Basic Information

Insect: Drosophila sucinea
Gene Symbol: -
Assembly: GCA_018150745.1
Location: JAECWP010000114.1:10255795-10258940[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00036 0.027 14.9 2.0 1 23 229 252 229 252 0.95

2 17 0.00096 0.071 13.6 1.2 1 23 258 280 258 280 0.98

3 17 0.023 1.7 9.3 0.3 2 23 312 333 311 333 0.94

4 17 0.00012 0.0089 16.5 0.8 1 23 415 438 415 438 0.97

5 17 0.18 13 6.5 0.7 1 19 445 463 445 466 0.93

6 17 0.035 2.6 8.7 3.8 1 23 475 497 475 497 0.95

7 17 4.8e-06 0.00036 20.8 0.4 1 23 504 527 504 527 0.97

8 17 9.4e-05 0.007 16.8 1.4 2 23 535 556 534 556 0.96

9 17 0.0039 0.29 11.7 0.3 2 21 583 602 582 603 0.94

10 17 0.0057 0.43 11.2 2.0 1 23 661 684 661 684 0.96

11 17 0.052 3.8 8.2 1.8 1 23 721 744 721 744 0.94

12 17 0.00013 0.0096 16.4 1.6 2 23 783 805 782 805 0.95

13 17 0.00031 0.023 15.2 1.5 1 23 819 841 819 841 0.95

14 17 6.9e-05 0.0051 17.2 1.8 1 23 847 869 847 869 0.99

15 17 2.3e-07 1.7e-05 25.0 2.4 1 23 875 897 875 897 0.98

16 17 6.2e-05 0.0046 17.4 2.3 1 23 903 925 903 925 0.96

17 17 3.2e-05 0.0024 18.3 0.6 1 23 931 955 931 955 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00036	0.027	14.9	2.0	1	23	229	252	229	252	0.95
2	17	0.00096	0.071	13.6	1.2	1	23	258	280	258	280	0.98
3	17	0.023	1.7	9.3	0.3	2	23	312	333	311	333	0.94
4	17	0.00012	0.0089	16.5	0.8	1	23	415	438	415	438	0.97
5	17	0.18	13	6.5	0.7	1	19	445	463	445	466	0.93
6	17	0.035	2.6	8.7	3.8	1	23	475	497	475	497	0.95
7	17	4.8e-06	0.00036	20.8	0.4	1	23	504	527	504	527	0.97
8	17	9.4e-05	0.007	16.8	1.4	2	23	535	556	534	556	0.96
9	17	0.0039	0.29	11.7	0.3	2	21	583	602	582	603	0.94
10	17	0.0057	0.43	11.2	2.0	1	23	661	684	661	684	0.96
11	17	0.052	3.8	8.2	1.8	1	23	721	744	721	744	0.94
12	17	0.00013	0.0096	16.4	1.6	2	23	783	805	782	805	0.95
13	17	0.00031	0.023	15.2	1.5	1	23	819	841	819	841	0.95
14	17	6.9e-05	0.0051	17.2	1.8	1	23	847	869	847	869	0.99
15	17	2.3e-07	1.7e-05	25.0	2.4	1	23	875	897	875	897	0.98
16	17	6.2e-05	0.0046	17.4	2.3	1	23	903	925	903	925	0.96
17	17	3.2e-05	0.0024	18.3	0.6	1	23	931	955	931	955	0.90

