Dsup011744.1
Basic Information
- Insect
- Drosophila subpulchrella
- Gene Symbol
- bab1
- Assembly
- GCA_014743375.2
- Location
- NC:15098056-15166117[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-17 3.6e-14 51.9 0.0 1 43 574 617 574 619 0.95 2 2 7.3 1.2e+04 -4.2 0.3 6 12 731 737 722 738 0.60
Sequence Information
- Coding Sequence
- ATGGCGTCGGCGCAGGCGGAAACGAAGGTTGGaatggcgcccgaacagggagcAGTGACGCAGAGGCAGCGCAAGGGCTCGGGATCGGGAGCGGGTTCGCCGAAGAGCAGCCGCAGTTCGCCCAGCCAGCAGGAGGAGAAGCCGAGCAGGAAGAGCGAGGATCGCACCTCACCCACGGGCGGTGGGTCAAAGGACGAGGACAAGGAGGGTCAAGGTCACGCggccggaggaggaggaggaggaggctcCTCGCCGGTGAGTTCGCCCCAAGGACGCAGCTCCTCGGTGGCCTCGCCCAGTTCCACGTCCCAGCAGTTCTGCCTGCGATGGAACAACTACCAGACGAATCTCACGACCATCTTCGATCAGCTGCTCCAGAACGAGTGCTTCGTGGACGTGACCTTGGCCTGCGACGGTCGCTCCATGAAGGCCCACAAGATGGTCCTCTCGGCCTGTTCGCCCTACTTCCAAACCCTGCTGGCCGAGACACCCTGCCAGCATCCCATTGTGATCATGCGGGATGTGAACTGGTCGGATCTGAAGGCCATTGTGGAGTTTATGTACCGCGGCGAGATCAATGTGAGCCAGGATCAGATTGGCCCGCTGCTCAGGATAGCCGAGATGCTGAAAGTGCGCGGCCTGGCGGATGTGACCCACATGGAGGCGGCCacggcagcggcggcggcggcctCCTCCTCCGAACGGATGCCCTCCTCCTCCCCCAAAGAGGGGGGCACTTCCACGTCCAGGACTGATAATGAGCGCGAACGCGAGGCGGAGGAGCTTCTGGCCTTTATGCAGCCCGAGAAGAAGCTGCGCACGGACTGGGATCCCGCTGAGCTGAGACTCTCGCCGCTGGAGCGCCAGCAGGGCAGGAACGTTAGGAAGCGGCGGTGGCCCTCGGCGGACACGATCTTCAATCCACCTGCACCACCCAGTCCGCTGAGCAGCCTGATAGCCGCCGAGCGAATGGAGCTGGAACAGAAGGAGAGGGAGCGGCAGCGGGACTGTTCGCTGATGACTCCGCCACCCAAGCCACCACTGAGCAGTGGTTCGGGGGCGGGGGGAGCCTCGAGACGCCTGGAGACCGCCATCCATGCCCTGGACATGCCCTCGCCGGCCGCCACGCCCGGACCCCTCTCCCGATCCTCGCGACCCCACTCGCAGAgtccccagcagcagcagcagcagggccAGCTTCCCCTCTCGCTGCCCCTACACACACACCACCATGCACCACCCGCCCCACATCCCGCCCAGACCTCGGGATCCACCCACCATCCGCATCCGCCATCGCCCGCTGGAGACTCCCGCTTTCCCCTGGGTCCAGCCGCTGCCATGGCCGCCGCCATGGAACTGAGTGGTTTGGGACCTGGACCGCCTGCCGAGCCACGCCTACCGCCTCCACCGCCGCACCACCACGGCGCCGGAGTGGGCGGAGGAGGCGTGGGCGGCGGTGCAGGCGGAGTGGGCTCGAGCGGAGGATCGTCGCTGGCCGATGACATGGAGATCAAGCCCGGTATCGCCGAGATGATCCGAGAGGAAGAAAGGGCCAAAATGATGGAGAACTCGCACGCCTGGATGGGGGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAATGCTGGAACACCAACCAGAATCTGATGCACCACATGCGCTTCCGCGAGCGGGGTCCGCTGAAGTCCTGGCGACCCGAGACCATGGCCGAGGCCATCTTCAGTGTGCTGAAGGAGGGCCTTTCGCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTACCCCACCTTCGTGCTCTACGCCAACCGGGTGCACAACATGCTGGGACCCTCCATCGACGGCGGGCCGGACCTGCGGCCCAAGGGGCGCGGCAGACCGCAGAGGATCCTCCTGGGCATCTGGCCCGACGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTCCGCGACACCAAGGACATCAAGGACGACAGCCTGGCGTCTCACATGCCGCCCTACGGTCGGCATTCGCCCGCGTTTCCCTTGCAGGACATGCCCCTGAGCTACCCCGGCGCAAGTGGCGCCCTGGCAGGAGCGCCCAGCTCGCTGGCCTGTCCGAACGGCAGCGGTCCGCAGGCCGGGGTGGGCGGAGTGGCTGGTGAGCAGCACATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCAGTGGCCCACAACATCCGACAGCAGATGCAAATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGACCACCGCCCGTTCCGCCCGGCTTGTTCAACCTGCCGCCCCATCCAGGAGTGGGTGGCGGCGTGGGCGTGGGGGTGCCAGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCCTGAGCAGCGGCTCGGGGCCCAGGCATGCACCCTCGCCATGCGGTCCCGCCGGCCTCCTGCCGAATCTGCCGCCCAGCATGGCCGTTGCCctgcaccaccagcagcagcagcaggcggcgcaccaccagcaacaacagcaggcGGCGCACCACCACCTGCAACAGCTCCacctgcagcagcaacaggccCACTtgcaccaccaccagcagcagcaacagcagcagcagcaccatcaGGGCGGCCACCAGGTGTCCCACAAGTCCGGTTTCGGCGCCAGCTCCAGTTCCTcggcctcctcctcctcgctgGGCCAGCTCCATCCCAATCCCAAGGCCAAGGGCAGTCCCCTGCGCAGCGAGACTCCGCGTCTTCACTCCCCGCTCGGCGATCTGGGCCTGGACATGGCCGGCTACAAGCGGGAGTTCTCGCCCAGCCGCCTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGCGCCAGCgtgtcctcctcctcctcctcagCGGCAGCGGGCGCAGCGCCTCCGGAGAGATCGGCCGGAGGATCTTCAGCAGCCGCGACCACGGATGCGGCCGCTTCCTCGAGCAGTGGAGGCATCAAAGTGGAGCCCATCACCACCACTAGCGAGTAA
- Protein Sequence
- MASAQAETKVGMAPEQGAVTQRQRKGSGSGAGSPKSSRSSPSQQEEKPSRKSEDRTSPTGGGSKDEDKEGQGHAAGGGGGGGSSPVSSPQGRSSSVASPSSTSQQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQHPIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVTHMEAATAAAAAASSSERMPSSSPKEGGTSTSRTDNEREREAEELLAFMQPEKKLRTDWDPAELRLSPLERQQGRNVRKRRWPSADTIFNPPAPPSPLSSLIAAERMELEQKERERQRDCSLMTPPPKPPLSSGSGAGGASRRLETAIHALDMPSPAATPGPLSRSSRPHSQSPQQQQQQGQLPLSLPLHTHHHAPPAPHPAQTSGSTHHPHPPSPAGDSRFPLGPAAAMAAAMELSGLGPGPPAEPRLPPPPPHHHGAGVGGGGVGGGAGGVGSSGGSSLADDMEIKPGIAEMIREEERAKMMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLASHMPPYGRHSPAFPLQDMPLSYPGASGALAGAPSSLACPNGSGPQAGVGGVAGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGGGVGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAHHQQQQQAAHHHLQQLHLQQQQAHLHHHQQQQQQQQHHQGGHQVSHKSGFGASSSSSASSSSLGQLHPNPKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAGAAPPERSAGGSSAAATTDAAASSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00505328;
- 90% Identity
- iTF_00592317;
- 80% Identity
- iTF_00602666;