Basic Information

Insect: Drosophila yakuba
Gene Symbol: bab1
Assembly: GCA_016746365.1
Location: NC:1065118-1124571[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4e-17 5.6e-14 52.0 0.0 1 43 569 612 569 614 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4e-17	5.6e-14	52.0	0.0	1	43	569	612	569	614	0.95

Sequence Information

Coding Sequence: ATGGCGTCGACGCAGGCGGAAACGAGTGTCGGCttggcgcccgaacagggaccaGTGGCTCAGAGGCAGCGCAAAGGACCGGGATCGGGCGGTGGTTCGCCCAAAAGCAACAGGAGCTCGCCCACTCAGCAGGAGGAGAAGCGTGCGAAGGGCGAGGATCGCACCTCACCCACTGGCGGAGCCAAGGACGAGGACAAGGAGAGTCAAGGTCATGCTGGAGCCGGAGGGGCAGGTTCTTCGCCCGTGAGTTCGCCACAGGGCAGGAGCTCGTCGGTGGCCTCGCCCAGTTCCACCTCCCAGCAGTTCTGCCTGCGCTGGAACAACTATCAGACGAACCTGACCACCATCTTCGACCAGCTGCTCCAGAACGAGTGCTTCGTGGACGTGACCTTGGCCTGCGATGGTCGCTCCATGAAGGCGCACAAGATGGTCCTGTCCGCCTGTTCGCCCTACTTCCAAACGCTTCTGGCCGAGACGCCCTGCCAGCATCCCATTGTGATCATGAGGGATGTGAGCTGGTCAGATCTCAAGGCCATTGTGGAGTTCATGTACCGCGGCGAGATCAACGTGAGCCAGGACCAGATAGGTCCACTGCTCCGGATAGCTGAGATGCTGAAAGTGCGCGGTCTGGCGGATGTGACCCACATGGAGGCGGCCACGGCAGCCGCGGCTGCCGCTTCCTCGGAGCGAATGCCCTCCTCCCCCAAGGAGAGTACGTCCACTTCCAGAACTGAGCAAGAGCGGGAACGGGAGGCCGAGGAACTACTGGCCTTCATGCAGCCCGAGAAGAAGCTACGCACTTCGGACTGGGATCCCGCCGAGCTGAGGCTTTCCCCACTGGAGCGCCAGCAGGGCAGGAATGTGAGAAAGCGCCGCTGGCCCTCGGCGGACACCATATTCAATCCACCCGCACCACCCAGTCCACTGAGCAGCCTGATAGCCGCCGAACggatggagctggagcaaaAGGAAAGAGAGAGACAGAGGGACTGTTCGCTGATGACACCACCACCCAAGCCACCACTGAGCACTGGCTCCGCTGTGGGAGCCTCGAGGCGCTTGGAGACCGCCATCCACGCCCTGGACATGCCCTCGCCGGCAGCCACGCCGGGACCCCTCTCCCGATCCTCGAGACCCCACTCGCAGAgtccccagcagcagcagacacAGCAGCAGAGTCAGCTTCCCTTGCCGCTGCCCCTGCATCCGCACCACCACGCATCGCCCGCCCCACATCCCTCCCAGACCGCCGGATCAGCCCACCATCCGCCATCGCCGGCTGGAGACTCCCGCTTTCCCCTCGGACCCGCTGCCGCCATGGCCGCTGCCATGGAACTCAGTGGCCTCGGTCCCGGTCCGCCCGCTGAGCCACGCCTacctcctccaccaccgcaccaccacGGCGGAGGTGGAGTGGGTGGCGGGGGAGTAGGCGGCGCAGGTGCAGGCGGAGTAGGTGCAGGCGGGGGATCCTCGCTCGCCGATGACATGGAGATCAAGCCAGGGATCGCGGAAATGATCCGAGAGGAAGAAAGGGCCAAAATGATGGAGAACTCGCACGCCTGGATGGGCGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCATCACATGCGCTTCCGGGAGCGAGGCCCGCTGAAGTCCTGGCGACCCGAGACCATGGCGGAGGCCATTTTCAGTGTGCTGAAGGAGGGCCTCTCCCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTATCCCACATTCGTGCTCTATGCCAACCGGGTGCACAATATGCTGGGGCCCTCCATCGACGGCGGACCGGACTTGCGGCccaaggggcgtggcaggccGCAGAGAATCCTTCTGGGCATCTGGCCCGATGAGCACATTAAGGGCGTCATCAAGACGGTGGTCTTTCGCGACACCAAGGACATCAAGGACGAAAGCCTGGCCGCCCACATGCCACCCTACGGTCGACATTCGCCCGCGTTTCCCTTGCAGGACCTCCCTCTCAGCTATCCCGGAGCAAGTGGCGGCTTGGCAGGGACGCCCAGCTCCATGGCCTGTCCCAATGGCAGTGGACCGCAGACCGGAGTTGGCGTAGCCGGAGACCAGCACATGTCGCAGGAAACGGCCGCCGCGGTGGCCGCCGTGGCGCACAACATCCGCCAGCAGATGCAAATGGCAGCGGTTCCGCCCGGCTTATTCAATCTGCCGCCGCATCCGGGAGTGGGCGGTGGAGTGGGCAGCGTGCCCGGCGCAGGTGGAGGCAGGGCCAGCATATCGCCGGCACTGAGCAGTGGCTCCGGGCCCAGGCACGCGCCCTCGCCCTGTGGACCAGCGGGGCTCCTGCCGAATCTGCCGCCCAGCATGGCCGCCGCTctgcaccaccagcaacagcaacaggctGCGCACCACCAcatgcagcagctgcacctgcaacagcaacaggcaCACTTgcaccaccatcagcagcagcagcagcagcaccatcagGGCGGCCATCAGGTGGGCCACAAGCCCGGTTTCGGTGCCAGCTCCAGTTCCTCAGCCTCCTCCTCAATGGGCCAGCACCATCCGCCCAAGGCCAAGAGCAGCCCCTTGCGCAGCGAAACACCTCGGCTGCACTCACCTCTCGGCGATCTGGGCCTGGACATGGCCAGCTACAAGCGCGAGTTCTCGCCCAGCCGCCTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGGGCCAGTGTCTCATCTTCCTCATCCTCGGCGGCCGCAGCATCGGCTCCTCCAGAAAGATCGGCGGGAGCAGCTTCCGCAGCCGCAGGCGCTGATGCACCCAGTTCCTCGAGCAGTGGCGGCATCAAAGTGGAGCCCATCACCACCACTAGCGAGTGA
Protein Sequence: MASTQAETSVGLAPEQGPVAQRQRKGPGSGGGSPKSNRSSPTQQEEKRAKGEDRTSPTGGAKDEDKESQGHAGAGGAGSSPVSSPQGRSSSVASPSSTSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVSWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSERMPSSPKESTSTSRTEQEREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPLSTGSAVGASRRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQTQQQSQLPLPLPLHPHHHASPAPHPSQTAGSAHHPPSPAGDSRFPLGPAAAMAAAMELSGLGPGPPAEPRLPPPPPHHHGGGGVGGGGVGGAGAGGVGAGGGSSLADDMEIKPGIAEMIREEERAKMMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDESLAAHMPPYGRHSPAFPLQDLPLSYPGASGGLAGTPSSMACPNGSGPQTGVGVAGDQHMSQETAAAVAAVAHNIRQQMQMAAVPPGLFNLPPHPGVGGGVGSVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAAALHHQQQQQAAHHHMQQLHLQQQQAHLHHHQQQQQQHHQGGHQVGHKPGFGASSSSSASSSMGQHHPPKAKSSPLRSETPRLHSPLGDLGLDMASYKREFSPSRLFAEDLAELVGASVSSSSSSAAAASAPPERSAGAASAAAGADAPSSSSSGGIKVEPITTTSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00505328;
90% Identity: iTF_00592317;
80% Identity: iTF_00619216;