Basic Information

Insect: Drosophila rellima
Gene Symbol: stc
Assembly: GCA_035043635.1
Location: JAWNMV010000890.1:14120788-14124337[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5 1.4e+04 -3.7 0.5 15 18 389 392 388 393 0.79

2 16 2 1.8e+04 -4.1 1.6 15 19 416 420 415 420 0.81

3 16 0.058 5.3e+02 0.8 2.0 4 11 449 456 448 457 0.90

4 16 6e-07 0.0055 16.7 15.1 1 19 461 478 461 478 0.93

5 16 2 1.8e+04 -4.2 1.4 6 10 504 508 503 508 0.87

6 16 6.8e-08 0.00063 19.7 13.8 1 18 514 531 514 532 0.98

7 16 1.7 1.6e+04 -3.9 1.5 7 13 536 542 536 543 0.75

8 16 2.1e-09 1.9e-05 24.6 12.9 1 19 572 590 572 590 0.98

9 16 1.2 1.1e+04 -3.3 0.5 5 10 620 625 620 625 0.90

10 16 3.7e-05 0.34 11.0 16.5 4 19 638 653 631 653 0.86

11 16 0.073 6.7e+02 0.5 11.9 1 11 693 703 693 715 0.79

12 16 2.9e-10 2.7e-06 27.3 15.1 1 18 720 737 720 738 0.97

13 16 2 1.8e+04 -4.4 1.2 6 10 767 771 767 771 0.88

14 16 2 1.8e+04 -7.8 9.9 10 18 785 794 774 795 0.76

15 16 2.4e-08 0.00022 21.2 12.4 1 16 831 846 831 856 0.94

16 16 2.2e-05 0.2 11.7 13.3 1 19 863 882 863 882 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5	1.4e+04	-3.7	0.5	15	18	389	392	388	393	0.79
2	16	2	1.8e+04	-4.1	1.6	15	19	416	420	415	420	0.81
3	16	0.058	5.3e+02	0.8	2.0	4	11	449	456	448	457	0.90
4	16	6e-07	0.0055	16.7	15.1	1	19	461	478	461	478	0.93
5	16	2	1.8e+04	-4.2	1.4	6	10	504	508	503	508	0.87
6	16	6.8e-08	0.00063	19.7	13.8	1	18	514	531	514	532	0.98
7	16	1.7	1.6e+04	-3.9	1.5	7	13	536	542	536	543	0.75
8	16	2.1e-09	1.9e-05	24.6	12.9	1	19	572	590	572	590	0.98
9	16	1.2	1.1e+04	-3.3	0.5	5	10	620	625	620	625	0.90
10	16	3.7e-05	0.34	11.0	16.5	4	19	638	653	631	653	0.86
11	16	0.073	6.7e+02	0.5	11.9	1	11	693	703	693	715	0.79
12	16	2.9e-10	2.7e-06	27.3	15.1	1	18	720	737	720	738	0.97
13	16	2	1.8e+04	-4.4	1.2	6	10	767	771	767	771	0.88
14	16	2	1.8e+04	-7.8	9.9	10	18	785	794	774	795	0.76
15	16	2.4e-08	0.00022	21.2	12.4	1	16	831	846	831	856	0.94
16	16	2.2e-05	0.2	11.7	13.3	1	19	863	882	863	882	0.96

Sequence Information

Coding Sequence: ATGGCAGAGTATtggcagcaggagcagcagcaaatgaatGGATCTGGAGGCGCTTCAGCAGCTCGGGATGAGTCAGCTTCTGCCTTCAATGGCGGCagcgctgcttctgcttctacCGCAGTCGAGGCAACTGCCGCAGCCGCAGgtagcggcaacaacaataacaactatgTGAACTTTAATCAGTTTATCACGCAACATAATCTGGCCAGCTCCAATGTGACTGCCTGCAACAACATTGGTAGTGGCGGTGGTGCCTTTGGATTGTtgcccaacagcaacagctcctCCAACTCCGCCTCTACCtccggcaacaacagcaacagttttgGCGGACCATATTTGGGTTATCTAAATGGTGATGGAGGAGCGAGCGGAGGCGACGCTACCATTAACAATTATGCAGCATCAAATGCTTATCCCGTTATGTACTCCCCATTTGGCAATAATCCCTTTGCCTCCGGGAGCAACTTTGATTTCAGCACATCCAAGCTGCAGGCGTCGGCACCTGAATTTGTGCCCAACTTTGCCAAGCTCAGTCTCAGTGCAGCTGCAGGTCAAGAGGCGACATCGtccagcaatagcaacagtagaaacaacaacagtaacaacaacaatagcactGCCAGAGAATCCAACAGTGAAATAGTCAACGAGGCATTAACAAAcaatcatcaacatcatcatcatcaacagcaacaacagcagcatcaacatcagcaacagcatcaaagGCTGCCAAAACCTCATGGCTCAAACAGTCGACAGCAGCGACGCAATGATTATCGAGAGGATCGAATTGAACGCAACGAGGATCGCTATGATCGCAAGAAGCCGCAGAAGCAGCAGCGCTACGATAATCATCGCAGCAATAAACGAAGAGACGATTGGAATCGCAATCGGGATCGCATCAATGGTTATCCACGTGCCACTGAGGAACTggacaccagcaacagcaacgatagCGCACATCCCTCGCCggagaagcaacagcaaccacaacaacatcaacatcagcatcagcagcaacaaatctCGCCGAGACGAGCTCCAGATAATGAGAAGTTGTCGCAGCGTGAGAAGCTGATGCGCGACATTGAGCAGCGTCGTCTGGAATGTCTGGTGTGTGTGGAACAGATCAAGGCTCATCATGGCACTTGGTCGTGCCAGAACTGTTACCATGTGCTGCATCTCAAGTGCACCATCACGTGGGCGAGCAGCTCAAAGTCTGCCGAGGGCTGGAGATGCCCTGCCTGCCAGAATGTGCTGGAGGAGCTGCCACGCGAGTATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCATTGACGCGCACCGAGTTAGCGCACAGCTGTGGCGAGCTCTGTTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACCTTGCTCTGCCATCCGGGGCCATGTCCGCCGTGCCAGGCGAATGTGAGTCGCAGCTGCGGCTGTGGACGCACCAATAAACTGATGCAGTGCGCCATGAAGCAGCCGCTGCAATGTGAGGCCACTTGCGACAAGCTGCTGAACTGCAGCGAGCATCGTTGCCAGCAGATCTGTCATGCCGGCAAGTGTGAGCCGTGCGGCGAGCAGGTGCAGCAGAACTGCCACTGTGGCAAGCAACAGCGGGAGGTGCAGTGCACCCGGGAGAGTCAGGACAAGCGCAACTATTCGTGCAAGGAGTGCTGTGGCAAACCGTTGCCCTGTGGCAATCACAAGTGCAAAGATTCCTGCCACGCCGGCGCCTGTCGTCCCTGCAAGTTGAGTCCCTCGCAAATTACTAGCTGTCCGTGTGGAAAGCTGCCCGTTCCGTCGGAGCAGCGCAGCAGTTGCCTTGATCCGGTGCCCACGTGCGAGGGCGTTTGTGGCAAGACCCTGCGCTGTGGCAAGCCGGCTCATCCGCATCAATGCACCAGCAAGTGCCACTTGGGCCAATGTCCGCCCTGTACAAAGCAGACGGCTGTCAAGTGTCGCTGTGGCCACATGGACCAGATGATCAAGTGTCGGCAGCTGTCGACACGAGCGGACGACGCTCGCTGCAAGCGACGGTGCACCAAGAAGCGCAGCTGCGGCAAGCATAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGTTGCCCTGCAACCGGACGCTGAGCTGCGGACGCCACAAATGCGATCAGCCGTGTCATCGTGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGTGCAGAGGTCATCTATCCACCTGTGCCCTGTGGCACCAAGAAGCCCATCTGTAAGCGCCCCTGTTCACGCACCCACGGCTGCGAGCATCCGCCGCAGCACAACTGCCATGCGGCGGCCACGTGCCCGCCCTGCATGATGTTCACCACCAAATGGTGTCACGGCAACCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGCCAACTTTAGCTGTGGCCTAGCCTGCGGCAAACCGCTCGCCTGTGGACGCCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGGCGGCCGAACTCTGCCGCCAGAGCTGCACCAAGCCTCGTCTGGCCTGTGGACACAAGTGTGCTGCTCCCTGCCACGACAGCGACTGCCCGGAAACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAACAGAACCGGAGCTGCCAGGAGCTCGCCAGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGGGGCAACTACATGGAGCTCAGTGAGATTCTGGCGCCCACCAAAaccaacaaatcaaacaaaacACTGGACTGCAATGAGGAGTGTCGTCTGCTAGAGCGCAATCGTCGTTTGGCCATCGGTTTGCAGTCGCGCAATCCGGACACGCAGTTGAAGTCCCTCACCAAGTACTCGGAATTCACACGCGGATTCGCCAAGCGTAATCCGGTTTTAACCAAGAGCGTCTATGAAACGCTAAGCGATTTGGTCAAGTTGGCCAAGGAGAGCAAGCAAAGGTCAAGAAGTCACTCGTTTCCCACTATGAGCCGGGAGAAGCGTCAATTGGTGCACGAACTGTGCGAAGTTTTTGGCGTAGAGTCCGTCTCCTACGACAAGGAGCCCAACCGCAATGTGGTTGCTACGGCACACAAGGAGCGCTGTTGGTTGCCCGCCACAAGCATCATGGAAGTTTTGGCTCGAGAGTCCGGACAGCGTCGCGTTCCAGTTCCCAATAATAATGCCTGGAGTCTCAAAAAGTAA
Protein Sequence: MAEYWQQEQQQMNGSGGASAARDESASAFNGGSAASASTAVEATAAAAGSGNNNNNYVNFNQFITQHNLASSNVTACNNIGSGGGAFGLLPNSNSSSNSASTSGNNSNSFGGPYLGYLNGDGGASGGDATINNYAASNAYPVMYSPFGNNPFASGSNFDFSTSKLQASAPEFVPNFAKLSLSAAAGQEATSSSNSNSRNNNSNNNNSTARESNSEIVNEALTNNHQHHHHQQQQQQHQHQQQHQRLPKPHGSNSRQQRRNDYREDRIERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQQQPQQHQHQHQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQPLQCEATCDKLLNCSEHRCQQICHAGKCEPCGEQVQQNCHCGKQQREVQCTRESQDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKLPVPSEQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQANFSCGLACGKPLACGRHKCIRPCHEGDCQQAAELCRQSCTKPRLACGHKCAAPCHDSDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTNKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPVLTKSVYETLSDLVKLAKESKQRSRSHSFPTMSREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPNNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00602263; iTF_00602264; iTF_00534265;
80% Identity: -