Dstu000288.1
Basic Information
- Insect
- Drosophila sturtevanti
- Gene Symbol
- nfxl1
- Assembly
- GCA_018150375.1
- Location
- JAECWJ010000686.1:2033664-2036783[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 1.7e+04 -5.2 2.6 15 19 147 151 147 151 0.87 2 20 0.066 5.6e+02 0.6 0.4 4 10 182 188 181 188 0.96 3 20 6.5e-08 0.00055 19.8 15.5 1 18 196 212 196 213 0.98 4 20 1.6 1.4e+04 -3.8 2.6 6 10 239 243 238 243 0.89 5 20 6.8e-07 0.0058 16.6 15.1 1 19 249 268 249 268 0.97 6 20 0.45 3.8e+03 -2.1 1.0 5 10 292 297 292 297 0.93 7 20 1.9e-07 0.0016 18.3 14.5 1 19 303 323 303 330 0.94 8 20 0.88 7.5e+03 -3.0 0.5 1 7 347 352 346 354 0.49 9 20 8.6e-08 0.00073 19.4 11.3 1 18 357 374 357 375 0.96 10 20 0.69 5.9e+03 -2.6 0.4 1 5 384 388 384 393 0.73 11 20 2 1.7e+04 -5.0 2.3 5 10 398 403 398 403 0.91 12 20 0.0016 14 5.8 16.0 1 18 409 426 409 427 0.97 13 20 2.4e-08 0.0002 21.2 14.8 1 19 436 454 430 454 0.90 14 20 4e-05 0.33 10.9 7.0 10 18 500 508 497 509 0.91 15 20 0.0016 13 5.8 5.8 1 12 521 531 521 531 0.96 16 20 2.6e-05 0.22 11.5 5.1 1 11 596 606 596 607 0.96 17 20 0.062 5.2e+02 0.7 18.0 3 18 636 651 635 652 0.91 18 20 0.55 4.6e+03 -2.3 0.7 8 13 657 662 656 663 0.78 19 20 0.11 8.9e+02 -0.0 0.3 1 8 661 672 661 673 0.75 20 20 2.3e-06 0.019 14.9 10.5 1 16 703 717 703 723 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTTAAAAAGGCCCAAGCAAAAAATAATTCGACTGCACAGGGACTGGTTGATACATACCCTTCTAGTTCAGAAGATGAAGAAGAATTGGACGAGAAGCACATATTGGAACTATTGTACAAGCACTACCAGCCAGCCGCGGATAAGAATAGGACCACTACCGAGCGCACATCCGCATTCCTCGAGAACGCGTTGCATTCGGGAGCTGCAACATGCCTAATTTGTATTGGTAGTATAAAACGCGTACAGTCAATATGGTCGTGTCGGAGCTGCTACTGTTTTTTTCACCTGAACTGTATCCAGCGCTGGGCTAATGACAGCCTTATGCAAATGAAGGTGAAAGCTGAGCAGCAGCAGAATGACAATCAGGGATACTATAATCATCTGGGAGAATTCGTTCCACCGAAGCGTGCCAAATCGCTTCACTGGTACTGCCCGCAATGCCGTTCAGAATATCGGCCAGATGAGCGGCCCACAACGTACAAATGCTTTTGTGGTAAGGAAGACAATCCCCCAACACAACCATTTCTAGTTCCACATTCATGTGGTGAGGTCTGTGAAAAGTTCTTGGAACCTAAGTGTGGCCACGATTGCAAACTTTTGTGTCATCCCGGGCCATGTCCACCATGTGCGCAGCAGTCCAAAAGCTCGTGTCGTTGCGGTAAGTCTGACCCACGACCTCTGCGCTGCATTGACAGGGATTGGCAGTGCCAGGAGAAATGCGATAAGCTTCTGTCGTGCGGTGAACACAAATGCAATCAGAGATGTCACCGTCCAGGGCAGTGCCCGGCCTGCAGCAGGCAAAGCAACCAGCCTTGTGAATGCGGTCGAGAGATGAAGATGGTCAGCTGTGCCAATCGTCGATGGAAGTGCCAGAATATTTGTGGTGCCAAATTTCTCTGTGGTCTGCATTCTTGTAATAAGACCTGTCATAAAGGACCCTGCGGAATGGGCGAGTGTCCCTTTGGCGTACGTTCCTGCCCCTGCGGTAAAAATATTCAATCCTTACCCTGCAGCGAGGTGGTAGAAACCTGTGGCGATACTTGCCAGAAACTTTTGTCTTGTGGCAAACACAAATGCACGCAGCGCTGTCATCGTGGCGCCTGCAATTTGTGTTTGGTTACGATAAGGAAAAAGTGTCGTTGCGGACTTCACGAAAAGGAGTTGCCATGTTCCAAAGAGTTTACATGTGAGACCAAGTGCAAGCAAGTTCGAGACTGTGGAAAACATGCATGTAACAGAAAGTGTTGTGGAGATCAATGTTCGCCATGCGAAAAGATTTGTGGCAAACCATTGAGCTGCAATAAACACAAATGCCAATCAGTTTGTCATCGTGGTCCTTGCTATCCATGCAGACTGGAATCGACAGTCAATTGCCGATGCGGCAAGACACGTCGGAACGTTCCATGCGGAAGAGAGAAAAATGCGCGAATCATCTGCATGGAGTTGTGCCGAGTTTCGGCCAAATGTCATCATGCCGTAAGACACCGCTGTCATAAGGGTGAATGTCCTCCGTGTAACCAGATATGTGGTCTTCCGAATGATACAAGCGGTTGTGGTCACATTTGCAAGGCTCTATGTCACAAGGCCGTCAAAGTCAAAAATCACAAAGATGTCAACCACCAAATGAAAAAATTGTACGACTATAAAACCTTACCGCATCCGCGTTGTGAGGATATCTTAATTGTGAATTGCATTGGTGGCCACGAGATGGTAAGCCTACCTTGCTGGAACTCCAAGCCCACATCTTGCTTTCGCAAATGTGGTAGGAAACTGAGATGTGGTAATCATCAATGTTCCCTTATATGCCATGCAGTCCCTAATTTGGAGGACATGCAACAGCAAATTGGATGTACCAGCTGTGAAGAAGGATGTGCTATACCTAGACATAATGGTTGTACTCATCCTTGCCCCAAAAGCTGTCATCCGCCGCCATGCGCTCCATGCAACGCTTTACTAAAAAAGAAGTGCCATTGTGGGCTCATACAGTTGATGCACAAGTGTAGCGAATTTTTTGCTGAAACGGGCTCAGTGCAGGAGCAACTCGAGCGAGATGAGAGATTGGGAAGCTGCGGAAATCGATGTATCAAAAATTTTCCTTGTGGTCATCGTTGCCTAACCGTTTGCCACTCGGGAAAATGTCCCAATCCCGACCTATGCCGTAAGAAGGTACGCATTCACTGCCCATGCAAGAGGATCAAGCAAGAAATTGGTTGCGATAAGCATCGTGGTGGACTTTTATTCCTACAGTGTGATTCCCACTGTGCAGCTGAGCGCTCTCGCGCTGTGGAGGACCAAGAACAAAAACAGCGTTTGGAAGAGGAAAAAAATCGACTGGAGCTAGAGAAGTTTCAACAAAAGTTTGGAAAGCGGAAATACAAGGAGCGCAAAGTCGCGGACATGGGACAAAGCAAAATGGAATTTAATTGGCAGCGTATTGCCATATATGGAGTATCTCTAATGGCAATTTTAGGAGCTGTAGCCGTAGCCTATTATGCGGATAAATAA
- Protein Sequence
- MEKFKKAQAKNNSTAQGLVDTYPSSSEDEEELDEKHILELLYKHYQPAADKNRTTTERTSAFLENALHSGAATCLICIGSIKRVQSIWSCRSCYCFFHLNCIQRWANDSLMQMKVKAEQQQNDNQGYYNHLGEFVPPKRAKSLHWYCPQCRSEYRPDERPTTYKCFCGKEDNPPTQPFLVPHSCGEVCEKFLEPKCGHDCKLLCHPGPCPPCAQQSKSSCRCGKSDPRPLRCIDRDWQCQEKCDKLLSCGEHKCNQRCHRPGQCPACSRQSNQPCECGREMKMVSCANRRWKCQNICGAKFLCGLHSCNKTCHKGPCGMGECPFGVRSCPCGKNIQSLPCSEVVETCGDTCQKLLSCGKHKCTQRCHRGACNLCLVTIRKKCRCGLHEKELPCSKEFTCETKCKQVRDCGKHACNRKCCGDQCSPCEKICGKPLSCNKHKCQSVCHRGPCYPCRLESTVNCRCGKTRRNVPCGREKNARIICMELCRVSAKCHHAVRHRCHKGECPPCNQICGLPNDTSGCGHICKALCHKAVKVKNHKDVNHQMKKLYDYKTLPHPRCEDILIVNCIGGHEMVSLPCWNSKPTSCFRKCGRKLRCGNHQCSLICHAVPNLEDMQQQIGCTSCEEGCAIPRHNGCTHPCPKSCHPPPCAPCNALLKKKCHCGLIQLMHKCSEFFAETGSVQEQLERDERLGSCGNRCIKNFPCGHRCLTVCHSGKCPNPDLCRKKVRIHCPCKRIKQEIGCDKHRGGLLFLQCDSHCAAERSRAVEDQEQKQRLEEEKNRLELEKFQQKFGKRKYKERKVADMGQSKMEFNWQRIAIYGVSLMAILGAVAVAYYADK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501486; iTF_00555519; iTF_00604520; iTF_00484128; iTF_00591387; iTF_00556253; iTF_00578206;
- 90% Identity
- -
- 80% Identity
- -