Basic Information

Insect: Drosophila santomea
Gene Symbol: bab1
Assembly: GCA_016746245.1
Location: NC:1058207-1116384[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-17 3.2e-14 52.0 0.0 1 43 568 611 568 613 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-17	3.2e-14	52.0	0.0	1	43	568	611	568	613	0.95

Sequence Information

Coding Sequence: ATGGCGTCGACGCAGGCGGAAACGAGTGTCGGcttggcgcccgaacagggaccaGTGGCTCAGAGGCAGCGCAAAGGTCCGGGATCGGGCGGTGGTTCGCCCAAAAGCAACAGGAGCTCGCCCACTCAGCAGGAGGAGAAGCGTACGAAGAGCGAGGATCGCACCTCTCCCACTGGCGGAGCCAAGGACGAAGACAAGGAGAGTCAAGGTCATGCTGGAGCCGGAGGGGCAGGATCTTCGCCCGTGAGTTCGCCACAGGGCATGAGCTCGTCGGTGGCCTCGCCCAGTTCCACCTCCCAGCAGTTCTGCCTGCGCTGGAACAACTATCAGACGAACCTGACCACCATCTTCGACCAGCTGCTCCAGAACGAGTGCTTCGTGGACGTGACCTTGGCCTGCGATGGTCGCTCCATGAAGGCGCACAAGATGGTCCTGTCCGCCTGCTCGCCCTACTTCCAAACGCTTCTGGCCGAAACGCCCTGCCAGCATCCCATTGTTATCATGAGGGACGTGAGCTGGTCAGATCTCAAGGCCATTGTGGAGTTCATGTACCGCGGCGAGATCAACGTGAGCCAGGACCAGATAGGTCCTCTGCTCCGGATAGCTGAGATGCTGAAAGTGCGCGGTCTGGCGGATGTGACCCACATGGAGGCGGCCACGGCAGCCGCGGCTGCCGCTTCCTCGGAGCGAATGCCCTCCTCCCCCAAGGAGAGTACGTCCACTTCCAGAACTGAGCAAGAGCGGGAACGGGAGGCCGAGGAGCTACTGGCCTTCATGCAGCCCGAGAAGAAGCTACGCACTTCGGACTGGGATCCCGCCGAGCTGAGGCTTTCCCCACTAGAGCGCCAGCAGGGCAGAAATGTGAGAAAGCGCCGCTGGCCCTCGGCGGACACCATATTCAATCCACCCGCACCACCCAGTCCACTGAGCAGCCTGATAGCCGCCGAAAggatggagctggagcaaaaagaaagagagagacagagGGACTGTTCGCTGATGACACCACCACCCAAGCCACCACTGAGCACTGGCTCCGCTGTGGGAGCCTCGAGGCGCTTGGAGACCGCCATCCACGCCCTGGACATGCCTTCGCCGGCAGCCACGCCAGGACCCCTCTCCCGATCCTCGAGACCCCACTCGCAGAgtccccagcagcagcagacacAGCAGCAGAGTCAGCTCCCTTTGCCGCTGCCCCTTCATCCGCACCACCACTCATCGCCCGCCCCACATCCCTCCCAGACCGCCGGATCAGCCCACCATCCGCCATCGCCGGCTGGAGACTCCCGCTTTCCCCTCGGACCCGCTGCCGCCATGGCCGCTGCCATGGAACTCAGTGGCCTCGGTCCCGGTCCGCCCGCTGAGCCACGCCTtcctcctccaccgccgcaccaccatggtggtggtggagtgGGTGGCGGGGGAGTAGGCGGCGCAGGTGCAGGCGGAGTGGGTTCAGGCGGCGGATCCTCGCTCGCCGATGACATGGAGATCAAGCCAGGGATCGCGGAAATGATCCGAGAGGAAGAAAGGGCCAAAATGATGGAGAACTCGCACGCCTGGATGGGCGCCACCGGATCGACGCTGGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGGGAGCGAGGCCCGCTGAAGTCCTGGCGACCCGAGACCATGGCGGAGGCCATTTTCAGTGTGCTGAAGGAGGGCCTCTCCCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTATCCCACATTCGTGCTCTATGCCAACCGGGTGCACAATATGCTGGGGCCCTCCATCGACGGCGGCCCGGACTTGCGGCccaaggggcgtggcaggccGCAGAGAATCCTTCTGGGCATCTGGCCCGATGAGCACATTAAGGGCGTCATCAAGACGGTGGTCTTTCGAGACACCAAGGACATCAAGGACGAAAGCCTGGCCGCCCACATGCCACCCTACGGTCGACATTCGCCCGCGTTTCCCTTGCAGGACCTCCCTCTCAGCTATCCCGGAGCAAGTGGCGCCTTGGCAGGGACGCCCAGCTCCATGGCCTGTCCCAATGGCAGTGGACCGCAGACCGGAGTTGGCGTAGCCGGAGACCAGCACATGTCGCAGGAAACGGCCGCCGCGGTGGCCGCCGTGGCGCACAACATCCGCCAGCAGATGCAAATGGCAGCGGTTCCGCCCGGCTTATTCAATCTGCCGCCGCATCCGGGAGTGGGCGGTGGAGTGGGCAGCGTGCCCGGCGCAGGGGGAGGCAGGGCCAGCATATCGCCGGCAGTGAGCAGTGGCTCCGGGCCCAGGCACGCGCCCTCGCCCTGTGGACCAGCGGGGCTCCTGCCGAATCTGCCGCCCAGCATGGCCGCCGCTctgcaccaccagcaacagcaacaggctGCGCACCACCAcatgcagcagctgcacctgcaacagcaacaggccCACTtgcaccaccatcagcagcagcagcagcagcagcaccatcagGGCGGCCATCAGGTGGGCCACAAGTCCGGTTTCGGTGCCAGCTCCAGTTCCTCAGCCTCCTCCTCAATGGGCCAGCACCATCCGCCCAAGGCCAAGAGCAGCCCCTTGCGCAGCGAAACACCTCGGCTGCACTCCCCTCTCGGCGATCTGGGCCTGGACATGGCCAGCTACAAGCGCGAGTTCTCGCCCAGCCGCCTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGGGCCAGTGTTTCCTCTTCCTCATCCTCGGCGGCCGCAGCATCGGCTCCTCCAGAAAGATCGGCGGGAGCAGCTTCCGCAGCCGCAGGCGCTGATGCACCCAGTTCCTCGAGCAGTGGCGGCATCAAAGTGGAGCCCATCACCACCACTAGCGAGTGA
Protein Sequence: MASTQAETSVGLAPEQGPVAQRQRKGPGSGGGSPKSNRSSPTQQEEKRTKSEDRTSPTGGAKDEDKESQGHAGAGGAGSSPVSSPQGMSSSVASPSSTSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVSWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTSTSRTEQEREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPLSTGSAVGASRRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQTQQQSQLPLPLPLHPHHHSSPAPHPSQTAGSAHHPPSPAGDSRFPLGPAAAMAAAMELSGLGPGPPAEPRLPPPPPHHHGGGGVGGGGVGGAGAGGVGSGGGSSLADDMEIKPGIAEMIREEERAKMMENSHAWMGATGSTLADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGTPSSMACPNGSGPQTGVGVAGDQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLFNLPPHPGVGGGVGSVPGAGGGRASISPAVSSGSGPRHAPSPCGPAGLLPNLPPSMAAALHHQQQQQAAHHHMQQLHLQQQQAHLHHHQQQQQQQHHQGGHQVGHKSGFGASSSSSASSSMGQHHPPKAKSSPLRSETPRLHSPLGDLGLDMASYKREFSPSRLFAEDLAELVGASVSSSSSSAAAASAPPERSAGAASAAAGADAPSSSSSGGIKVEPITTTSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00505328;
90% Identity: iTF_00592317;
80% Identity: iTF_00591765;