Dneo008207.1
Basic Information
- Insect
- Drosophila neocordata
- Gene Symbol
- nfxl1
- Assembly
- GCA_018903615.1
- Location
- JAEIGI010000003.1:7826983-7830150[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.54 5.1e+03 -2.3 0.6 15 18 93 96 92 97 0.81 2 21 2 1.9e+04 -5.2 2.6 15 19 150 154 150 154 0.87 3 21 0.066 6.3e+02 0.6 0.4 4 10 185 191 184 191 0.96 4 21 6.5e-08 0.00062 19.8 15.5 1 18 199 215 199 216 0.98 5 21 2 1.9e+04 -4.1 1.6 6 10 242 246 241 246 0.85 6 21 6.4e-07 0.0061 16.6 16.1 1 19 252 271 252 271 0.97 7 21 0.46 4.4e+03 -2.1 1.0 5 10 295 300 295 300 0.93 8 21 3.5e-07 0.0034 17.5 14.2 1 19 306 326 306 333 0.93 9 21 0.88 8.5e+03 -3.0 0.5 1 7 350 355 349 357 0.49 10 21 8.6e-08 0.00083 19.4 11.3 1 18 360 377 360 378 0.96 11 21 0.7 6.7e+03 -2.6 0.4 1 5 387 391 387 396 0.73 12 21 2 1.9e+04 -5.0 2.3 5 10 401 406 401 406 0.91 13 21 0.0011 11 6.3 14.9 1 18 412 429 412 430 0.97 14 21 1.7e-08 0.00017 21.6 14.4 1 19 439 457 433 457 0.90 15 21 3.7e-05 0.36 11.0 7.1 10 19 503 512 500 512 0.91 16 21 0.0022 21 5.3 6.3 1 12 524 534 524 534 0.96 17 21 1.2 1.1e+04 -3.4 0.3 6 10 589 593 588 594 0.85 18 21 4.7e-05 0.45 10.7 6.1 1 11 599 609 599 610 0.96 19 21 0.026 2.5e+02 1.9 17.8 1 18 638 654 638 655 0.93 20 21 0.49 4.7e+03 -2.2 0.1 3 7 670 674 670 675 0.80 21 21 5.8e-07 0.0056 16.8 10.0 1 16 706 720 706 726 0.92
Sequence Information
- Coding Sequence
- ATGGAAATGAAAAAGGAAAAATTTCTAAAGGCACAAGCGGAAAACTTGTCAAGTGCACAGAGACTTGCAATTGCATACCCTTCTAGTTCAGAAGATGAAGAAGAATTGGACGAAAAGCATATATTGGAACTATTGTACAAGCACTATCAGCCCTCGGATACATCTAGGACCACTTCCGAGCGCACATCCACATTCCTTGAGAACGCGCTGCATTCAGGAGCTGCAACTTGCCTAATTTGTATTGGTAGTATCAAGCGCGCACAATCAATATGGTCGTGTCAAAGCTGTTATTGCTATTTTCATTTGAACTGTATTCAACGGTGGGCTAATGACAGTCTTATGCAAATGAAGGTAAAGGCAGGAGAGCAGCAAAACGACAATCAGGGTTACTATAATCATCTAGGAGAATTTGTTCCACCGAAACCTGCTAAATCTCTACACTGGTATTGCCCCCAATGCCGGGCAGAATATCAGCCAGATGAGCGGCCCACAAAGTACAAATGCTTTTGTGGTAAGGAAGACAATCCCTCAGCACAACCCTTCCTAGTTCCACATTCATGTGGTGAGGTCTGTGGAAAATTTTTGGAACCAAAGTGTGGCCATGACTGCAAGCTTTTGTGCCATCCCGGGCCGTGTCCACCATGTGCGCAGCAGTGCAAAAGTTCGTGCCGTTGCGGTAAGTCTGCTCCAAGACCTTTACGCTGCATTGACAGAGATTGGCAGTGCCAGGATAAATGCGATATGGACTTGAAATGCGGTGAGCACAAATGCAATCAGAGATGTCACCGTCCAGGACAGTGTCCGACCTGCACAAAACAAAGCAACCAGCCTTGTGAGTGCGGACGAGCCGTAAAGATGGTCAACTGCGCCAACCGTCGTTGGAAGTGCCAAAATATTTGTGGTGCCCAGTTTCTCTGTGGTCTTCATTATTGTGATAAGCCCTGTCATAAAGGACCCTGTGGAATGGGCAAGTGCCCCTTTGGCGTACGTAGTTGTCCATGCGGTAAAAACACCCAATCTTTGCCTTGCACTGAGGTGGTGGAAACCTGTGGCGATACTTGCCAAAAACTTTTGTCCTGCGGCAAACACAAATGCACGCAACGCTGCCATCGAGGAGCCTGCAATTTGTGTTTAGTTACTATAAGAAAAAAATGCAGTTGTGGTCTCCACGAGAAAGAACTGCCATGCTCCAAAGAATTCACATGTGAGACCAAATGCAAGCAAGTACGAGACTGTGGAAAACATGCATGCAACAGAAAGTGTTGTGGAGATCAGTGTTTGCCCTGTGAAAAGATCTGTGGCAAGCAATTGAGTTGCAACAAACACAAATGTCAATCCGTTTGTCATCGTGGTCCTTGTTATCCATGCAGACTGGAATCGATAGTTAACTGCCGATGCGGCAAGACACGACGTAGCGTCCCATGTGGAAGAGAAAAAAATTCGCGAATCCTCTGTCTGGAATTGTGTAGAGTCTCATCCAAATGTCATCATTCCGTAAGACATCGGTGTCACAAGGGTGAGTGTCCTCCATGCACCCAGACATGTGGTCTCCCAAATGATGTGAGCGGATGTGGTCACATTTGCAAGGCTCCCTGCCACGAGGCCGTGAAAGTCAAACATAACAAAGAAGTTAAATCACAAATAAAAAAACCGTATGACTACAAAACCTTGCCGCATCCGCGTTGTGAAGAGAACGTAATTGTAAATTGCATCGGTGGTCACGAGATGATAAACACACCTTGCTGGAACTCCAAGCCCACATCATGCAATCGCAAATGTGGCAGAAAACTAAGATGCGGTAATCATCAATGCTCCCTTACATGCCACGCAGTCCCTATTGTCAAGGACATGCAACAACAGATTGGATGTGAAAGCTGTGAAGAAGGATGCGTTATACCCAGACTTAATGGTTGTAGTCATCCTTGTCCCAGAAGCTGTCATCCGCCGCCCTGCTCTCCATGCAACGTTCTGCTTAAGAACAAGTGCCATTGTAGGCTAATACAACTAATGCACAAGTGCAGCGACTTTTTTTCTAATACAGGCTCAATGGAGGAGCAAATAGAGCGTAAGGAGAGGTTGGGGAGCTGCGGAAATCGGTGTATAAAAAATTTTCCTTGTGGTCATCGATGTCTAGCCGTTTGTCATTCAGGAAAATGCCCCAATCCCGACTTATGTCGTAAGAAGGTTCGCATTTATTGTCCATGCAAGAGGATCAAACAAGAAATTGGTTGCGACAAGCATCGTAGCGGGCATGTGGCCTTACAATGCGATTCTCAATGTGCAGATGTTTGCTCACGCGCTTTAGAAGAACTTCAGCATAAGCATCGCTTGGAAGAAGAAAAAAATCAACTAGAGCTTGAGAAGTTTAATCAAAAATTCGGAAAGCGAAAGCACAAGGAACGCAAAGTCACTGACATGGGGCCAAGGAAAATAAAATTTAACTGGCAAGCCATTGCTGTATATGCAGTATCCCTAATGATAATATTGGGAGCTTTGGCCGTAGCCTATTATGCGGATAAATAA
- Protein Sequence
- MEMKKEKFLKAQAENLSSAQRLAIAYPSSSEDEEELDEKHILELLYKHYQPSDTSRTTSERTSTFLENALHSGAATCLICIGSIKRAQSIWSCQSCYCYFHLNCIQRWANDSLMQMKVKAGEQQNDNQGYYNHLGEFVPPKPAKSLHWYCPQCRAEYQPDERPTKYKCFCGKEDNPSAQPFLVPHSCGEVCGKFLEPKCGHDCKLLCHPGPCPPCAQQCKSSCRCGKSAPRPLRCIDRDWQCQDKCDMDLKCGEHKCNQRCHRPGQCPTCTKQSNQPCECGRAVKMVNCANRRWKCQNICGAQFLCGLHYCDKPCHKGPCGMGKCPFGVRSCPCGKNTQSLPCTEVVETCGDTCQKLLSCGKHKCTQRCHRGACNLCLVTIRKKCSCGLHEKELPCSKEFTCETKCKQVRDCGKHACNRKCCGDQCLPCEKICGKQLSCNKHKCQSVCHRGPCYPCRLESIVNCRCGKTRRSVPCGREKNSRILCLELCRVSSKCHHSVRHRCHKGECPPCTQTCGLPNDVSGCGHICKAPCHEAVKVKHNKEVKSQIKKPYDYKTLPHPRCEENVIVNCIGGHEMINTPCWNSKPTSCNRKCGRKLRCGNHQCSLTCHAVPIVKDMQQQIGCESCEEGCVIPRLNGCSHPCPRSCHPPPCSPCNVLLKNKCHCRLIQLMHKCSDFFSNTGSMEEQIERKERLGSCGNRCIKNFPCGHRCLAVCHSGKCPNPDLCRKKVRIYCPCKRIKQEIGCDKHRSGHVALQCDSQCADVCSRALEELQHKHRLEEEKNQLELEKFNQKFGKRKHKERKVTDMGPRKIKFNWQAIAVYAVSLMIILGALAVAYYADK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600738;
- 90% Identity
- -
- 80% Identity
- -