Basic Information

Insect: Drosophila simulans
Gene Symbol: stc
Assembly: GCA_016746395.1
Location: NC:14918306-14923002[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 2 1.4e+04 -4.2 1.6 15 19 426 430 425 430 0.81

2 12 0.049 3.4e+02 1.0 2.2 4 11 459 466 458 467 0.91

3 12 6.1e-07 0.0042 16.7 15.1 1 19 471 488 471 488 0.93

4 12 2.2e-07 0.0015 18.1 17.3 1 18 524 541 524 542 0.97

5 12 8.2e-08 0.00056 19.5 16.3 1 19 582 600 582 600 0.98

6 12 0.00015 1 9.1 18.0 4 19 648 663 641 663 0.88

7 12 1.9 1.3e+04 -4.0 1.3 5 10 680 685 680 685 0.92

8 12 0.23 1.6e+03 -1.1 12.6 1 18 703 724 703 725 0.76

9 12 4.9e-10 3.4e-06 26.6 15.5 1 18 730 747 730 748 0.97

10 12 1.6 1.1e+04 -3.8 13.3 9 18 794 804 784 805 0.82

11 12 4.2e-08 0.00029 20.4 11.4 1 17 841 857 841 863 0.93

12 12 4.4e-07 0.003 17.2 14.8 1 19 873 892 873 892 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	2	1.4e+04	-4.2	1.6	15	19	426	430	425	430	0.81
2	12	0.049	3.4e+02	1.0	2.2	4	11	459	466	458	467	0.91
3	12	6.1e-07	0.0042	16.7	15.1	1	19	471	488	471	488	0.93
4	12	2.2e-07	0.0015	18.1	17.3	1	18	524	541	524	542	0.97
5	12	8.2e-08	0.00056	19.5	16.3	1	19	582	600	582	600	0.98
6	12	0.00015	1	9.1	18.0	4	19	648	663	641	663	0.88
7	12	1.9	1.3e+04	-4.0	1.3	5	10	680	685	680	685	0.92
8	12	0.23	1.6e+03	-1.1	12.6	1	18	703	724	703	725	0.76
9	12	4.9e-10	3.4e-06	26.6	15.5	1	18	730	747	730	748	0.97
10	12	1.6	1.1e+04	-3.8	13.3	9	18	794	804	784	805	0.82
11	12	4.2e-08	0.00029	20.4	11.4	1	17	841	857	841	863	0.93
12	12	4.4e-07	0.003	17.2	14.8	1	19	873	892	873	892	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAGCAGTTGACCAACGGCGCCGGAGAAGCGGGACCCAGCCATGAGTCACCCGGCATGGCGGACTGCAACGGAGGTCACGAATCGGCGCCAGCGGGTGGTTCCTACAACAGGcagggcaacaacaattacgtGAACTTCAATCAGTTCATTATGCAGCACAATCTGGGTGGAGGAGCACCCTCCAATGCCACCAGCACTATGCAACAACCGCTGGGCAGCAGCTTCACCAACTACTCActgggcggcggtggaggtgCCTTTGGACTGAACCCACCAGTGGCCCCGAGTACCAGCAACTTTGTAAATTTTTACTCGCAGGCCATGTTCCCAACCAATCAAAATGGCGATGGCATCGCTAGAGTCACCTTCACCAGCAGCTATGGGTTGGACAATCCGAGCAACAGCACTTTTTCGAGTTTTTACACACCTTTTGGCACCAATCCGTTTGACTTCAGCGCTTCCAAGCTGCAGGCCTCGGCTCCGGAATTCGTGCCCAATTTCGCCAAGCTGAGTCTAGAAGAGACACCGGCAGCCAATACGAACGGAAACAGCACTGCCAGCCTAGAGACTGCCATAAATGAGTCGAGACCTAGTACTCTGCGAGCTCAAGAACCACCTGAACGAGGAGCTAACAACCACCGCTCGAACAACAATTACGAACGGGAGCGTGAGCGGGAACGGGACCGGGACAGGGATAGGGACGGGGACCGGGACAGGGACAGGGATCGGGACCAGGACAGGGACCGTGACAGGGACAGGGACCGGGACCGGGACAGGGACTCTAGACCCGGAAATTCGCGACAACAACGCCGCTCCGACTATCGGGACGATCGGGAGGACCGGTACGAACGAAGCGATCGTAGGAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAACAAACGCAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCCAGGGCCGTTGACGATTTGGACACGAGCAATGAGAGCGCACACCCATCGCCCGAAAAGCAGTCGCAGCTGAAGCAAAACTCCCCAAGGAGAGGTCCACCGCTACCACCGGCGGATAATGAAAAACTATCGCAGCGAGAGAAACTGATTCGCGACATCGAACAGCGCCGATTGGAGTGCCTTGTATGCGTGGAGGCGATCAAGTCGCACCAGCCAACCTGGTCGTGCAGGAACTGTTATCACATGCTGCACCTCAAGTGCACCATCACCTGGGCGAACAGCTCCAAGTCCGAAGTGGGCTGGCGTTGTCCAGCTTGCCAGAATGTGCTGCAGGAGTTGCCACGCGACTATCTCTGCTTCTGCGGCAAACTGAAAAACCCGCCGGTATCACGGACCGAATTGGCCCACAGCTGTGGCGAGGTCTGCTGCCGGATCGAGGGTTGTAGCCACGCCTGCACCCTGCTCTGTCACCCGGGTCCTTGCCCGCCGTGCCAGGCCAACGTGGTGCGCAGCTGTGGATGTGGACGCAGCTCAAAAACGATGCAGTGCGCCATGAAGGAAGTGGTGCTCTGCGGCGAGATTTGCGACAAGGTGCTTAACTGTGGCGAGCATCGCTGTCAGGCGGAGTGCCACTCGGGCAAGTGCGAGCCGTGTCACGAGCAAGTGGAGCAGCGTTGCCACTGCGACAAGCAGGAGCGCAAGGTGCAGTGCACGCGAGAAACGCAGGACAAACGCTGCTATTCGTGCAAGGACAGCTGCGGTCAACCGCTTCCCTGCGGCCACCACAAGTGCAAGGACTCCTGCCACGCGGGAAGTTGTAGACCCTGCAAGCTGAGTCCCGAGCAGATAACCAGTTGTCCTTGCGGCAAAATGCCTATACCGGCTGGCCAGCGTTCAAGCTGCCTGGACCCGATTCCCACATGCGAGGGCATCTGCTCTCGGACGTTACGTTGTGGAAAGCCGGCGCATCCGCATCAATGCGGAAGCAAGTGCCACTTGGGCCAGTGCCCTCCATGTCCCAAGCAGACCGCTGTAAAGTGCCGTTGCGGCCACATGGACCAAATGATCAAGTGTCGGCAGCTATGTAACAGAGCGGACGACGCCCGCTGCAAGCGACGTTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACACCGAGTGCTGCATCGATATAGACCACGACTGTCCACTGCCCTGTAATCGAACACTCAGTTGTGGCAAGCACAAGTGCGATCAGCCGTGCCACCGCGGCAATTGTCCGCCATGCTATCGCAGCAGTTTCGAGGAGCTCTACTGCGAGTGTGGTGCCGAAGTGATCTACCCACCAGTGCCGTGCGGCACCAAGAAGCCAATCTGCAAGCTCCCTTGCTCGCGCATCCATCCATGCGATCATCCACCGCAGCACAACTGCCATTCGGGCCCCACCTGCCCGCCCTGCATGATCTTCACCGCGAAATTGTGTCACGGCAACCACGAGCTGCGCAAGACCATTCCCTGCTCGCAGCCCAGCTTCAGCTGTGGCATGGCCTGTGGCAAGCCGTTGCCGTGTGGCGGGCACAAGTGTATAAAGCCGTGTCACGAGGGCCCCTGCCAGTCTGCCGCCGAGATCTGCCGGCAGAGCTGCACCAAGTCACGATCGAACTGTGGTCACAAGTGTGCAGCTCCCTGTCACGAGGGAGCCTGTCCGGAAACACCGTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGAAAGCAGAACCGCAGCTGCCAGGAACTAGCCAGGGAGCACAGTCGTATAGCCACCATCCAGCTGGCCTCGTCCATGGCAGAGATGTCACGCGGCAATTACATGGAGCTCAGCGAAATTTTGGCTCCAGCCaaaaaatctaataaaacTTTGGATTGCAACGACGAATGTCGTCTACTCGAGAGGAATCGTCGATTGGCCGTGGCCCTCTCTTCTGGAAATTCCGATACAAAGCTAAAGTCTCTAACCAAGTACTCGGAGTTTGTTCGTAGCTTCGCAAAGAAGAACGCAGCGCTGACCAAAAGCGTTTACGAGACATTGACCGACCTGGTAAAGTTGGCCAAGGAAAGCAAGCAACGCTCGAGGAGCCACTCTTTCCCCACCATGAACCGCGAAAAGAGGCAGCTGGTGCACGAGTTGTGCGAGGTATTTGGAATTGAATCGGTTTCGTATGACAAGGAGCCAAATCGCAACGTTGTGGCCACGGCCCATAGGGATAGGTGCTGGTTCCCCGCCACGAGCATCATGGAAGTGCTGGCTCGCGAGTCCGGACAACGCCGCGTTCCGGTGCCCAGTAACAATGCTTGGGGCTTAAAGAAGTAA
Protein Sequence: MAEYWQQLTNGAGEAGPSHESPGMADCNGGHESAPAGGSYNRQGNNNYVNFNQFIMQHNLGGGAPSNATSTMQQPLGSSFTNYSLGGGGGAFGLNPPVAPSTSNFVNFYSQAMFPTNQNGDGIARVTFTSSYGLDNPSNSTFSSFYTPFGTNPFDFSASKLQASAPEFVPNFAKLSLEETPAANTNGNSTASLETAINESRPSTLRAQEPPERGANNHRSNNNYERERERERDRDRDRDGDRDRDRDRDQDRDRDRDRDRDRDRDSRPGNSRQQRRSDYRDDREDRYERSDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQSQLKQNSPRRGPPLPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHQPTWSCRNCYHMLHLKCTITWANSSKSEVGWRCPACQNVLQELPRDYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEVVLCGEICDKVLNCGEHRCQAECHSGKCEPCHEQVEQRCHCDKQERKVQCTRETQDKRCYSCKDSCGQPLPCGHHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPIPAGQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLCNRADDARCKRRCTKKRSCGKHKCNTECCIDIDHDCPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKLPCSRIHPCDHPPQHNCHSGPTCPPCMIFTAKLCHGNHELRKTIPCSQPSFSCGMACGKPLPCGGHKCIKPCHEGPCQSAAEICRQSCTKSRSNCGHKCAAPCHEGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATIQLASSMAEMSRGNYMELSEILAPAKKSNKTLDCNDECRLLERNRRLAVALSSGNSDTKLKSLTKYSEFVRSFAKKNAALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHRDRCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00619522; iTF_00592774; iTF_00592071; iTF_00540047; iTF_00505083; iTF_00543423;
90% Identity: iTF_00592774; iTF_00540047;
80% Identity: -