Dema009701.1
Basic Information
- Insect
- Drosophila emarginata
- Gene Symbol
- nfxl1
- Assembly
- GCA_037075365.1
- Location
- JBAMCD010000216.1:406194-410317[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 2.3e+04 -5.2 2.6 15 19 151 155 151 155 0.87 2 20 0.066 7.8e+02 0.6 0.4 4 10 186 192 185 192 0.96 3 20 6.5e-08 0.00076 19.8 15.5 1 18 200 216 200 217 0.98 4 20 2 2.3e+04 -4.1 1.6 6 10 243 247 242 247 0.85 5 20 3.5e-07 0.0042 17.5 16.4 1 19 253 272 253 272 0.97 6 20 0.46 5.3e+03 -2.1 1.0 5 10 296 301 296 301 0.93 7 20 2.8e-05 0.33 11.4 14.3 1 19 307 327 307 327 0.92 8 20 0.88 1e+04 -3.0 0.5 1 7 351 356 350 358 0.49 9 20 8.6e-08 0.001 19.4 11.3 1 18 361 378 361 379 0.96 10 20 1.1 1.3e+04 -3.3 2.9 1 11 388 398 388 399 0.83 11 20 2 2.3e+04 -5.0 2.3 5 10 402 407 402 407 0.91 12 20 0.0011 13 6.3 14.9 1 18 413 430 413 431 0.97 13 20 2.4e-08 0.00028 21.2 14.8 1 19 440 458 434 458 0.90 14 20 4.3e-05 0.5 10.8 7.8 9 19 503 513 501 513 0.89 15 20 0.0013 15 6.1 4.2 1 11 525 534 525 535 0.97 16 20 4.7e-05 0.55 10.7 6.1 1 11 599 609 599 610 0.96 17 20 1.3 1.6e+04 -3.6 1.0 6 10 626 630 625 630 0.87 18 20 0.013 1.5e+02 2.9 14.4 1 19 638 655 638 655 0.94 19 20 0.21 2.4e+03 -1.0 0.3 1 7 664 674 664 675 0.72 20 20 3.4e-07 0.004 17.5 10.5 1 16 706 720 706 726 0.92
Sequence Information
- Coding Sequence
- atggaaatgaaaaaagaaaagtttctaACGGCACAAGCAATAAACTTGTCCAGTGCACAGAGACTTGCAAATGCATACTCTTCTAGTTCAGAAGATGAGGAAGAATTGGACGAAAAACACATATTGGAACTATTGTACAAGCACTACGAGCCCGCCTCAGATACGTCTAGGACCACTTCCGAGCGCACATCCACGTTCCTCGAGAATACGCTGCATTCTGGAGCTGCAACTTGTCTAATTTGTATTGGCAGTATTAAACGCTTACAGTCAATATGGTCTTGTCGAAGCTGCTATTGCTGTTTTCACTTGAACTGCATTCAACGATGGGCTAATGACAGTCTAATGCAAATGAAGGTGAAAGCAGGACAGCAGCAAAACGACAATCAGGGATATTATAATCATCTGGGAGAATTCGTTCCACCGAAGCCTGCCAAATCGATACACTGGTATTGCCCGCAATGCCGTGCTGAATATCAGCTCGATGAGCGGCCCACAACATACAAATGTTTTTGTGGTAAGGAAGACAATCCCCAATCACAACCTTTTCTAGTTCCACATTCGTGTGGTGAGGTCTGTAAAAAGTCTTTGGAACCAAAGTGTGGCCATGACTGCAAGCTTTTATGCCATCCCGGGCCGTGTCCACCATGTGCGCAGCAGTCAACAAGTTTTTGCCGCTGCGGTAAGTCTGGCCCACGACCTTTACGCTGCATTGACAGAGATTGGCAGTGCCAGGATAAGTGCGATATGCTCCTGTCATGTGGTAAGCACAAATGCAAACAGAGATGTCACCGTCCAGGGCAGTGTCCGACCTGCACCAGTCAAAGTAACCAGCCTTGTGAGTGCGGACGAGACATAAAGATTGTCAACTGCGCCAACCGTAAGTGGAAGTGCCAAAATATTTGCCGAACGCAGTTTCTCTGTGGGCTGCATTTTTGTGATAAACCATGTCACAAAGGACACTGCGGCATCGAAAAGTGCCCCTTTGGCATACGTAGTTGTCCCTGCGGTAAAAGTaGCCAATCCTTGCCCTGCAGCGAGAGCGTGGAAACCTGTGGCGATACTTGCCAGAAACTTTTGTCCTGTGGCAAACACAAATGCACGCAACGCTGCCATCGAGGAGCCTGCAATTTGTGTTTGGTTACTACAAGGAAAAAATGCCGCTGCGGTCTCCATGAGAAAGAACTGCCATGCTGCAAAGAGTTTACATGTGAGACAAAGTGCAAGCAACTACGAGACTGTGGAAAACATGCATGCAACAGAAAGTGTTGTGGAGATCAGTGTTTGCCGTGTGAAAAGATCTGTGGCAAGCCATTGAGTTGCAACAAACACAAATGTCAATCCGTTTGTCATCGTGGTCCTTGCTATCCATGCAGATTGATATCCATAGTCAATTGCCGATGCGGTAAGACACGACGTAGCGTTCCATgtggaagagaaaaaaactcGCGAATCCTCTGCTTGGAACTGTGTAGagtTTCAGCCAAATGTCATCATGCCGTAAAACATCGCTGTCATAAGGGTGAGTGTCCTCCGTGTAGTCAGATATGCGGTCTCCCAAATGATGTAAGCGCTTGTGGTCACATTTGCAAGGCTCTATGCCACATGGCCgtaaaagtcaaaaataacaaacttgCCAAATCAGAGATGAAAAAAACAGACTATAAAGCATTACCTCATCCGCGCTGTGAGAAGAGCGTAACTGTGAATTGCATTGGTGGTCACGAGGTGATAAGCATACCTTGCTGGAACTCCAAGCCCACATCATGCTATCGCAAATGTGGTAGACAACTAAATTGTGGAAATCATCAATGTTCTCTTACTTGCCACGCAGTCCCTAATTTGAAGGACATGCAACAACAGATTGGATGTACTAGCTGTGAAGAAGCCTGCGTTGTACCAAGACTTAATGGTTGTAGTCATCCTTGCGCCAAAAGCTGTCATCTGCCGCCCTGCTCTCCATGCAGCGCTCTGTTTAAGAACAAGTGCCACTGTGGTCTTATACAACTGATGCACAAGTGCAGCGACTATTTTTCTGATACAGGGTCCATGCAGGAGCAAATAGAGCGAAAAGAGAGGTTGGGCAGCTGCGGAAATCggtgtataaaaaatTTTCCTTGTGGTCATCGATGTCTGGAAGTTTGTCACTCGGGAAAATGTCCCAATCCCGACTTATGTCGTAAGAAGGTACGCATTTACTGTCCATGCAAGAGGATCAGGCAGGAAATTGGTTGCGACAAGCATCGCAGTGGGTATTTGGCCTTGCAGTGCGACTCCCATTGTGCAGTTGCTCGTTCACGAGATCTGAAAGAACTCGAGCATAAACATCGcttagaagaagaaaaaaatcgattggagttggaaaagtttaaacaaaaatttggaaaGCGGAAGCATAAGGAGCACAAAGTCACAGAAATGCAGCGAAGTAAAACGGAATTTAATTGGCAGGCCATTGCTGTATATACAGTATCCCTAATGGTAATACTGGGAGCTCTGGCCGTAGCCTATTATCCGGATAAGTAa
- Protein Sequence
- MEMKKEKFLTAQAINLSSAQRLANAYSSSSEDEEELDEKHILELLYKHYEPASDTSRTTSERTSTFLENTLHSGAATCLICIGSIKRLQSIWSCRSCYCCFHLNCIQRWANDSLMQMKVKAGQQQNDNQGYYNHLGEFVPPKPAKSIHWYCPQCRAEYQLDERPTTYKCFCGKEDNPQSQPFLVPHSCGEVCKKSLEPKCGHDCKLLCHPGPCPPCAQQSTSFCRCGKSGPRPLRCIDRDWQCQDKCDMLLSCGKHKCKQRCHRPGQCPTCTSQSNQPCECGRDIKIVNCANRKWKCQNICRTQFLCGLHFCDKPCHKGHCGIEKCPFGIRSCPCGKSSQSLPCSESVETCGDTCQKLLSCGKHKCTQRCHRGACNLCLVTTRKKCRCGLHEKELPCCKEFTCETKCKQLRDCGKHACNRKCCGDQCLPCEKICGKPLSCNKHKCQSVCHRGPCYPCRLISIVNCRCGKTRRSVPCGREKNSRILCLELCRVSAKCHHAVKHRCHKGECPPCSQICGLPNDVSACGHICKALCHMAVKVKNNKLAKSEMKKTDYKALPHPRCEKSVTVNCIGGHEVISIPCWNSKPTSCYRKCGRQLNCGNHQCSLTCHAVPNLKDMQQQIGCTSCEEACVVPRLNGCSHPCAKSCHLPPCSPCSALFKNKCHCGLIQLMHKCSDYFSDTGSMQEQIERKERLGSCGNRCIKNFPCGHRCLEVCHSGKCPNPDLCRKKVRIYCPCKRIRQEIGCDKHRSGYLALQCDSHCAVARSRDLKELEHKHRLEEEKNRLELEKFKQKFGKRKHKEHKVTEMQRSKTEFNWQAIAVYTVSLMVILGALAVAYYPDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600738;
- 90% Identity
- -
- 80% Identity
- -