Dpse019450.1
Basic Information
- Insect
- Drosophila pseudotakahashii
- Gene Symbol
- bab1
- Assembly
- GCA_035046095.1
- Location
- JAWNOE010000285.1:1288788-1291025[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 2.2e-14 53.2 0.0 1 43 55 98 55 100 0.95 2 2 7.9 1.4e+04 -3.8 0.7 6 13 213 220 210 222 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCCTGGATGGGTGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGGGGTCCCCTGAAGTCCTGGCGCCCCGAGACGATGGCCGAGGCCATCTTCAGTGTCCTGAAGGAGGGTCTCTCGCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTATCCCACCTTCGTTCTGTATGCGAATAGGGTGCACAACATGCTGGGTCCCTCCATCGACGGCGGTCCGGATCTGCGGCCCAAGGGCCGGGGCAGGCCGCAAAGAATCCTCCTCGGCATCTGGCCCGATGAGCACATCAAGGGCGTCATCAAGACGGTGGTTTTCCGCGACACCAAGGACATCAAGGACGATAGCCTGGCGGCCCACATGCCGCCCTACGGCCGACATTCGCCCGCGTTTCCCTTGCAGGATCTTCCCCTCAGCTATCCCGGCGCAAGTGGCGCCCTGGCAGGAGCGCCCAGCTCGCTGGCCTGTCCGAATGGCAGTGGTCCGCAGGCCGGAGTGGGCGGCGGAGTGGGTGGTGACCAGCACATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCAGTGGCCCACAACATCCGACAGCAGATGCAAATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGACCACCGCCCGTTCCGCCCGGTTTATTCAATCTGCCACCTCACccgggagtgggagtgggagtgggtgGGGTGGGGGTGCCAGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCCTGAGCAGCGGCTCAGGGCCCAGGCATGCACCTTCGCCATGCGGTCCCGCTGGCCTCCTGCCGAATCTGCCGCCCAGCATGGCCGTTGCCctgcaccaccagcagcagcagcaggccgcccatcaccagcagcagcaacagcaggccgCCCATCACCACCTGCAACAGCTgcacctgcagcagcagcaacaggcccACTTGCAccaccatcagcagcagcagcagcatcaccaCAAGTCCGGTTTCGGTGCCAGCTCCAGTTCCtcagcctcctcctcctcgttgaGCCAGCACCATCCGACCTCCAAGGCCAAGGGCAGCCCTCTGCGCAGCGAAACTCCTCGACTGCACTCCCCGCTCGGCGATCTTGGCCTGGACATGGCCGGCTACAAGCGGGAGTTCTCGCCCAGTCGCCTGTTCGCCGAGGATCTGGCTGAGTTAGTGGGCGCCAGTGTCTCAtcttcctcctcctcagcGGCAGCGGGCGCAGCTCCTCCAGAAAGATCCGGCGGAGGCTCCTCCCAGGCAGCGGGAACCGATGCTCCCAGTTCCTCGAGCAGTGGTGGCATCAAAGTGGAACCCATTACCACCACTAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGAPSSLACPNGSGPQAGVGGGVGGDQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGVGVGGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAHHQQQQQQAAHHHLQQLHLQQQQQAHLHHHQQQQQHHHKSGFGASSSSSASSSSLSQHHPTSKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAGAAPPERSGGGSSQAAGTDAPSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547989;
- 90% Identity
- iTF_00536689; iTF_00547989; iTF_00578459; iTF_00578457; iTF_00604767;
- 80% Identity
- -