Basic Information

Insect: Drosophila suboccidentalis
Gene Symbol: stc
Assembly: GCA_037043435.1
Location: JBAMBK010000709.1:11022-17678[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.2 1.6e+04 -3.7 0.5 15 18 378 381 377 382 0.79

2 16 3 2.1e+04 -4.1 1.6 15 19 405 409 404 409 0.81

3 16 0.086 6.1e+02 0.8 2.0 4 11 438 445 437 446 0.90

4 16 8.9e-07 0.0064 16.7 15.1 1 19 450 467 450 467 0.93

5 16 1.6 1.1e+04 -3.2 1.2 6 10 493 497 492 497 0.90

6 16 1e-07 0.00072 19.8 13.8 1 18 503 520 503 521 0.98

7 16 2.6 1.8e+04 -3.9 1.5 7 13 525 531 525 532 0.75

8 16 3.1e-09 2.2e-05 24.6 12.9 1 19 561 579 561 579 0.98

9 16 1.7 1.2e+04 -3.3 0.5 5 10 609 614 609 614 0.90

10 16 5.5e-05 0.39 11.0 16.5 4 19 627 642 620 642 0.86

11 16 0.089 6.4e+02 0.8 11.6 1 11 682 692 682 704 0.79

12 16 4.3e-10 3e-06 27.4 15.1 1 18 709 726 709 727 0.97

13 16 3 2.1e+04 -4.4 1.2 6 10 756 760 756 760 0.88

14 16 3 2.1e+04 -7.7 9.9 10 18 774 783 763 784 0.76

15 16 2.5e-05 0.18 12.1 13.7 1 16 820 835 820 845 0.93

16 16 2.9e-07 0.0021 18.3 14.5 1 19 852 871 852 871 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.2	1.6e+04	-3.7	0.5	15	18	378	381	377	382	0.79
2	16	3	2.1e+04	-4.1	1.6	15	19	405	409	404	409	0.81
3	16	0.086	6.1e+02	0.8	2.0	4	11	438	445	437	446	0.90
4	16	8.9e-07	0.0064	16.7	15.1	1	19	450	467	450	467	0.93
5	16	1.6	1.1e+04	-3.2	1.2	6	10	493	497	492	497	0.90
6	16	1e-07	0.00072	19.8	13.8	1	18	503	520	503	521	0.98
7	16	2.6	1.8e+04	-3.9	1.5	7	13	525	531	525	532	0.75
8	16	3.1e-09	2.2e-05	24.6	12.9	1	19	561	579	561	579	0.98
9	16	1.7	1.2e+04	-3.3	0.5	5	10	609	614	609	614	0.90
10	16	5.5e-05	0.39	11.0	16.5	4	19	627	642	620	642	0.86
11	16	0.089	6.4e+02	0.8	11.6	1	11	682	692	682	704	0.79
12	16	4.3e-10	3e-06	27.4	15.1	1	18	709	726	709	727	0.97
13	16	3	2.1e+04	-4.4	1.2	6	10	756	760	756	760	0.88
14	16	3	2.1e+04	-7.7	9.9	10	18	774	783	763	784	0.76
15	16	2.5e-05	0.18	12.1	13.7	1	16	820	835	820	845	0.93
16	16	2.9e-07	0.0021	18.3	14.5	1	19	852	871	852	871	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTATtggccgcagcagcagcagatgaaCGGATCTGGTGGCGCTTCAGCAGCTCGGGATGAGTCAGCTTCTGCCTGCAATGGCGGCAGCGCtgcttctgcctctgcctcagtCGAAGCCACTGCCTCAGCCGCAGTCGCAGGCAGCggccacaacaataacaactatgTGAACTTTAATCAGTTTATCACGCAACATAATCTGGCCAGCTCCAATGTGACTGCCTACAACAACATTGGAGGTGGCGGCGGTGCCTTCGGACTGTtgcccaacagcaacaactccaACTCCTCCACCTCAGCATCCCGATCCGCATCCGCCtccggcaacaacagcaacagttttgGCGGACCTTATGTGGGTTACCTAAACGGCGATGGAGGAGCGAGCGGAGGCGTCGCTACCACTAACAATTATGCAGCATCAAGTGCTTATCCCAATCTGTACTCACCATTTGGCAATAATCCCTTTGCCTCCGGCAGCAACTTTGATTTCAGCACATCGAAGCTGCAGGCGTCGGCACCTGAATTTGTGCCCAACTTTGCCAAGCTGAGTCTGAGTCAGGAGGCGACATcgtccagcaacagcaacagtagaaacaacaacagcaacaacaacaacagcactgCCAGAGAGTCCAACAGTGAAACAGTCAACGAGGCATCGACAAAcaatcatcaacatcaacagaatcaacagcatcaacagcatcaAAGGCTGCCAAAAGCTCATGGCACAAACAGTCGACAGCAGCGACGCAACGATTATCGGGAGGATCGAATTGAACGCAACGAGGATCGGTATGATCGCAAGAAGCCGCAGAAGCAACAGCGCTACGATAATCATCGCAGCAATAAGCGACGCGATGATTGGAATCGCAATCGGGATCGCATCAATGGTTATCCACGTGCCAGCGAGGAACTGgacaccagcaacagcaacgatagCGCGCATCCCTCGCCggagaagcaacaacaacatcagcagcaacaaatctCGCCGAGACGAGCTCCAGATAATGAGAAGCTGTCGCAGCGCGAGAAGCTGATGCGAGACATCGAGCAGCGTCGTCTGGAGTGTCTGGTGTGTGTGGAGCAGATCAAGGCGCATCATGGCACTTGGTCGTGCCAGAACTGTTACCATGTGCTGCATCTCAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCCGCCGAGGGCTGGCGATGCCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCGCGCGAGTATCTCTGCTTCTGTGGCAAGCTAAAGAATCCGCCACTGACACGCACCGAGCTGGCGCACAGCTGTGGCGAGCTCTGTTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACCCTGCTCTGCCATCCGGGACCGTGTCCGCCGTGCCAGGCGAACGTGAGTCGCAGCTGCGGCTGCGGGCGCACCAGCAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAGGCCGTTTGCGACAAGCTGCTCAACTGCAGCGAGCATCGTTGCCAGCAGATCTGTCACGCCGGCAAGTGTGAGCCGTGCGGGGAGCAGGTGCAGCAGAACTGCCACTGCGGCAAGCAGCAGCGCGAGGTGCAGTGCACGCGGGAGAGCCAGGACAAGCGCAGCTATTCGTGCAAGGAGTGCTGTGGCAAACCGTTGCCCTGCGGCAATCACAAGTGCAAGGATTCCTGCCACGCCGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACGCAAATCACGAGCTGCCCGTGCGGAAAGCTGCCCGTGGCGTCGGAGCAGCGCAGCAGTTGCCTGGATCCGGTGCCCACGTGCGAGGGCGTCTGCGGCAAGACGTTGCGCTGTGGCAAGCCGGCGCATCCGCATCAATGCACCAGCAAGTGCCACCTGGGCCAGTGTCCGCCCTGCACGAAGCAGACGGCGGTCAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGGCAGCTGTCGACGCGAGCGGACGACGCCCGCTGCAAGCGACGCTGCACCAAGAAGCGCAGCTGCGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCCTGCAACCGGACGCTGAGCTGCGGCCGCCACAAGTGCGACCAGCCGTGTCATCGCGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGTGCGGAGGTCATCTATCCACCGGTGCCCTGTGGCACCAAGAAGCCCATCTGCAAGCGGCCCTGCTCCCGCACCCACGGCTGCGAGCATCCGCCGCAGCACAACTGCCATGCGGCGGCCACGTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGTCACGGCAACCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGGCAACTTCAGCTGTGGCCTCGCCTGCGGCAAACCGCTCGCCTGTGGACGCCACAAGTGCATCCGGCCCTGCCACGAGACCGACTGCCAGCAGCCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCTCGCCTGCTCTGTGGACACAAGTGTGCTGCTCCTTGCCACGACGGCGACTGCCCGGAAACGCCGTGCAAGGAGCTCGTCGAGGTGCAGTGCGAGTGCGGCAATCGCAAACAGAACCGCAGCTGCCAGGAACTGGCCAGGGAGCACAGCCGCATCGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGGGGCAACTACATGGAACTCAGCGAGATTCTGGCGCCCACCaaaacaatcaaatcaaacaaaacACTGGATTGCAATGAGGAGTGTCGTCTGCTGGAGCGCAATCGTCGATTGGCCATCGGATTGCAGTCACGTAATCCGGACACGCAGATGAAGTCCCTCACCAAGTACTCGGAATTCACACGCGGATTTGCCAAGCGCAATCCAGCTTTAACCAAGAGCGTCTATGAAACATTAAGCGATTTGGTTAAGCTGGCCAAGGAGAGCAAGCAAAAGTCAAGAAGCCACTCGTTTCCCACTATGAACCGGGAGAAGCGTCAATTGGTGCACGAACTATGCGAAGTTTTTGGCGTGGAGTCCGTCTCCTACGACAAGGAGCCCAACCGCAATGTGGTTGCTACGGCACACAAGGAGCGCTGTTGGTTGCCCGCCACAAGCATCATGGAGGTGTTGGCTCGCGAATCCGGACAGCGTCGCGTTCCAGTTCCCAATAATAATGCCTGGAGTCTCAAAAAGTAG
Protein Sequence: MAEYWPQQQQMNGSGGASAARDESASACNGGSAASASASVEATASAAVAGSGHNNNNYVNFNQFITQHNLASSNVTAYNNIGGGGGAFGLLPNSNNSNSSTSASRSASASGNNSNSFGGPYVGYLNGDGGASGGVATTNNYAASSAYPNLYSPFGNNPFASGSNFDFSTSKLQASAPEFVPNFAKLSLSQEATSSSNSNSRNNNSNNNNSTARESNSETVNEASTNNHQHQQNQQHQQHQRLPKAHGTNSRQQRRNDYREDRIERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRASEELDTSNSNDSAHPSPEKQQQHQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTSKLMQCAMKQPLQCEAVCDKLLNCSEHRCQQICHAGKCEPCGEQVQQNCHCGKQQREVQCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVASEQRSSCLDPVPTCEGVCGKTLRCGKPAHPHQCTSKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQGNFSCGLACGKPLACGRHKCIRPCHETDCQQPGELCRQSCTKPRLLCGHKCAAPCHDGDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQMKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPNNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00586362;
80% Identity: -