Dqud010706.1
Basic Information
- Insect
- Drosophila quadrilineata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_018150725.1
- Location
- JAECWN010000432.1:16452204-16454952[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-119 4.5e-115 383.9 27.2 1 299 30 317 30 318 0.97 2 2 0.02 3.2e+02 0.2 3.7 208 245 335 371 320 391 0.65
Sequence Information
- Coding Sequence
- ATGGACACCACAAGCGCCACCGGTCGGCGGCGAAACAATATGTGTGCCAACGCCGAGGATAATGCACTCGACCAAATTACAAAGGAGGCCGAAGCGCGTTTAGCGGCCCGACGGCAGGCACGGGCTGAAGCGCGGGAGATTCGGATGCGGGAGCTGGAGCGGCAGCAGAAGGAGCAGGAACAGAATGCAGATCGTGCCTTTGACATGCAGAATATCAGCGGCAGTGTCATACACGACACACATCCGACGCGACTTTTTGGCGGTCTGATGAATATGACGCGGGCGGCGGCATCTCGTCGCAGCAGTGAGGATTCTTTGGAGGAGGAAGGACGCAGCTTACGTGACATCAAACATGAACTCAAGGAAGTGGAGGAGCGCTTCCGCAAGGCAATGATCACGAATGCCCAGCTGGACAACGACCGCTCGTCCCAAAGTTATGAAGTCAAGCTACTCAAGGACAAAAGCGAAACGATGCAGGAGGCATTCGCCCAGCTGCAGAGGGAGTTGAAGAACAAACTGCGTGACTGCAACGCCCTCAAACGGAACTTGGATCGCACCACGCTGGAGCTGAATCTGGTGCAGGGCCAATTGAATGAGCGGGATGCGCTCATTGCTGAGCATGGTCTGGTCATTGTTGCCATCGAGAATACCGATGGCAGTGATGCCAAGCGTGCTTTAGTCAGTGTCGAGAATGCCAACATTCTGGCAACCGTACAGGGTTCACTCGATGTGAGACTCAAGAAATTCACGGAAGAGAAACAGCGACTGCTGATGGAGGTGCAGGTGTTGCATGAACAACTGGATGCCTATAAAACTGAGGGACGGGCAGGTCGGTGTAGTTCGTTGAACGGTTCCCTGGGCTACGACGATGATTATGATGTTCAAAGAGAAGCAAACAAAATCATATCAGATTACAAATACAAACTGCAAAAGGCGGAGCAAGAAATCGCCAATCTTCAGGCCAGTTTATCGCGTTCCGAGACGCAGGTTATTCGATATAAAAGTACCGCGGAGGCAGCCGAAAAAGTTGAAGCCGAGTTGAAAGTGGAACGCCGTAAACTGCAGCGTGAGCATCGTGAGATTCTGGAGCGTTTGGAGGAAGTGGAAACTGCAAATAATCATCTACTGAAGCGTCTGGATAAGCTAAAGAATGCAAAGAGCACCATCCTGAAGGACTTATGA
- Protein Sequence
- MDTTSATGRRRNNMCANAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRAFDMQNISGSVIHDTHPTRLFGGLMNMTRAAASRRSSEDSLEEEGRSLRDIKHELKEVEERFRKAMITNAQLDNDRSSQSYEVKLLKDKSETMQEAFAQLQRELKNKLRDCNALKRNLDRTTLELNLVQGQLNERDALIAEHGLVIVAIENTDGSDAKRALVSVENANILATVQGSLDVRLKKFTEEKQRLLMEVQVLHEQLDAYKTEGRAGRCSSLNGSLGYDDDYDVQREANKIISDYKYKLQKAEQEIANLQASLSRSETQVIRYKSTAEAAEKVEAELKVERRKLQREHREILERLEEVETANNHLLKRLDKLKNAKSTILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00472354;
- 80% Identity
- -