Dpro014489.1
Basic Information
- Insect
- Drosophila prostipennis
- Gene Symbol
- bab1
- Assembly
- GCA_037075205.1
- Location
- JBAMCJ010006189.1:11856-14406[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-16 1.5e-13 50.4 0.0 1 40 55 95 55 96 0.94 2 2 8.4 1.1e+04 -3.6 0.1 4 11 206 213 206 213 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCGCATGCCTGGATGGGTGCCACCGGATCCACGCTGGCAGCAGACAGCTACCAGTATCAGTTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAAAATCTGATGCACCACATGCGCTTCCGCGAGCGAGGTCCTCTGAAGTCCTGGCGACCCGAGACGATGGCCGAGGCCATTTTCAGTGTCCTCAAGGAGGGACTCTCGCTGTCGCAGGCCGCCCGCAAATACGACATCCCCTATCCCACTTTTGTGCTCTATGCGAATAGGAGAATCCTGCTGGGCATCTGGCCCGACGAGCACATCAAGGGCGTCATCAAGACGGTGGTCTTCCGCGACACCAAGGACATCAAGGACGATAGCCTGGCGGCCCACATGCCGCCCTACGGCCGACATTCGCCCGCGTTTCCCTTGCAGGATCTTCCGCTGAGCTATCCCGGCGCAAGTGGCGCCCTCGCAGGGGCGCCCAGCTCGCTGGCCTGCCCGAATGGCAGTGGTCCGCAGGCCGGAGGAGTGGGAGGAGGCGTGGGTGGTGGCGATCAGCCCATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCAGTGGCCCACAACATCCGACAGCAGATGCAAATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGACCACCGCCCGTTCCGCCTGGTTTATTCAATCTGCCACCTCACCCGGGAGTTGGGGTGGGGGTGCCAGGAGCGGGCGGAGGCAGGGCCAGCATATCGCCGGCCCTGAGCAGCGGCTCAGGGCCCAGGCATGCACCTTCGCCATGCGGTCCCGCTGGCCTCCTGCCGAATCTGCCGCCCAGCATGGCCGTTGCCctgcaccaccagcagcagcagcagcagcaggtcgCCCATCACCAGCAACAGGCTGCGCACCATCATCTCCAGCAGCTccacctgcagcagcagcagcagcagctgcaccaccatcagcagcagcagcagcatcagcagcatcaCCACAAGTCCGTTGGCTTCGGTGCCAGCTCCAGTTCCtcagcctcctcctcctccttgggcCAGCATCATCCGGCCTCCAAGGCCAAGGGCAGTCCGCTGCGCAGCGAAACTCCTCGCCTGCACTCCCCGCTCGGCGATCTTGGCCTGGACATGGCCGGCTACAAGCGGGAATTCTCGCCCAGTCGCCTGTTCGCCGAGGATCTGGCTGAGTTGGTGGGCGCCAGTgtctcctcttcctcctcctcggcggcAGCGGGCGCTGCGCCTCCAGAAAGATCCGGCGGAGGCTCCTCCCAGGCGGCGGGCACCGATGCGCCCAGTTCCTCCAGCAGTGGTGGCATCAAAGTGGAACCCATTACCACCACCAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLAAHMPPYGRHSPAFPLQDLPLSYPGASGALAGAPSSLACPNGSGPQAGGVGGGVGGGDQPMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQQQVAHHQQQAAHHHLQQLHLQQQQQQLHHHQQQQQHQQHHHKSVGFGASSSSSASSSSLGQHHPASKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAGAAPPERSGGGSSQAAGTDAPSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547989;
- 90% Identity
- iTF_00581457;
- 80% Identity
- -