Basic Information

Insect: Drosophila limbata
Gene Symbol: stc
Assembly: GCA_963924055.1
Location: OZ001353.1:3147223-3151220[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.4 2e+04 -3.7 0.5 15 18 366 369 365 370 0.79

2 15 2 2.8e+04 -4.1 1.6 15 19 393 397 392 397 0.81

3 15 0.057 7.9e+02 0.8 2.0 4 11 426 433 425 434 0.90

4 15 5.9e-07 0.0082 16.8 15.1 1 19 438 455 438 455 0.93

5 15 1.7 2.4e+04 -3.9 0.9 6 10 481 485 480 485 0.88

6 15 6.7e-08 0.00093 19.8 13.8 1 18 491 508 491 509 0.98

7 15 1.7 2.4e+04 -3.9 1.5 7 13 513 519 513 520 0.75

8 15 2e-09 2.8e-05 24.6 12.9 1 19 549 567 549 567 0.98

9 15 3.6e-05 0.5 11.0 16.5 4 19 615 630 608 630 0.86

10 15 0.062 8.7e+02 0.7 11.7 1 11 670 680 670 692 0.79

11 15 2.8e-10 3.9e-06 27.4 15.1 1 18 697 714 697 715 0.97

12 15 2 2.8e+04 -4.4 1.2 6 10 744 748 744 748 0.88

13 15 2 2.8e+04 -7.7 9.9 10 18 762 771 751 772 0.76

14 15 5.9e-08 0.00082 20.0 13.7 1 16 808 823 808 833 0.94

15 15 0.00025 3.4 8.4 12.9 1 19 840 859 840 859 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.4	2e+04	-3.7	0.5	15	18	366	369	365	370	0.79
2	15	2	2.8e+04	-4.1	1.6	15	19	393	397	392	397	0.81
3	15	0.057	7.9e+02	0.8	2.0	4	11	426	433	425	434	0.90
4	15	5.9e-07	0.0082	16.8	15.1	1	19	438	455	438	455	0.93
5	15	1.7	2.4e+04	-3.9	0.9	6	10	481	485	480	485	0.88
6	15	6.7e-08	0.00093	19.8	13.8	1	18	491	508	491	509	0.98
7	15	1.7	2.4e+04	-3.9	1.5	7	13	513	519	513	520	0.75
8	15	2e-09	2.8e-05	24.6	12.9	1	19	549	567	549	567	0.98
9	15	3.6e-05	0.5	11.0	16.5	4	19	615	630	608	630	0.86
10	15	0.062	8.7e+02	0.7	11.7	1	11	670	680	670	692	0.79
11	15	2.8e-10	3.9e-06	27.4	15.1	1	18	697	714	697	715	0.97
12	15	2	2.8e+04	-4.4	1.2	6	10	744	748	744	748	0.88
13	15	2	2.8e+04	-7.7	9.9	10	18	762	771	751	772	0.76
14	15	5.9e-08	0.00082	20.0	13.7	1	16	808	823	808	833	0.94
15	15	0.00025	3.4	8.4	12.9	1	19	840	859	840	859	0.96

