Basic Information

Insect: Drosophila santomea
Gene Symbol: stc
Assembly: GCA_016746245.1
Location: NC:20443994-20448565[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.4e+04 -4.1 1.6 15 19 397 401 396 401 0.81

2 13 0.048 3.3e+02 1.1 2.2 4 11 430 437 429 438 0.91

3 13 5.9e-07 0.004 16.8 15.1 1 19 442 459 442 459 0.93

4 13 7.4e-08 0.0005 19.6 12.3 1 19 495 513 495 513 0.99

5 13 2 1.4e+04 -6.3 3.9 7 13 517 523 517 524 0.74

6 13 3.5e-09 2.4e-05 23.9 13.6 1 19 553 571 553 571 0.98

7 13 0.00014 0.97 9.2 18.0 4 19 619 634 612 634 0.88

8 13 0.062 4.3e+02 0.7 11.7 1 11 674 684 674 696 0.79

9 13 4.8e-10 3.3e-06 26.6 15.5 1 18 701 718 701 719 0.97

10 13 1.7 1.2e+04 -3.9 0.9 6 10 748 752 748 753 0.81

11 13 2 1.4e+04 -7.9 11.4 10 18 766 775 755 776 0.73

12 13 2.8e-07 0.0019 17.8 11.8 1 17 812 828 812 834 0.93

13 13 9.8e-08 0.00067 19.3 13.5 1 19 844 863 844 863 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.4e+04	-4.1	1.6	15	19	397	401	396	401	0.81
2	13	0.048	3.3e+02	1.1	2.2	4	11	430	437	429	438	0.91
3	13	5.9e-07	0.004	16.8	15.1	1	19	442	459	442	459	0.93
4	13	7.4e-08	0.0005	19.6	12.3	1	19	495	513	495	513	0.99
5	13	2	1.4e+04	-6.3	3.9	7	13	517	523	517	524	0.74
6	13	3.5e-09	2.4e-05	23.9	13.6	1	19	553	571	553	571	0.98
7	13	0.00014	0.97	9.2	18.0	4	19	619	634	612	634	0.88
8	13	0.062	4.3e+02	0.7	11.7	1	11	674	684	674	696	0.79
9	13	4.8e-10	3.3e-06	26.6	15.5	1	18	701	718	701	719	0.97
10	13	1.7	1.2e+04	-3.9	0.9	6	10	748	752	748	753	0.81
11	13	2	1.4e+04	-7.9	11.4	10	18	766	775	755	776	0.73
12	13	2.8e-07	0.0019	17.8	11.8	1	17	812	828	812	834	0.93
13	13	9.8e-08	0.00067	19.3	13.5	1	19	844	863	844	863	0.96

Sequence Information

Coding Sequence: ATGGCTGAGTACTGGCAGCAGTTGACCAACGGCACCGGAGAAGCGGGACCCGGCAATGAGTCACCCGCCATGGCCGCCTGCAACGGAGGTCACGAATCGGCGGCAGTTGGTGGCGCCAACAACAGtcacggcaacaacaattacgTGAACTTCAATCAGTTCATCATGCAGCACAATCTGGGTGGAGGAGCGCCCTCCAATGCCACTGGCACTATGCAACATCCGCTGGGCAGCAGCGACGCAAACTACTCCCTTGGTGGCGGTGGGGGAGCCTTTGGACTGAATCCACCAGTGGCATCTgcgagcagcaacaactttGCAAATTTTTACTCGCAGCCCATATTCCCATCTTATCAAAATGGCGACGGCATCGCCAGCGCCGCCTTTACCAACAGTTATGGATCGGGCAATCCGAGCAGCAGCAATTTTTCGAGTCTTTACACACCTTTTGGCAATAATCCGTTTGACTTCAGCGCTTCCAAGCTGCAGGCCTCGGCTCCGGAATTCGTGCCCAATTTGGCCAAGCTAAGTCTAGAAGAGACCCCGGCAGCTACTACGAACGGAAACAGCACTGCCAGCCTAGAGACTGCCATAAATGAGACGAGACCTAGGACTCTTCGAGCCCAAGAACCAGCTGAACGGGGAGCTAACAACCACCGCACGAACCACAATTATGAACGGGAGCGAGAGCGGGACCGTGACAGGGACTCTCGGCCCGGAAGTACGCGTCAACAACGCCGCTCCGACTATCGTGATGATCGGGAGGACCGATATGAACGAAGCGATCGTAGAAGGCCGCAGAAGCAGCAACGCTACGACAATCATCGCAGCAACAAACGAAGGGATGACTGGAATCGCAACAGGGACCGCATCAACGGCTTTCCGAGGGCCGTTGACGATTTGGACACGAGCAACGAGAGCGCCCACCCATCGCCCGAAAAGCAgtcacaacagcagcaaatcTCTCCACGGAGAGgtccaccgccaccaccggCGGATAACGAAAAACTATCGCAGCGAGAGAAACTTATTCGAGACATCGAGCAGCGCCGATTGGAGTGTCTTGTATGCGTGGAGCCGATCAAGGCGCACCAGCCAACCTGGTCGTGCCAGAACTGTTACCACTTGCTCCACCTCAAGTGCACCATCACTTGGGCGAGCAGCTCCAAGTCCGAGGTGGGCTGGCGTTGTCCAGCTTGCCAGAATGTGCTGCAGGAGTTGCCACGCGAGTATCTCTGCTTCTGCGGGAAACTGAAGAACCCACCGGTATCACGAACCGAATTGGCCCACAGCTGTGGCGAGGTTTGTTGCCGAATTGAGGGTTGTAGCCACGCTTGCACTTTGCTCTGTCACCCGGGCCCTTGCCCGCCGTGCCAGGCCAACGTGCTGCGTagctgtggatgtggacgcAGCTCAAAAACGATGCAGTGCGCCATGAAGGAAGAGCTGCTCTGTGGCGAGATCTGCGACAAGACGCTCAACTGTGGCGATCATCGGTGCCAGGCAGAGTGCCACTCGGGCAAGTGCGCAGCGTGCCCCGAACAAGTGGAGCAGCATTGCCACTGCGGCAAGCAGGAGCGCCAGGTGCAGTGCACGCGCGAAAGCCAGGACAAACGCAGCTATTCCTGCAAGGATAGTTGCGGTAAACCGCTTCCCTGCGGCAACCACAAGTGCAAGGACTCCTGCCACGCGGGAAGTTGTAGACCCTGTAAGCTGAGTCCCGAGCAGATAACCAGTTGTCCTTGCGGCAAAATGCCTGTACCGGCTGCCCAGCGTTCAAGCTGCCTGGACCCAATTCCCACTTGCGAGGGCATTTGCTCTAGGACGTTACGTTGTGGGAAGCCGGCGCACCCGCACCAATGCGGGAGCAAGTGTCACCTGGGCCAGTGCCCTCCATGTCCCAAGCAGACGGCTGTAAAGTGTCGTTGCGGCCACATGGACCAAATGATCAAATGCCGGCAGCTATCAAGTAGAGCAGACGATGCCCGCTGCAAGCGACGGTGCACCAAGAAGCGCAGCTGTGGAAAGCACAAGTGCAACGCCGAGTGCTGCATCGATATAGACCACGCTTGTCCACTGCCCTGTAATCGAACCCTAAGTTGTGGCAAACACAAGTGCGATCAGCCGTGTCACCGGGGCAATTGTCCGCCATGCTACCGCAGCAGTTTCGAGGAGCTGTACTGCGAGTGTGGTGCCGAAGTGATCTATCCACCAGTGCCGTGCGGCACCAAGAAACCAATCTGCAAGCGCCCCTGTTCGCGCTCTCATCCATGCGAGCATCCGCCGCAGCACAACTGCCATTCGGCGGCCGCCTGTCCGCCCTGCATGATGTTCACTACGAAATTCTGTCATGGCAACCACGAGCAGCGGAAGACCATTCCCTGCTCGCAGCCCAACTTCAGCTGTGGCCTGGCCTGTGGCAAGCCGTTGCAGTGTGGCGGGCACAAGTGTATAAAGCCGTGTCACGAGGGCGCCTGTCAGTCTGCCGGCGAGATCTGCCGCCAGAGCTGCACTAAGCCACGATCGAACTGTGGTCACAAGTGTGCATCTGTCTGCCACGAGGGAGCCTGTCCGGAAACGCCTTGCAAGGAGCTGGTGGAGGTGCAGTGCGAGTGCGGCCACCGAAAGCAGAACCGCAGCTGCCAGGAACTTGCCAGGGAGCACAGTCGTATAGCCACCATCCAGCTGGCCTCTTCCATGGCAGAGATGTCACGCGGCAATTACATGGAGCTCAGCGAAATCTTGGCTCCTGCcaaaaaatcaaatagaaCTTTGGATTGCAACGACGAATGTCGGCTACTGGAAAGGAATCGCCGACTGGCTGTGGCCCTGTCTTCTGGAAATCCCGATACAAAGCAAAAGTCCCTTACCAAGTACTCGGAGTTTGTTCGTGGGTTCGCTAAGAGAAATCCAGCGCTGACCAAGAGCGTTTACGAGACGTTGACCGACTTGGTAAAGTTGGCGAAGGAAAGCAAGCAACGGTCAAGGAGCCACTCCTTTCCCACGATGAACCGCGAAAAAAGGCAGCTAGTGCACGAATTGTGCGAGATATTTGGGATTGAATCGGTTTCCTATGACAAGGAGCCAAATCGGAATGTTGTGGCCACGGCTCATAAGGATAGGTGCTGGTTTCCCGCCACAAGCATCATGGAAGTGCTGGCTCGAGAGTCCGGGCAACGCCGTGTCCCGGTGCCCAGTAACAATGCTTGGGGCCTAAAGAAGTAG
Protein Sequence: MAEYWQQLTNGTGEAGPGNESPAMAACNGGHESAAVGGANNSHGNNNYVNFNQFIMQHNLGGGAPSNATGTMQHPLGSSDANYSLGGGGGAFGLNPPVASASSNNFANFYSQPIFPSYQNGDGIASAAFTNSYGSGNPSSSNFSSLYTPFGNNPFDFSASKLQASAPEFVPNLAKLSLEETPAATTNGNSTASLETAINETRPRTLRAQEPAERGANNHRTNHNYERERERDRDRDSRPGSTRQQRRSDYRDDREDRYERSDRRRPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAVDDLDTSNESAHPSPEKQSQQQQISPRRGPPPPPADNEKLSQREKLIRDIEQRRLECLVCVEPIKAHQPTWSCQNCYHLLHLKCTITWASSSKSEVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVLRSCGCGRSSKTMQCAMKEELLCGEICDKTLNCGDHRCQAECHSGKCAACPEQVEQHCHCGKQERQVQCTRESQDKRSYSCKDSCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRSSCLDPIPTCEGICSRTLRCGKPAHPHQCGSKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSSRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRSHPCEHPPQHNCHSAAACPPCMMFTTKFCHGNHEQRKTIPCSQPNFSCGLACGKPLQCGGHKCIKPCHEGACQSAGEICRQSCTKPRSNCGHKCASVCHEGACPETPCKELVEVQCECGHRKQNRSCQELAREHSRIATIQLASSMAEMSRGNYMELSEILAPAKKSNRTLDCNDECRLLERNRRLAVALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLTDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKDRCWFPATSIMEVLARESGQRRVPVPSNNAWGLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00597038;
90% Identity: iTF_00505792;
80% Identity: -