Dmel012940.1
Basic Information
- Insect
- Drosophila melanogaster
- Gene Symbol
- stc_1
- Assembly
- GCA_000001215.4
- Location
- JANZWZ010001213.1:1115014-1118782[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 2 2.2e+04 -4.1 1.6 15 19 394 398 393 398 0.81 2 12 0.018 2e+02 2.4 4.5 13 19 430 436 429 436 0.91 3 12 4.9e-08 0.00055 20.2 11.7 1 19 472 490 472 490 0.97 4 12 6.7e-07 0.0075 16.6 15.0 1 19 530 548 530 548 0.97 5 12 0.00014 1.5 9.2 18.0 4 19 596 611 589 611 0.88 6 12 1.8 2e+04 -4.0 1.3 5 10 628 633 628 633 0.92 7 12 0.092 1e+03 0.2 11.7 1 18 651 672 651 673 0.77 8 12 4.7e-10 5.2e-06 26.7 15.5 1 18 678 695 678 696 0.97 9 12 2 2.2e+04 -5.0 14.7 9 18 742 752 729 753 0.82 10 12 2 2.2e+04 -4.5 0.4 8 11 758 761 758 761 0.83 11 12 1.1e-07 0.0013 19.0 12.9 1 17 789 805 789 811 0.93 12 12 5.1e-07 0.0056 17.0 13.1 1 19 821 840 821 840 0.96
Sequence Information
- Coding Sequence
- ATGGCTGAGTACTGGCAGCAGTTGACCAACGGCGCCGGAGAAGCGGGACCCGGCAATGAGTCATCCGCCATGGCAGACTGCAACGGAGGTCACGAATCGGCGGCAGTGGGTGGTTCCTGCAACAGGCACAGCAACAACAATTACGTGAACTTCAATCAGTTCATTATGCAGCACAATCTGGGTGGAGGAGCGCCCTCGAATGCCACCAGCACTATGCAGCATCCGGTGGGCAGCAGCTACACTAACTTCTCCCTGGGCGGCGTGGCATCCGCGAGTACCAGCCACTTTGCAAATTTTTACTCGCAGGCCATGATCCCAACCTATCAAAATGGCGATGGCATCGCTAGAGTCACCGTCACCAGCAGCTATGGGTCGGTCAATCCGAGCAACAGCAATTTTTCGAGTTTTTACACACCTTTTGGCAATAATCCGTTTGACTTCAGCGCTTCCAAGCTGCAGGCCTCGGCTCCGGAATTCGTGCCCACTCTCGCCAAGCTGAGTCTAGAAGAGACACCGGCAGCCGCCACTACGAACGGAAACAGCACTGCCAGCCTAGAGACTGCCATAAATGAGACGAGACCTAGGACTCTGCGAGCCCAAGAACCAGCTGAACGAGGAGCTAACAACCAATGCTCGAACCATAATTACGAACGGGAGCGGGACAGAGACCGGGACAGAGACCGGGACAGGGACAGGGACTCTAGACCCGGAAATACGCGACAACAACGCCGCTCCGACTATCGGGACGATCGGGAGGACCGGTACGAAAGAAGCGATCGTAGGAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAATAAACGCAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCCAGGGCCGTTGACGATTTGGACACGAGCAATGAGAGCGCACACCCATCGCCCGAAAAGCAGTCGCAGCTGCAGCAAATCTCGCCAAGGCGAGGTCCACCGCTACCACCGGCGGATAACGAAAAACTATCGCAGCGAGAGAAACTGGTTCGCGACATCGAACAGCGCCGATTGGAGTGCCTTGTATGCGTGGAGGCGATCAAGTCGCACCAGCCAACCTGGTCGTGCAGGAACTGCTATCACATGCTGCACCTTAAGTGCACCATCACCTGGGCGAGTAGCTCCAAGTCCGAGGTGGGCTGGCGTTGTCCAGCTTGCCAGAATGTGCTGCAGGAGTTTGCCACGCGACTATCTCTGCTTTTGCGGCAAACTGAAAAACCCGCCGGTATCACGGACCGAATTGGCCCACAGCTGGGCCCTTGCCCGCCGTGCCAGGCCAACGTGGTGCGCAGCTGTGGATGTGGACGCAGCACAAAAACGATGCAGTGCGCCATGAAGGAAGAGGTGCTCTGCGGCGAGATCTGCGACAAGCTGCTTAACTGTGGCGAGCATCGCTGCCAGGCGGAGTGCCACTCGGGCAAGTGCGCGGCGTGTTCCGAGCAAGTGGTGCAGCAGTGCCACTGCGGCAAGCAGGAGCGCAAGGTGCCATGCACGCGAGAATCGCAGGACAAACGCACCTATTCGTGCAAGGACAGCTGCGGTCAACCGCTTCCCTGCAGCCACCACAAGTGCAAGGACTCCTGCCACGCGGGAAGTTGTAGACCCTGCAAGCTGAGTCCCGAGCAGATAACAAGTTGTCCTTGTGGCAAAATGCCTGTACCGGCTGGCCAGCGTTCAAGCTGCCTGGACCCGATTCCCACATGCGAGGGCATCTGCTCTAGGACATTACGTTGTGGAAAGCCAGCGCATCCGCATCAATGCGGAAGCAAATGTCACTTGGGCCAGTGCCCTCCATGTCCCAAGCAGACCGGTGTAAAGTGTCGTTGCGGCCACATGGACCAAATGATAAAGTGTCGGCAGCTATGTAACAGAGCGGACGACGCCCGCTGCAAGCGACGTTGCACCAAGAAGCGCAGCTGTGGAAAGCACAAGTGCAACGTTGAGTGCTGCATCGATATAGACCACGACTGTCCACTGCCATGTAATCGAACCCTCAGTTGTGGCAAACACAAGTGCGATCAGCCGTGTCACCGCGGCAATTGTCCGCCATGCTACCGCAGCAGTTTCGAAGAGCTCTATTGCGAGTGTGGTGCCGAAGTGATCTATCCACCAGTGCCGTGTGGCACCAAGAAGCCAATCTGCAAGCTTCCTTGCTCGCGCATTCATCCATGCGATCATCCGCCGCAGCACAACTGCCATTCGGGCCCCACCTGTCCGCCCTGCATGATTTTCACGACGAAATTGTGTCACGGCAACCACGAGCTGCGCAAGACCATTCCCTGCTCGCAGCCCAACTTTAGCTGTGGCATGGCCTGTGGCAAGCCGTTGCCGTGTGGCGGGCACAAGTGTATAAAGCCATGTCACGAGGGCCCCTGTCAGTCTGCCGGCGAGATATGCCGGCAGAGCTGCACCAAGCCACGACCGACCTGTGGTCATAAGTGTGCAGCTGCCTGTCACGAGGGAGCCTGTCCGGAAACGCCTTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGAAAGCAGAACCGCAGCTGCCAGGAACTAGCCAGGGAGCACAGTCGTATAGCCACCATCCAGCTGGCCTCGTCCATGGCAGAGATGTCACGCGGCAATTACATGGAGCTCAGCGAAATCTTGGCTCCAGCCAAGAAATCTAATAAAACTTTGGATTGCAACGACGAATGTCGTCTACTGGAGAGGAATCGTCGACTTGCCGCGGCCCTGTCTTCTGGAAATTCCGATACAAAGCAAAAGTGTCTAACCAAGTACTCGGAGTTTGTTCGTGGCTTCGCAAAGAAGAACCCAGCGCTGACCAAGAGCGTTTACGAGACGTTGACCGACCTGGTAAAGTTGGCCAAGGAAAGCAAGCAACGGTCGAGGAGCCACTCTTTCCCCACCATGAACCGCGAAAAGAGGCAGCTGGTGCACGAGTTGTGCGAGGTATTTGGGATTGAATCGGTTTCCTATGACAAGGAGCCAAATCGCAACGTTGTTGCCACGGCCCATAAGGATAGGTGCTGGTTCCCCGCCACGAGCATCATGGAAGTGCTGGCTCGCGAGTCCGGACAACGCCGTGTCCCGGTGCCCAGTAACAATGCTTGGGGATTGAAGAAGTAG
- Protein Sequence
- MAEYWQQLTNGAGEAGPGNESSAMADCNGGHESAAVGGSCNRHSNNNYVNFNQFIMQHNLGGGAPSNATSTMQHPVGSSYTNFSLGGVASASTSHFANFYSQAMIPTYQNGDGIARVTVTSSYGSVNPSNSNFSSFYTPFGNNPFDFSASKLQASAPEFVPTLAKLSLEETPAAATTNGNSTASLETAINETRPRTLRAQEPAERGANNQCSNHNYERERDRDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDRYERSDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQSQLQQISPRRGPPLPPADNEKLSQREKLVRDIEQRRLECLVCVEAIKSHQPTWSCRNCYHMLHLKCTITWASSSKSEVGWRCPACQNVLQEFATRLSLLLRQTEKPAGITDRIGPQLGPCPPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLLNCGEHRCQAECHSGKCAACSEQVVQQCHCGKQERKVPCTRESQDKRTYSCKDSCGQPLPCSHHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAGQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTGVKCRCGHMDQMIKCRQLCNRADDARCKRRCTKKRSCGKHKCNVECCIDIDHDCPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKLPCSRIHPCDHPPQHNCHSGPTCPPCMIFTTKLCHGNHELRKTIPCSQPNFSCGMACGKPLPCGGHKCIKPCHEGPCQSAGEICRQSCTKPRPTCGHKCAAACHEGACPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATIQLASSMAEMSRGNYMELSEILAPAKKSNKTLDCNDECRLLERNRRLAAALSSGNSDTKQKCLTKYSEFVRGFAKKNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKDRCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597038;
- 90% Identity
- -
- 80% Identity
- -