Basic Information

Insect: Drosophila sechellia
Gene Symbol: bab1
Assembly: GCA_004382195.1
Location: NC:1098669-1155568[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.6e-17 3.2e-14 52.0 0.0 1 43 568 611 568 613 0.95

2 2 6.5 1.3e+04 -4.4 0.4 6 12 724 730 716 731 0.63

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.6e-17	3.2e-14	52.0	0.0	1	43	568	611	568	613	0.95
2	2	6.5	1.3e+04	-4.4	0.4	6	12	724	730	716	731	0.63

Sequence Information

Coding Sequence: ATGGCGTCGGCGCAGGCGGAGACGAATGTCGGTGtggcgcccgaacagggacCAGTGGCCCAGAGGCAGCGCAAGGGGACGGGATCGGGCGCCGATTCGCCCAAGAGTAACAGGAGCTCGCCCACTGAGCAGGAGGAGAAGCGTATCAAAAGCGAGGATCGCACTTCACCCACTGGCGGAGCCAAGGACGAGGAAAAGGAGAGTCAAGGTCATGCTGGAGCCGGAGGGGGAGGATCTTCGCCAGTGAGTTCGCCACAGGGCAGGAGTTCTTCGGTGGCCTCGCCCAGTTCCAGCTCCCAGCAATTCTGCCTGCGCTGGAACAACTACCAGACGAACCTGACCACCATCTTCGACCAGCTGCTCCAGAACGAGTGCTTCGTGGACGTGACCTTGGCCTGCGATGGTCGCTCTATGAAGGCCCACAAGATGGTCCTGTCCGCCTGCTCGCCCTACTTCCAAACGCTTCTGGCCGAGACGCCCTGCCAGCATCCCATTGTGATCATGCGGGACGTAAACTGGTCGGATCTCAAGGCCATTGTGGAGTTCATGTACCGCGGCGAGATCAACGTGAGCCAGGACCAGATAGGTCCTCTGCTCAGAATAGCTGAGATGTTGAAAGTGCGCGGTCTGGCGGATGTGACCCACATGGAGGCGGCCACGGCAGCAGCGGCTGCCGCTTCGTCGGAGAGGATGCCCTCCTCGCCCAAGGAGAGTACTTCAACTTCCAGAACTGAACATGACAGGGAACGGGAGGCCGAGGAGCTACTGGCCTTCATGCAGCCCGAGAAGAAGCTACGCACTTCGGACTGGGATCCCGCTGAGCTGAGGCTTTCCCCACTGGAGCGGCAGCAGGGCAGGAATGTGAGAAAGCGCCGGTGGCCCTCGGCGGACACAATATTCAATCCACCCGCACCACCCAGTCCACTGAGCAGCCTGATAGCCGCCGAAAGGATGGAGCTGGAGCAAAAGGAAAGAGAGAGACAGAGGGACTGTTCGCTGATGACACCTCCACCCAAACCACCACTGAGCAGTGGCTCCGCAGCGGGAGCCACGAGGCGCTTGGAGACCGCTATCCATGCTCTGGACATGCCATCGCCGGCTGCCACGCCAGGACCTCTCTCCCGATCCTCGAGACCACACTCGCAGAgcccccagcagcagcaggcacaGCAGCAGGGTCAGCTTCCTTTGCCCCTGCCCCTGCATCCGCACCACCACGCATCACCCGCCCCACATCCCTCCCAGACCGCCGGATCAGCCCACCACCCGCCATCGCCCGCTGGAGACTCCCGTTTTTCCCTCGGACCCGCAGCCGCCATGGCCGCTGCCATGGAACTGAGTGGCCTGGGACCTGGTCCCTCCGCCGAGCCACGCCTACCGCCTCCACCGCCGCACCACCATGGCGGTGgtggagtgggcggtgggGGAGTTGGAGGAGGTGCAGGCGGAGTGGGTTCAGGCGGGGGATCCTCGCTCGCCGATGACTTGGAGATCAAGCCAGGGATCGCCGAGATGATCCGAGAGGAAGAAAGGGCCAAAATGATGGAGAACTCGCACGCCTGGATGGGCGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGAGGTCCTCTCAAGTCCTGGCGTCCGGAGACCATGGCGGAGGCCATTTTCAGTGTGCTGAAGGAGGGCCTTTCGCTCTCCCAGGCCGCCCGCAAGTACGACATCCCGTATCCCACGTTCGTGCTCTATGCCAACAGGGTGCACAATATGCTGGGACCTTCCATTGACGGCGGGCCCGATCTGCGGCccaaggggcgtggcaggccgCAGCGAATCCTTCTGGGCATCTGGCCCGACGAGCACATCAAGGGCGTCATCAAGACGGTGGTCTTTCGCGACACCAAGGACATCAAGGACGAGAGCCTAGCCGCCCACATGCCACCCTACGGTCGACATTCGCCCGCGTTTCCCTTGCAGGACCTCCCTCTCAGCTATCCCGGAGCCAGTGGCGCCTTGGCAGGCGCGCCCAGCTCCTTGGCCTGTCCGAATGGCAGTGGACCGCAGAccggagtgggcgtggccggagAGCAGCACATGTCGCAGGAAACGGCCGCCGCGGTGGCCGCCGTGGCGCACAACATCCGCCAGCAGATGCAAATGGCAGCGGTTCCGCCCGGCTTATTCAATCTGCCGCCTCATCCGGGAGTGGGCGGTGGAGTGGGCAGCGTTCCCGGCGCAGCTGGAGGCAGGGCCAGCATATCGCCGGCCCTGAGCAGTGGCTCCGGGCCCAGGCACGCTCCCTCGCCCTGCGGGCCCGCCGGCCTCCTGCCGCCCAGCATGGCCGTCGCTctgcaccaccagcagcaacagcaggcggCGCACCACCACATGCAGCAGCTCcacctgcagcagcaacaggccCACTTGCaccaccatcagcagcagcagcagcaccatcagGGCGGCCATCAGGTGGCCCACAAGTCCGGTTTCGGTGCCAGCTCCAGTTCCTCAGCCTCCTCGTCGTCAATGGGCCAGCACCATGCGCCCAAGGCCAAGAGCAGTCCGTTGCGCAGCGAAACGCCTCGGCTGCACTCCCCGCTCGGCGATCTTGGCCTGGACATGGCCAGCTACAAGCGCGAGTTCTCGCCCAGCCGCCTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGCGCCAGTGTCTCCTCTTCCTCATCTtcggcggcggcagcgacgGCTCCTCCAGAAAGAGCGGCGGGAGCAGCTTCCGCAGCCGCAGGCGCAGATGCATCCAGTTCCTCGAGCAGTGGAGGCATCAAGGTGGAACCCATCACCACCACTAGCGAGTAA
Protein Sequence: MASAQAETNVGVAPEQGPVAQRQRKGTGSGADSPKSNRSSPTEQEEKRIKSEDRTSPTGGAKDEEKESQGHAGAGGGGSSPVSSPQGRSSSVASPSSSSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPLSSGSAAGATRRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQAQQQGQLPLPLPLHPHHHASPAPHPSQTAGSAHHPPSPAGDSRFSLGPAAAMAAAMELSGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGGGAGGVGSGGGSSLADDLEIKPGIAEMIREEERAKMMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGAPSSLACPNGSGPQTGVGVAGEQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLFNLPPHPGVGGGVGSVPGAAGGRASISPALSSGSGPRHAPSPCGPAGLLPPSMAVALHHQQQQQAAHHHMQQLHLQQQQAHLHHHQQQQQHHQGGHQVAHKSGFGASSSSSASSSSMGQHHAPKAKSSPLRSETPRLHSPLGDLGLDMASYKREFSPSRLFAEDLAELVGASVSSSSSSAAAATAPPERAAGAASAAAGADASSSSSSGGIKVEPITTTSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00505328;
90% Identity: iTF_00592460; iTF_00602507; iTF_00602666; iTF_00505328; iTF_00505475; iTF_00619216; iTF_00619077; iTF_00591765; iTF_00591624; iTF_00539584; iTF_00539727;
80% Identity: iTF_00592460;