLAVSMGETTPAVDTLTSTLPPMDTPNVSIGTEYLVMPDGSLQQVNGSGVVIEYIDDSKPNNPSHVNISLHNLLSGNEQSEPMDIDVSELIVEETMPQIRVKPKPTVGGSPNYKHKCKVCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQHYKTVHRSDENGRSDKDPAQAEESRVFSCDMCLFETRTASQLRTHYTESHTIQPTEVQLRPSWTGEEGASIPQKPASIGVAPKKMPPARKSDHTDIPVAIKYPPVVVEAQVPVQQPAPMATTSTTITEAGDINVVVDATPLFYAATSTVTTNPDPVTTVVEEPSTGEANTNAFEIFPEIPESNVPVNEAVPQVAANTSNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISLDFDAENLFEDFEEEEDAAGEEEEEEEDEADNDDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKIYLGKLRKQMLMCAKCPFECDSDADMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKSTLSRHLQRSHLVDTIIEMQTPQSAESTTITLATSSSTNPGPENPVLEANKHSEMMQTDGGAERMTTAASGNGGGNEVAGEDDGSGKIGKMEPAVPEEELDPVTLDAATAVTTTAIAAAITAAAAAAATSSESPITTTASSTNSTLFPTPTPFDYEYDFMGDPAQRCTPNPHAIPKATSTDAPPSSLLNGSDKLLTTAALAASPVKGLRSNSRQLRTSTYMCKLCNKTFDELGKLVKHEMDLHSNTEPSRWGYQHKCAICNTTYRTLTLLKFHMKRHGGRKSQCKLCPKTFVTNTELERHTKSKHGKEKTLRCTLNGCRKTFAFKHHLVRHQNASHLNTRHICPICKEEMQSSLHLRNHMSVHKSSVTYKCPKCDRSYLRRGRLASHVLLIHKIRLTTEELAGISSQSEGLTNPHDLKEMTTGGQSPCCNKDVDGEKEIKDEPAVAADNSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605810;
90% Identity: iTF_00536998;
80% Identity: -