Sequence Information

Coding Sequence: ATGAAGATGCCGGTTGTCTGTCGCACTTGCGATGCTAGTGCTAAAGACACGGATAAGCTGTACAATCTAAACACGCCCAGCAAAGAATATCCGGACAAGTTGCTTTCTGAGATTCTCGGTGAATTAATAAATATTGATCTAAAGATGCATCTACCCAGTGATCAGAAGTTGCCGCAATCGTTGTGCAGTTGCTGCTTAAAGAGATTGACGGCTTCCTATGACTATGTGAAACAAGCTTTGTCCGCTAACACTTTGCTGATGCGGCAACTACAAGATTGCTTACAAGAGTCGCCAATGGAACTGTGTGCCGAGCAACATGTGGAGGTTAAAATGGAAACTGAAGGGGATGACAGTAACGATGAAAATACAGAAAGTGGGAAGATAACCTGCACAGAGTTGCCCAATCTAGAAGAGGCTGCTGCTGTTGGGGGCAATGATGATGATACTAAGAGACAAATAGATCCGTTAATAATGCTCGATCCGACAGCAGTCAAAAAAGAAAATGAAACACATCAACCCAACATAGAAGAGGAGGATGAAATGGGTAATGCTGATTGTGACGATGATGATTTCGATCCCGACGACGATGAGGATGAAGACTCCCTTGATAATATACCGCTGCAACAACGAGCTTTAAAGTGGAAAAAAAAGCGGGGTACACTTAAATTGACTAGACGGCGACCATTTCAATGCAGTCAATGCTCCAAAAGTTTCATAAGCGGCGAATCTTTAAAAAAGCACAAGTTCAGAATACATCAGGCTTCTGGCCTCTTTTCTTGTTCGCTTTGCATACGGAAATTTAACCGGCAGGAAACTTTGGAGACACATCTCAAGGTTCATAGTGAATCCAAACGGTCATCCCATCTCAGCGAGCATAAAAAAGCCAAATCGATTGATGTTAATCTTTGCAAACCCCATGGTTACAAACTAATTGAGTGCATGCTATGTCAAACTCAATATAACAAAATATCAGATCTACGCCGGCATTTGGAGGAGCATCCACAAGTTACCTCCCTGCCCAAACGCCCTAATGTAGAGTCATTAGCCGATTTCTTTTACCCAGACTCCAAAAATGTAGGCGAAGAGCAGCTGAAGCTATTGATTCGTCAAGATTTAATGGCAGGCCATTTTCAACGCTTCTATTCAATAACCAATCAATCTGGCTATGAAATCGATCTGGACAGTTCAGAAACTGATAGCGAAGGTGAAGCAGAGCCAGCGTCACAATATGATTCGGAATACTATAACTGTGAGCTGTGCCCGCAAAGATATGCGCGAAAGTATCAGCTTTACGATCACCAGCGTCAAATCCATCCCTGGTTGGAGGCTCCCCATGTCTGTGGTCGCTGTCAGGCCAGATTCGTCAGTCTACAACTTCTGCGACACCATAATGAGTCACAGTGCCGTAATGCCCAGAAAAGATTTCTTTGCTACAAGTGTCCGTTGCGGTTTCGATGGAAACACAATTTCAGAAGTCATATTCGGGAGCATCGAATTACCAATCAATCTTTTGAGTGCCCCGACTGCAAGCGCGTCTTCGACAAAAAGAAATCTCTCACAGTCCATTTACTCAGCGTCCATGCTGATGAGTCGAAATTGCTGCCCTGCCAGTGGTGCAGTCGTAAATTCTACCGCCGCGACTACCTTGTGAAGCATTTAAAACGGCATGGCTTCAAAGAGCAAGACATTCCACTAGCAGAGACGTTAATAGCGGCCACGTCAAAGCCCAACGGCGTTAAACGTATGACCTGTAAAATATGTAACTCTCGTTTCGAGCGAATCCATGAACTGCGTGCCCACATCCAACTAGAGCTGGGCCTGAAGCTAACGATGTCGTCTCCTGCATCAGGGCAGCCCAATATCAATTCACCCCTTAACTATTCCATAACCAATGAATCCGGTTTCGAACTGGAGTTAGGTGATTCGGAAACAGAAGACGAAATGCTAATGTCGGGAGTTAGCGGTGGACAGCACGTTGGCTACATGTGTGAGCTGTGCAGTATACAGTGTCGACGCAAATACGAAATGATTCAGCACCAACGGGCCATGCATCGATTCGATAAGATGCCTTACGAGTGTGAAATGTGCATCTTTAAGTGCGTTTCAAAGAGCATTATGGACCATCATCGGTTGGGACAATGTGGTAACTTGCATAAAAAATATTCATGCACTAAATGCAGTTACAAATTTATGTGGCCAGAAAACCTTGAGCAGCATCTCCACTTGCAGCATGGCCACATTTTATCCTCGACTGATGACCATATATTAATCAGCAATGCTTTCCCATTGGCCAATACCATTGCCAAAGAAGAGCAATCTCATACGCAAATGGATGTCCAGTTACTTCAATGTCCGCACTGTGATAGAACCTATCAAATGAAGTCCCGTCTAAACAACCACATCCGCGATGTGCATGTAAATGGGGATCGTAAGCGAAAGGAAGCGGAAAAAAGATTCCTCTGCTCCCTGTGCGGACGCGAGACAAAGACGGCCGCTTGTCTAGTTACTCACATGCGACGACATACTGGAGAGAAGCCCTTTAAATGCGATTTTTGTGAAATGGCCTTCCCCAGACACTCTGAAATGACAGCACACCGGCGAATGCATACAGGTGAAAAACCATACCATTGCACGGTCTGTGGCAAGGACTTCGCTCGCTCCGACAAGTTAAAGAGGCACATGCTAACGCACAGTGGATTGAAACCACATGCATGCACCTATTGCGAGAAAAGTTATAGGCAGGCGAAGGATCTGAAGTTGCATTTGCAACAGCACACTGGAGAGTCTCCCTTTATTTGTGGCACCTGTGGAGAGAGGTTTATACAGAGTAGCACACTGGAGAAGCACCGAATGATGCGGCGACATTTTGATGAGGTCGAGGGGGCGTCAATGGCATTGACACGAAATTAG
Protein Sequence: MKMPVVCRTCDASAKDTDKLYNLNTPSKEYPDKLLSEILGELINIDLKMHLPSDQKLPQSLCSCCLKRLTASYDYVKQALSANTLLMRQLQDCLQESPMELCAEQHVEVKMETEGDDSNDENTESGKITCTELPNLEEAAAVGGNDDDTKRQIDPLIMLDPTAVKKENETHQPNIEEEDEMGNADCDDDDFDPDDDEDEDSLDNIPLQQRALKWKKKRGTLKLTRRRPFQCSQCSKSFISGESLKKHKFRIHQASGLFSCSLCIRKFNRQETLETHLKVHSESKRSSHLSEHKKAKSIDVNLCKPHGYKLIECMLCQTQYNKISDLRRHLEEHPQVTSLPKRPNVESLADFFYPDSKNVGEEQLKLLIRQDLMAGHFQRFYSITNQSGYEIDLDSSETDSEGEAEPASQYDSEYYNCELCPQRYARKYQLYDHQRQIHPWLEAPHVCGRCQARFVSLQLLRHHNESQCRNAQKRFLCYKCPLRFRWKHNFRSHIREHRITNQSFECPDCKRVFDKKKSLTVHLLSVHADESKLLPCQWCSRKFYRRDYLVKHLKRHGFKEQDIPLAETLIAATSKPNGVKRMTCKICNSRFERIHELRAHIQLELGLKLTMSSPASGQPNINSPLNYSITNESGFELELGDSETEDEMLMSGVSGGQHVGYMCELCSIQCRRKYEMIQHQRAMHRFDKMPYECEMCIFKCVSKSIMDHHRLGQCGNLHKKYSCTKCSYKFMWPENLEQHLHLQHGHILSSTDDHILISNAFPLANTIAKEEQSHTQMDVQLLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAEKRFLCSLCGRETKTAACLVTHMRRHTGEKPFKCDFCEMAFPRHSEMTAHRRMHTGEKPYHCTVCGKDFARSDKLKRHMLTHSGLKPHACTYCEKSYRQAKDLKLHLQQHTGESPFICGTCGERFIQSSTLEKHRMMRRHFDEVEGASMALTRN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00600468;
90% Identity: iTF_00555245;
80% Identity: iTF_00555245;