Dsuc002897.1
Basic Information
- Insect
- Drosophila sucinea
- Gene Symbol
- nfxl1
- Assembly
- GCA_018150745.1
- Location
- JAECWP010000004.1:1995593-1999120[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.53 4.8e+03 -2.3 0.6 15 18 90 93 89 94 0.81 2 19 2 1.8e+04 -8.1 6.4 15 19 147 151 146 151 0.82 3 19 0.066 5.9e+02 0.6 0.4 4 10 182 188 181 188 0.96 4 19 6.4e-08 0.00058 19.8 15.5 1 18 196 212 196 213 0.98 5 19 1.6 1.4e+04 -3.8 2.6 6 10 239 243 238 243 0.89 6 19 0.00043 3.8 7.6 16.1 1 19 249 268 249 268 0.96 7 19 0.45 4.1e+03 -2.1 1.0 5 10 292 297 292 297 0.93 8 19 6.5e-07 0.0059 16.6 14.2 1 19 303 323 303 330 0.94 9 19 6.5e-08 0.00059 19.8 12.0 1 18 357 374 357 375 0.96 10 19 0.69 6.3e+03 -2.6 0.4 1 5 384 388 384 393 0.73 11 19 2 1.8e+04 -5.0 2.3 5 10 398 403 398 403 0.91 12 19 0.0011 10 6.3 14.9 1 18 409 426 409 427 0.97 13 19 2.4e-08 0.00021 21.2 14.8 1 19 436 454 430 454 0.90 14 19 4.3e-05 0.39 10.8 7.5 9 19 499 509 497 509 0.89 15 19 0.0013 12 6.0 5.4 1 12 521 531 521 531 0.96 16 19 5.1e-05 0.46 10.6 4.7 1 11 595 605 595 606 0.96 17 19 0.034 3e+02 1.6 15.6 1 18 634 650 634 651 0.93 18 19 2 1.8e+04 -5.5 2.1 9 13 657 661 656 661 0.72 19 19 1.1e-06 0.0096 15.9 9.6 1 16 702 716 702 722 0.92
Sequence Information
- Coding Sequence
- ATGGAGAAGTTTAAAATTGAACAATCAAAGAACTTGTCATCTGCAAAGAAACTTGTAGAAAACTACACATCCAGCTCAGAAGATGAAGAAGAATTGGATGAAACACATATTCTGGAACTCTTGTACAAGCATTACCAACCCGTCTCGGATTCGTCTTGGACCCCCACAGGTCGCACATCTGCGTTCCTTGAAAACACTCTGCATTCGGGTGCTGCAACGTGCCTAATATGCATTGGTAGCATTAAACGCATGGAGTCAATATGGTCGTGTCAAAGTTGCTATTGTTTTTTTCACCTAAATTGCATTCAACGCTGGGCTAATGACAGTCTTATGCAAATGAAGGTAAAAGCAGAGCAGGAACGAAATGAACATGAGGGATACTATAACCATCTGGGGGAATTCGTTTCACCGAAGCGCGTTAAGTCGCTTCACTGGTGCTGTCCGCAGTGTCGTATGGAATATCAGCCTGCGGAGCGGCCGACGACCTATAAATGCTTTTGTAATAAGCAAGTCAATCCTTCTGCACAACCCTTCCTTGTTCCACATTCATGTGGCGAAGTTTGTGGAAAGTTTTTAGAACCAAAGTGTGGTCATGACTGCAAACTTCTGTGTCATCCGGGGCCTTGTCCACCATGTGCGCAACAGTCCAAAAGCACATGCCGTTGCGGCAAGTCTGCCCCTCGATCTCTGCGCTGCCTTGACCGAGATTGGCAATGCCAAGAGAAATGCGACAAGCTCCTATCATGTGGTAAGCACAAATGCAATCAGAGATGCCACATTCCAGAACATTGCCCAAGTTGCACCAGCCAAAGTAACCAGCCATGTGAGTGCGGGCGAGACGTGAAGAAGGTCAGCTGCGCCAACCGTAAGTGGAAATGTCAGAATATATGTGGTGCACGTTTTGTCTGTGGTCTGCATTCCTGCGATAAAGCGTGTCATAAAGGACCATGTGGAATGGGCGAGTGCCCCTTAGGCGTACGTAGCTGTCCCTGCGGTAAAAATAGTCAATCCTCACTCTGCAGTGAGGTGGTAGAAACTTGTGGCGACTCTTGCCAGAAGCTTTTGTCCTGTGGCCAACACACATGCACGCAACGTTGCCATCGAGGATCCTGCAATTTGTGTCTGGTTACAACAAAGAAAAGGTGCCGCTGTGGCCTGCACGAAAAGGAGCTGCCATGCTCTAAAGAGTTCACATGTGAGACCAAATGCAAGCAAGTACGAGACTGCGGAAAACATGCCTGCAACAGGAAATGCTGTGGAGATCAGTGTTTGCCCTGTGAGAAGATTTGTGGCAAGCCATTGAGTTGCAACAAACACAAATGCCAATCCGTCTGTCACCGTGGACCCTGCTATCCATGCAGACTGGAATCAACAGTTATATGCCGATGCGGCAAGACACGACGAAAAGTTCCATGTGGCAGGGAGAGGAATTCGCGGATCCTGTGCCTAGAGCTGTGTCGAATTTCAGCCAAATGTCATCATGCCGTAAAACATCGATGCCATAAGGGCGAGTGTCCTCCATGCACCCAGAAATGTGGCCTTCTAAATGATATCGACAATTGTGGTCACATTTGCAATGCTCCATGCCACGAAGCAGTAAAAGTCAAGAATCATAAAGACATCAAACCGCAGATGAAAAAATATGAATATAAATCCTTACCACATCCGCGTTGTGACGAGGGCGTAATTGTCAATTGCGTTGGTGGTCACGAGGTCGTAATCACGCCTTGCTGGAACTCTAAGCCCACTTCATGCTATCGCAAATGTGGTAGAAGACTGACCTGCGGTAATCATCAATGTTCTCTTATGTGCCACGCGGTGCTTAATTCGGAGGACATGCAGCAACAGCTAGGCTGCAAAAGCTGTGAAGAGGGATGCGTTATACCAAGGCCCAATGGTTGTAGCCATCCGTGTCCCAGAAGTTGTCATTTGCCTCCCTGCTCTCCATGCAACGTTCTGCTTAAAACTAAATGTCACTGCGGATTAATGCAGATGATGTACACTTGTAGCGAGTTTTTCGACGAGACGGGATTAATGCAAAAGCAACTCGAGCGAAAAGAGAGATTGTTAAACTGCGGAAATCGTTGTATGAAAAATTTTCCATGTGGTCATCGATGTCTGGCCATTTGTCACTCTGGCAGATGCCCTAATCCCGAGCTGTGTCGTAAGAAGGTGCGCGTTTACTGCTTATGCAAGAGAATCAAACAGGAAATTGCCTGCGACAAGCATCGAAGTGGTCAATTGTTACTAAATTGCGATTCCCATTGTGCAGCTGAGCGCTCACGCGCGTCAAAAGAACTTGAGCAAAAGAACCGCTTGGAGGAAGAAAAAAATCGTCTTGAGCTGGAAAAATTTCAACAAAAGTTTGGAAAGCGCAAGCACAAAGAGCGCAAAGTCATAGGCATTGGGCCAAGACAAATGGATTTTGACTGGCATCGAGGAGCCATCTATGCAGTTTTCTTAATGGCCATACTGTCAGCTCTTGCAGTAGCCTATTATGCGGATAGCTAA
- Protein Sequence
- MEKFKIEQSKNLSSAKKLVENYTSSSEDEEELDETHILELLYKHYQPVSDSSWTPTGRTSAFLENTLHSGAATCLICIGSIKRMESIWSCQSCYCFFHLNCIQRWANDSLMQMKVKAEQERNEHEGYYNHLGEFVSPKRVKSLHWCCPQCRMEYQPAERPTTYKCFCNKQVNPSAQPFLVPHSCGEVCGKFLEPKCGHDCKLLCHPGPCPPCAQQSKSTCRCGKSAPRSLRCLDRDWQCQEKCDKLLSCGKHKCNQRCHIPEHCPSCTSQSNQPCECGRDVKKVSCANRKWKCQNICGARFVCGLHSCDKACHKGPCGMGECPLGVRSCPCGKNSQSSLCSEVVETCGDSCQKLLSCGQHTCTQRCHRGSCNLCLVTTKKRCRCGLHEKELPCSKEFTCETKCKQVRDCGKHACNRKCCGDQCLPCEKICGKPLSCNKHKCQSVCHRGPCYPCRLESTVICRCGKTRRKVPCGRERNSRILCLELCRISAKCHHAVKHRCHKGECPPCTQKCGLLNDIDNCGHICNAPCHEAVKVKNHKDIKPQMKKYEYKSLPHPRCDEGVIVNCVGGHEVVITPCWNSKPTSCYRKCGRRLTCGNHQCSLMCHAVLNSEDMQQQLGCKSCEEGCVIPRPNGCSHPCPRSCHLPPCSPCNVLLKTKCHCGLMQMMYTCSEFFDETGLMQKQLERKERLLNCGNRCMKNFPCGHRCLAICHSGRCPNPELCRKKVRVYCLCKRIKQEIACDKHRSGQLLLNCDSHCAAERSRASKELEQKNRLEEEKNRLELEKFQQKFGKRKHKERKVIGIGPRQMDFDWHRGAIYAVFLMAILSALAVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00600738;
- 90% Identity
- iTF_00555519;
- 80% Identity
- -