Sequence Information

Coding Sequence: ATGGCCGAGTATTggccgcagcagcatcagatGAACGGATCTGGTGGCGCTTCAGCAGCTCGGGATGAGTCAGCTTCTGCCTGCAATGGCAGCagcgctgcttctgcttctgcctctGCATCCGTCGAAGCCACTGCCTCAGCCGCAGTCGcaggcagcggcaacaacaataacaactatgTAAACTTTAATCAGTTTATCACGCAACATAATCTGGCCAGCTCCAATGTGACTGCCTACAACAACATTGGAATTGGCGGCGGTGCCTTCGGACTGTCCTCCACTTCTGCATCCGCATCCGCCtccggcaacaacagcaacagttttGGCGCACCTTATGTGGGATACCTAAACGGCGATGGAGGAGCGAGCGGAGGCGTCGCTACCATTAACAATTATGCTGCATCAAGTGCTTATCCCAATCTGTATTCACCATTTGGCAACAATCCCTTTGCCTCCGGCAGCAACTTTGATTTCAGCACGTCCAAGCTGCAGGCGTCGGCACCTGAATTTGTGCCCAACTTTGCCAAGCTCAGTCTGAGTCAGGAGGCGACAACGTCCAgtaggaacaacaacaacagcactgCCAGAGAGTCCAACAGTGAAACAGTCAACGAGGCATCGACAAATAATCATCAACATCCACAGCATCAACAGAATCAACAGCATCAAAGGCTGCCAAAAGCTCATGGCACAAACAGTCGACAGCAGCGACGCAACGATTATCGAGAGGATCGAGTTGAACGCAACGAGGATCGCTATGATCGCAAGAAGCCGCAGAAGCAACAGCGCTACGATAATCACCGCAGCAATAAGCGACGCGATGACTGGAATCGCAATCGGGATCGCATCAATGGCTATCCACGTGCCACCGAGGAACTGgacaccagcaacagcaacgataGCGCACATCCCTCGCCggagaagcagcaacaaccgccgcaacatcatcagcagcaacaaatctCGCCGAGACGAGCTCCAGACAATGAGAAGCTGTCGCAACGCGAGAAACTGATGCGAGACATCGAGCAGCGTCGTCTGGAGTGTCTGGTGTGTGTGGAGCAGATTAAGGCGCATCATGGCACTTGGTCGTGCCAGAACTGTTACCATGTGCTGCATCTCAAGTGCACCATCACGTGGGCGAGCAGCTCCAAGTCCGCCGAGGGCTGGCGATGCCCCGCCTGCCAGAATGTGCTGGAGGAGCTGCCACGCGAGTATCTCTGCTTCTGTGGCAAGCTGAAGAATCCGCCATTGACGCGCACCGAGCTGGCGCACAGCTGTGGCGAGCTCTGTTGCCGTGTCGAGGGCTGCAGCCATGCGTGCACCTTGCTCTGCCATCCGGGACCGTGTCCGCCGTGCCAGGCGAATGTGAGTCGCAGCTGCGGCTGCGGACGCACCAACAAGCTGATGCAGTGCGCCATGAAGCAGCCGCTGCAGTGCGAGGCCATTTGCGACAAGCTGCTCAACTGCAGCGAGCATCGTTGCCAGCAGATCTGTCATGCCGGCAAGTGTGAGCCGTGCGGGGAGCAGGTGCAGCAGAACTGCCACTGTGGCAAGCAGCAGCGGGAGGTGCTGTGCACGCGGGAGAGTCAGGACAAGCGCAGCTACTCGTGCAAGGAGTGCTGCGGCAAACCGTTGCCCTGTGGCAATCACAAGTGCAAGGACTCTTGCCACGCCGGCGCCTGTCGTCCCTGCAAAGTGAGTCCCTCGCAAATCACGAGTTGTCCGTGTGGAAAGCTGCCCGTGGCGCCGGAGCAGCGCAGCAGTTGCCTTGACCCGGTGCCCACTTGCGAGGGCATCTGCGGCAAGACCCTGCGCTGTGGCAAGCCGGCGCATCCGCATCAGTGCACCAGCAAGTGCCACCTGGGCCAATGCCCGCCCTGCACGAAGCAGACGGCCGTCAAGTGCCGCTGCGGCCACATGGACCAGATGATCAAGTGCCGGCAGCTTTCGACGCGAGCGGACGACGCCCGCTGCAAGCGGCGCTGCACCAAGAAGCGCAGCTGTGGCAAGCACAAGTGCAACGCCGAGTGCTGCATCGACATCGATCACGCCTGTCCGCTGCCCTGCAACCGGACGCTGAGCTGCGGTCGCCACAAGTGCGACCAGCCCTGTCATCGGGGCAACTGCCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGCGAGTGCGGTGCGGAGGTCATCTATCCACCTGTGCCCTGTGGCACCAAGAAGCCCATCTGCAAGCGGCCCTGCTCCCGGACCCACGGCTGTGAGCATCCGCCGCAGCACAACTGCCATGCGGCGGCCACGTGCCCGCCCTGCATGATGTTCACCACGAAATGGTGTCACGGCAACCACGAGCAGCGCAAGACCATTCCCTGCTCCCAGGGCAACTTCAGCTGTGGCCTCGCCTGCGGCAAGCCGCTGGCCTGTGGACGCCACAAGTGCATCCGGCCCTGTCACGAGGGCGACTGCCAGCAGGCGGGCGAACTGTGCCGCCAGAGCTGCACCAAGCCTCGCCTGCTCTGTGGACACAAGTGTGCTGCTCCTTGTCACGACAGCGTCTGCCCTGAAACGCCGTGCAAGGAGATCGTCGAAGTGCAGTGCGAGTGCGGCAATCGCAAACAGAACCGCAGCTGCCAGGAACTGGCCCGGGAGCACAGTCGCATCGCCACCGCCCAGCTGGCCTCCTCCATGGCCGAGATGTCGCGGGGCAACTATATGGAACTCAGCGAGATTCTGGCGCCCACCAAAacaatcaaatcaaacaaaacACTGGATTGCAATGAGGAGTGTCGACTGCTAGAGCGTAATCGTCGGTTGGCCATCGGATTGCAGTCGCGAAATCCGGACACTCAGTTGAAGTCCCTCACCAAGTACTCGGAGTTCACACGCGGATTTGCCAAGCGCAATCCAGCTTTAACCAAGAGCGTCTATGAAACGCTAAGCGACTTGGTTAAGTTGGCCAAGGAGAGCAAGCAAAAGTCAAGAAGTCACTCGTTTCCCACAATGAACCGGGAGAAGCGTCAACTGGTGCACGAACTATGCGAAGTTTTTGGCGTGGAGTCCGTCTCCTACGACAAGGAGCCCAACCGCAATGTGGTTGCTACGGCACACAAGGAGCGCTGTTGGTTGCCCGCCACAAGCATCATGGAGGTGTTGGCTCGCGAGTCCGGGCAGCGTCGCGTTCCAGTTCCCAATAATAATGCCTGGAGTCTCAAAAAGTAG
Protein Sequence: MAEYWPQQHQMNGSGGASAARDESASACNGSSAASASASASVEATASAAVAGSGNNNNNYVNFNQFITQHNLASSNVTAYNNIGIGGGAFGLSSTSASASASGNNSNSFGAPYVGYLNGDGGASGGVATINNYAASSAYPNLYSPFGNNPFASGSNFDFSTSKLQASAPEFVPNFAKLSLSQEATTSSRNNNNSTARESNSETVNEASTNNHQHPQHQQNQQHQRLPKAHGTNSRQQRRNDYREDRVERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQQQPPQHHQQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLEELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQPLQCEAICDKLLNCSEHRCQQICHAGKCEPCGEQVQQNCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKVSPSQITSCPCGKLPVAPEQRSSCLDPVPTCEGICGKTLRCGKPAHPHQCTSKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHGCEHPPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQGNFSCGLACGKPLACGRHKCIRPCHEGDCQQAGELCRQSCTKPRLLCGHKCAAPCHDSVCPETPCKEIVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNEECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPNNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00586362;
80% Identity: -