Basic Information

Insect: Drosophila sechellia
Gene Symbol: stc
Assembly: GCA_004382195.1
Location: NC:14803689-14808538[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.4e+04 -4.1 1.6 15 19 416 420 415 420 0.81

2 14 0.049 3.3e+02 1.0 2.2 4 11 449 456 448 457 0.91

3 14 6e-07 0.0041 16.7 15.1 1 19 461 478 461 478 0.93

4 14 2.1e-07 0.0015 18.2 17.3 1 18 514 531 514 532 0.97

5 14 8.1e-08 0.00056 19.5 16.3 1 19 572 590 572 590 0.98

6 14 0.00014 0.99 9.1 18.0 4 19 638 653 631 653 0.88

7 14 1.9 1.3e+04 -4.0 1.3 5 10 670 675 670 675 0.92

8 14 0.043 3e+02 1.2 9.1 1 11 693 703 693 704 0.94

9 14 1.3 8.9e+03 -3.5 0.8 4 10 708 714 707 714 0.72

10 14 4.9e-10 3.3e-06 26.6 15.5 1 18 720 737 720 738 0.97

11 14 2 1.4e+04 -5.1 14.9 9 18 784 794 771 795 0.81

12 14 2 1.4e+04 -4.5 0.4 8 11 800 803 800 803 0.83

13 14 4.2e-08 0.00029 20.4 11.4 1 17 831 847 831 853 0.93

14 14 9e-06 0.062 13.0 16.6 1 19 863 882 863 882 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.4e+04	-4.1	1.6	15	19	416	420	415	420	0.81
2	14	0.049	3.3e+02	1.0	2.2	4	11	449	456	448	457	0.91
3	14	6e-07	0.0041	16.7	15.1	1	19	461	478	461	478	0.93
4	14	2.1e-07	0.0015	18.2	17.3	1	18	514	531	514	532	0.97
5	14	8.1e-08	0.00056	19.5	16.3	1	19	572	590	572	590	0.98
6	14	0.00014	0.99	9.1	18.0	4	19	638	653	631	653	0.88
7	14	1.9	1.3e+04	-4.0	1.3	5	10	670	675	670	675	0.92
8	14	0.043	3e+02	1.2	9.1	1	11	693	703	693	704	0.94
9	14	1.3	8.9e+03	-3.5	0.8	4	10	708	714	707	714	0.72
10	14	4.9e-10	3.3e-06	26.6	15.5	1	18	720	737	720	738	0.97
11	14	2	1.4e+04	-5.1	14.9	9	18	784	794	771	795	0.81
12	14	2	1.4e+04	-4.5	0.4	8	11	800	803	800	803	0.83
13	14	4.2e-08	0.00029	20.4	11.4	1	17	831	847	831	853	0.93
14	14	9e-06	0.062	13.0	16.6	1	19	863	882	863	882	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTTCTGGCAGCAGTTGACCAACGGCGCCGGAGAAGCGGGACCCAGCCATGAGTCACCCGCCATGGCAGACTGCAACGGAGGTCACGAATCGGCGCCAGCGGGTGGTTCCTACAACAGGCagggcaacaacaattacGTGAACTTCAATCAGTTCATTATGCAGCACAATCTGGGTGGAGGAGCGCCCTCCAATGCCGCCAGCACTATGCAACAACCGCTGGGCAGCAGCTTCACAAACTACTCACTGGGCGCCGGTGGAGGTGCCTTTGGACTGAACCCACCAGTGGCCCCGAGTACCAGCAACTTTGTAAATTTTTACTCGCAGGCCATGTTCCCAACCTATCAAAATGGCGATGGCATCGCTAGAGTCACCCTCACCAGCAGCTATGGGTTGGACAATCCGAGCAACAGCACTTTTTCGAGTTTTTACACACCTTTTGGCACCAATCCGTTCGACTTCAGCGCTTCCAAGCTGCAGGCCTCGGCTCCGGAATTCGTGCCCAATTTCGCCAATCTGAGTCTAGAAGAAACACCGGCAGCCACTACGAACGGAAACAGCACTGCCAGCCTAGAGACTGCCATAAATGAGTCGAGACCTAGGACTCTGCGAGCTCAAGAACCACCTGAACGAGGAGCTAACAACCACCGCTCGAACAACAATTACGAACGGGAGCGTGAGCGGGAACAGGACCGGGACAGGGACAGGGATCGGGACCAGGACAGGGACCGTGACAGGGACAGGGACCGGGACAGGGACTCTAGACCCGGAAATACGCGACAACAACGCCGCTCCGACTATCGGGACGATCGGGAGGACCGGTACGAACGAAGCGATCGTAGGAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAACAAACGCAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCCAGGGCCGTTGACGATTTGGACACGAGCAATGAGAGCGCACACCCATCGCCCGAAAAGCAGTcgcagcaaaagcaaatctCCCCAAGGAGAGGCCCACCGCAACCACCGGCGGATAACGAAAAACTATCGCAGCGAGAGAAACTGATTCGCGACATCGAACAGCGCCGATTGGAGTGCCTTGTATGCGTGGAGGCGATCAAGTCGCACCAGCCAACCTGGTCGTGCAGGAACTGTTATCACATGCTGCACCTCAAGTGCACCATCACCTGGGCGAGCAGCTCCAAGTCCGAAGTGGGCTGGCGTTGTCCAGCTTGCCAGAATGTGCGGCAGGAGTTGCCACGCGACTATCTCTGCTTCTGCGGCAAACTGAAAAACCCGTCGGTATCACGGACCGAATTGGCCCACAGCTGTGGCGAGGTCTGCTGCCGGATCGAGGGTTGTAGCCACGCCTGCACTCTGCTCTGTCACCCGGGTCCTTGCCCGCCGTGCCAGGCCAACGTGGTGCGcagatgtggatgtggacgcAGCTCCAAAACGATGCAGTGCGCCATGAAGGAAGAGGTGCTCTGCGGCGAGATCTGCGACAAGGTGCTTAACTGTGGCGAGCATCGCTGCCAGGCGGAGTGCCACTCGGGCAAGTGCGAGCCGTGTCACGAGCAAGTGGAGCAGCGTTGCCACTGCGACAAGCAGGAGCGCAAGGTGCAGTGCACGCGAGAAACGCAGGACAAACGCCGCTATTCGTGCAAGGACAGCTGCGGTCAGCCGCTTCCCTGCGGCCACCACAAGTGCAAGGACTCCTGCCACGCGGGAAGTTGTAGACCCTGCAAGCTGAGTCCCGAGCAGATAACCAGTTGTCCTTGCGGCAAAATGCCTATACCGGCTGGCCAGCGTTCAAGCTGCCTGGATCCGATTCCCACATGCGAGGGCATCTGCTCTCGGACGTTGCGTTGTGGAAAGCCGGCGCATCCGCATCAATGCGGAAGCAAGTGCCACTTGGGCCAGTGCCCTCCATGTCCCAAGCAGACTGCTGTAAAGTGCCGTTGCGGCCACATGGACCAAATGATCAAGTGTCGGCAGCTATGTAACAGAGCGGACGACGCCCGCTGCAAGCGACGGTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACACCGAGTGCTGCATCGATATAGACCACGTCTGTCCACTGCCCTGTAATCGAACACTCAGTTGTGGCAAGCACAAGTGCGATCAGCCGTGCCACCGCGGCAATTGTCCGCCATGCTATCGCAGCAGTTTCGAGGAGCTCTTCTGCGAGTGTGGTGCCGAAGTGATCTACCCACCAGTGCCGTGCGGCACCAAGAAGCCAATCTGCAAGCTCCCTTGCTCGCGCATCCATCCATGCGATCATCCACCGCAGCACAACTGCCATTCGGGCCCCTCCTGTCCGCCCTGCATGATCTTCACCGCGAAATTGTGTCACGGCAACCACGAGCTGCGCAAGACCATTCCCTGCTCGCAGCCCAGCTTCAGCTGTGGCATGGCCTGTGGCAAGCCGTTGCCGTGTGGCGGGCACAAGTGCATAAAGCCGTGTCACGAGGGCCCCTGTCAGTCTGCCGCCGAGATCTGCCGGCAGAGCTGCACCAAGCCACGACCGAACTGTGGTCACAAGTGTGCAGCTCCCTGTCACGAGGGAGGCTGTCCGGAAACGCCTTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCAACCGAAAGCAGAACCGCAGCTGCCAGGAACTAGCCAGGGAGCACAGTCGTATAGCCACCATCCAGCTGGCCTCGTCTATGGCAGAGATGTCACGCGGCAATTACATGGAGCTCAGCGAAATCTTGGCTCCAGCCAAAAAATCTAATAAAACTTTGGATTGCAACGACGAATGCCGTCTACTCGAGAGGAATCGTCGATTGGCCGCGGCCCTGTCTTCTGGAAATTCCGATACAAAGCTAAAGTCTCTAACCAAGTACTCGGAGTTTGTTCGTAGCTTCGCCAAGAAGAACGCAGCGCTGACCAAGAGCGTTTACGAGACATTGACCGACCTGGTAAAGTTGGCCAAGGAAAGCAAGCAACGCTCGAGGAGCCACTCTTTCCCCACCATGAACCGCGAAAAGAGGCAGCTGGTGCACGAGTTGTGCGAGGTATTTGGGATTGAATCGGTTTCGTATGACAAGGAGCCAAATCGCAACGTTGTGGCCACGGCCCATAAGGATAGGTGCTGGTTCCCCGCCACGAGCATCATGGAAGTGCTGGCTCGCGAGTCCGGACAACGCCGCGTTCCGGTGCCCAGTAACAATGCTTGGGGCTTGAAGAAGTAA
Protein Sequence: MAEFWQQLTNGAGEAGPSHESPAMADCNGGHESAPAGGSYNRQGNNNYVNFNQFIMQHNLGGGAPSNAASTMQQPLGSSFTNYSLGAGGGAFGLNPPVAPSTSNFVNFYSQAMFPTYQNGDGIARVTLTSSYGLDNPSNSTFSSFYTPFGTNPFDFSASKLQASAPEFVPNFANLSLEETPAATTNGNSTASLETAINESRPRTLRAQEPPERGANNHRSNNNYEREREREQDRDRDRDRDQDRDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDRYERSDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQSQQKQISPRRGPPQPPADNEKLSQREKLIRDIEQRRLECLVCVEAIKSHQPTWSCRNCYHMLHLKCTITWASSSKSEVGWRCPACQNVRQELPRDYLCFCGKLKNPSVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRRCGCGRSSKTMQCAMKEEVLCGEICDKVLNCGEHRCQAECHSGKCEPCHEQVEQRCHCDKQERKVQCTRETQDKRRYSCKDSCGQPLPCGHHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPIPAGQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLCNRADDARCKRRCTKKRSCGKHKCNTECCIDIDHVCPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKKPICKLPCSRIHPCDHPPQHNCHSGPSCPPCMIFTAKLCHGNHELRKTIPCSQPSFSCGMACGKPLPCGGHKCIKPCHEGPCQSAAEICRQSCTKPRPNCGHKCAAPCHEGGCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATIQLASSMAEMSRGNYMELSEILAPAKKSNKTLDCNDECRLLERNRRLAAALSSGNSDTKLKSLTKYSEFVRSFAKKNAALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKDRCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00597038;
90% Identity: iTF_00597038;
80% Identity: -