Basic Information

Insect: Drosophila sturtevanti
Gene Symbol: -
Assembly: GCA_018150375.1
Location: JAECWJ010000543.1:317566-320764[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.5e-05 0.0025 18.1 1.0 1 23 240 263 240 263 0.96

2 17 0.0038 0.27 11.7 1.5 1 23 269 291 269 291 0.98

3 17 0.047 3.3 8.3 0.3 2 23 323 344 322 344 0.95

4 17 0.00013 0.0091 16.3 1.0 1 23 425 448 425 448 0.97

5 17 0.39 28 5.4 0.5 1 19 455 473 455 476 0.86

6 17 0.035 2.4 8.7 3.8 1 23 485 507 485 507 0.95

7 17 1.7e-06 0.00012 22.3 0.3 1 23 514 537 514 537 0.97

8 17 9.4e-05 0.0066 16.8 1.4 2 23 545 566 544 566 0.96

9 17 0.03 2.1 8.9 0.4 3 21 594 612 592 613 0.93

10 17 0.0057 0.4 11.2 2.0 1 23 671 694 671 694 0.96

11 17 0.058 4.1 8.0 2.4 1 23 731 754 731 754 0.95

12 17 0.00013 0.0091 16.3 1.6 2 23 793 815 792 815 0.95

13 17 0.0003 0.021 15.2 1.0 1 23 829 851 829 851 0.95

14 17 4.3e-05 0.0031 17.8 2.1 1 23 857 879 857 879 0.99

15 17 3.7e-06 0.00026 21.2 0.7 1 23 885 907 885 907 0.98

16 17 7.8e-05 0.0055 17.0 2.3 1 23 913 935 913 935 0.97

17 17 3.2e-05 0.0022 18.2 0.6 1 23 941 965 941 965 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.5e-05	0.0025	18.1	1.0	1	23	240	263	240	263	0.96
2	17	0.0038	0.27	11.7	1.5	1	23	269	291	269	291	0.98
3	17	0.047	3.3	8.3	0.3	2	23	323	344	322	344	0.95
4	17	0.00013	0.0091	16.3	1.0	1	23	425	448	425	448	0.97
5	17	0.39	28	5.4	0.5	1	19	455	473	455	476	0.86
6	17	0.035	2.4	8.7	3.8	1	23	485	507	485	507	0.95
7	17	1.7e-06	0.00012	22.3	0.3	1	23	514	537	514	537	0.97
8	17	9.4e-05	0.0066	16.8	1.4	2	23	545	566	544	566	0.96
9	17	0.03	2.1	8.9	0.4	3	21	594	612	592	613	0.93
10	17	0.0057	0.4	11.2	2.0	1	23	671	694	671	694	0.96
11	17	0.058	4.1	8.0	2.4	1	23	731	754	731	754	0.95
12	17	0.00013	0.0091	16.3	1.6	2	23	793	815	792	815	0.95
13	17	0.0003	0.021	15.2	1.0	1	23	829	851	829	851	0.95
14	17	4.3e-05	0.0031	17.8	2.1	1	23	857	879	857	879	0.99
15	17	3.7e-06	0.00026	21.2	0.7	1	23	885	907	885	907	0.98
16	17	7.8e-05	0.0055	17.0	2.3	1	23	913	935	913	935	0.97
17	17	3.2e-05	0.0022	18.2	0.6	1	23	941	965	941	965	0.90

Sequence Information

Coding Sequence: ATGAAGCTGCCGACTGCCTGTCGCACTTGCGATGCTAGTGCTAAGGACACGGACAAGCTGTATAATCTAGACACGCCCTGCAGGGAATATCCGGAAAAATTGCTGTCCGATATTCTCGTTGAATTAACGAATATTGATCTGAAGATGCACTTACCCAGGGACCAGAAGTTGCCGCAATGTTTGTGCAGTTGTTGCTTGAGGAGATTGATGGCTTCCTACGACTATGTGAAACAAGCCTTGTCCGCCAACAATTTACTGATCCGGCAGATAAAGCACATTACGGAACAGGCATCCGTTAACGCTAACGATTGCCTACAAGAGGCACCAATGGAGCTATGTGCAGAGCAACATGTGGAAGTTAAGATGGAAACAGAAGGAGAAGACAGCGACAGGGAAAATGGAGAGAACGGCGACACGAGAAAAATAACCTGCACTGAGTTGCCCAATCTAGAAGAAGCTGAAACTGTTGGCGGTGATGATGCGGAGATCAAGAGACCAATAGATCCATTAATAATGCTCGACCCGATGACACTTAAAAAAGAAAGCGACACTCAGGGAAATTTGGAAGAGCTGGATGAAGTGGGTAATGCTGATTGTGAAGATGACGAACTCGAGCCCAATGAAGATGAGGATTCTCTTGATAATATTCCGCTGCAACAACGCGTTTTAAAGTGGAAGAAAAAACGGGGTACCCATAAATTGACCAGACAACGCCCCTTTCAATGCAGTTTATGTCCCAAGAGTTTCATACGTGGGGAATCTTTAAAGAAGCACAAGTCAAGGGTACATCAAGCTTCTGGCCTATTTTCTTGCTCGCTTTGCATAAGAAAATTTAAAAGACAAGAAACTCTGGATTCTCATCTTAAGATCCATAGTGAATCCAAACGCTCATCGCATATCAGCGAGCATAAGAAGGCCAAATCAATTGATGTTAATCTTTGCAAGCCCCATGGCTACAAGCTTATCGAATGTATGATATGTCAAAGTCAATATAACAAAATATCAGACTTGCGCCGCCATTTGGAGAACCATCCGGCAATTACCACCCTCGTCAAACGCCCTAACGTGGAATCTTTAGCCGATTTCTTTTACCCGGACTCGAAAAATATAAGCGATGGGCAACTGAAGCAACTTATTCACCAGGATTTAATGGCTGGCCATTTTCAACGCTTTTACTCAATAACTAATCAATCCGGTTATGAGATTGATCTGGATAGTTCGGAAACCGACAGCGAAGAGGAGAAGGAGCCGGCATCTCAGCATGATCTAGAATACAACTGTGAGCTGTGCCCGCAGAGATATGCGCGAAAATATCAACTTTACGATCACCAACGTCAAGACCATCCCTGGTTGGATGCTCCTCATGTCTGTGGTCGGTGTCAGGCAAGATTTGTTAGTGTGCAACTATTGCGACACCACAATGAATCGCAGTGCCGTAATGCCCAGAAGAGGTTCCTTTGCTATAAATGTCCGTTACGGTTTCGGTGGAAGCATAATTTCAGGAGTCATATTCGGGAGCATCGCATTACTAATCAAACTTTTGAGTGTCCTGACTGCAAGCGCGTATTTGACAATAAGAAATCTCTCACAGTACATTTGCTCAGCGTCCATGCCGACGAATCAAAGCTGCTCCCCTGCCAGTGGTGCAGCCGCAAATTCTACCGACGCGACTATCTGGTAAAGCATTTAAAGCGTCATGGATTCAAAGAGCAAGACATACCGCTAGCAGAGACTTTAATAGCTGCCACTTCGAAACCTAATGGTGTCAAACGGATCTGTTGTAAGATTTGTAATTCTCAATTCGAGCGTATACGGGAGCTTCGTGCCCACATCCAATTGGAGCTGGGTCTGAAGCTATCAATGTCGTCACCTGCTTCAGCGCAGACAAATATCGACTCACCCCATAACTATTCCATTACTAACGAATCCGGATTTGAGCTGCAGATGGACGATTCGGAAACGGAAGATGAAATGCTAATGCCGGGAGTAACTAGCGGTCACCGTGTTGGCTATATGTGTGAGCTGTGTAGCATACAGTGTCGACGCAAATATGAAATGATCCAGCATCAGCGGGCAATGCATCGCTTCGATAAGATGCCTTATGAGTGCGAAACGTGCATATTTAAATGTGTGTCCAAGAACATTATGGAACATCATCGGTTGGGCCAATGCGGTAGCTTGGAGAAGAAACATGCATGCACCCAATGCAGCTACAAATTTATGTGGCCAGAGAATCTAGAGCACCATCTTCGCCTTCAGCATGGCCAGAGTTCATCCACAACTAAGGAGCAGCTCAGAACTACCAATGACCTCCTGCAGGCAAAGTCTACTACCAAAGAAGAACAATCTCAATCACAAATCGATGTCCAGCTGCTTCAGTGTCCACATTGTGATCGAACCTATCAAATGAAATCCCGTTTAAACAATCACATCCGCGATGTTCATGTGAATGGCGATCGTAAGCGGAAGGAGGCCGAAAAAAAATTCCTTTGTTCGCTATGCGGTCGTGCAACAAAGACTGCTGCTTGTCTGGTTACACATATTCGTCGTCATACTGGTGAGAAACCATTTAAATGTGATTTTTGCGAAATGGCCTTTCCCAGGCATTCTGAAATGACTGCACACCGACGCACCCACACAGGAGAGAAACCATATAACTGCACAGTTTGTGCAAAAAACTTCGCTCGATCCGACAAGTTAAAGCGGCATATGCTTATCCATAGTGGTTTAAAACCGCATTCCTGCGGGTATTGCGAGAAGAGCTATCGCCAAGCTAAAGACTTGAAATTGCATTTGCAACAGCATACCGGAGAGTCTCCATTTATCTGTGGCACGTGTGGGGAGAGGTTCATACAGAGTAGCACACTGGAAAAACACCGAATGATGCGGCGCCACTTCGATGAAGTCGAAGGGGCATCGATGGCTTCAACACGAAATTAG
Protein Sequence: MKLPTACRTCDASAKDTDKLYNLDTPCREYPEKLLSDILVELTNIDLKMHLPRDQKLPQCLCSCCLRRLMASYDYVKQALSANNLLIRQIKHITEQASVNANDCLQEAPMELCAEQHVEVKMETEGEDSDRENGENGDTRKITCTELPNLEEAETVGGDDAEIKRPIDPLIMLDPMTLKKESDTQGNLEELDEVGNADCEDDELEPNEDEDSLDNIPLQQRVLKWKKKRGTHKLTRQRPFQCSLCPKSFIRGESLKKHKSRVHQASGLFSCSLCIRKFKRQETLDSHLKIHSESKRSSHISEHKKAKSIDVNLCKPHGYKLIECMICQSQYNKISDLRRHLENHPAITTLVKRPNVESLADFFYPDSKNISDGQLKQLIHQDLMAGHFQRFYSITNQSGYEIDLDSSETDSEEEKEPASQHDLEYNCELCPQRYARKYQLYDHQRQDHPWLDAPHVCGRCQARFVSVQLLRHHNESQCRNAQKRFLCYKCPLRFRWKHNFRSHIREHRITNQTFECPDCKRVFDNKKSLTVHLLSVHADESKLLPCQWCSRKFYRRDYLVKHLKRHGFKEQDIPLAETLIAATSKPNGVKRICCKICNSQFERIRELRAHIQLELGLKLSMSSPASAQTNIDSPHNYSITNESGFELQMDDSETEDEMLMPGVTSGHRVGYMCELCSIQCRRKYEMIQHQRAMHRFDKMPYECETCIFKCVSKNIMEHHRLGQCGSLEKKHACTQCSYKFMWPENLEHHLRLQHGQSSSTTKEQLRTTNDLLQAKSTTKEEQSQSQIDVQLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAEKKFLCSLCGRATKTAACLVTHIRRHTGEKPFKCDFCEMAFPRHSEMTAHRRTHTGEKPYNCTVCAKNFARSDKLKRHMLIHSGLKPHSCGYCEKSYRQAKDLKLHLQQHTGESPFICGTCGERFIQSSTLEKHRMMRRHFDEVEGASMASTRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00555987; iTF_00523845; iTF_00591116; iTF_00577934; iTF_00483861; iTF_00604249; iTF_00555245; iTF_00501214;
90% Identity: iTF_00501214;
80% Identity: -