Dsuz006103.1
Basic Information
- Insect
- Drosophila suzukii
- Gene Symbol
- bab1
- Assembly
- GCA_013340165.1
- Location
- WWNF01000018.1:1132043-1133832[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-18 1.6e-14 53.2 0.0 1 43 55 98 55 100 0.95 2 2 1.4 3.2e+03 -2.2 0.2 17 23 201 207 195 215 0.57
Sequence Information
- Coding Sequence
- ATGATGGAGAACTCACACGCCTGGATGGGGGCCACCGGATCCACGTTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAACCAGAACCTGATGCACCACATGCGCTTCCGCGAGCGGGGTCCCCTGAAGTCCTGGCGCCCCGAAACCATGGCCGAGGCCATCTTCAGTGTGCTGAAGGAGGGGCTCTCGCTGTCGCAGGCCGCCCGCAAGTACGACATCCCGTACCCCACCTTCGTGCTCTACGCCAACCGGGTGCACAACATGCTGGGACCCTCCATCGACGGCGGGCCGGACCTGCGGCCCAAGGGGCGCGGCAGACCGCAGAGGATCCTCCTGGGCATCTGGCCCGACGAGCACATCAAGGGCGTCATTAAGACGGTGGTTTTCCGCGACACCAAGGACATCAAGGACGACAGCCTGGCGACTCACATGCCGCCCTACGGTCGGCATTCGGACCTTCCCCTGAGCTACCCCGGCGCAAGTGGCGCCCTGGCAGGAGCGCCCAGCTCGCTGGCCTGTCCGAACGGCAGCGGTCCGCAGGCCGGGGTGGGCGGAGTGGCTGGTGAGCAGCACATGTCGCAGGAAACTGCCGCTGCGGTGGCCGCAGTGGCCCACAACATCCGACAGCAGATGCAAATGGCAGCGGCCGTGCAGCATCAGCACGGGGAGGCGGGACCACCGCCCGTTCCGCCCGGCTTGTTCAACCTGCCGCCCCATCCCGGAGTGGGTGGCGGCGTGGGGGTGCCAGGAGCGGGCGGAGGCAGGGCCAGCATCTCGCCGGCCTTGAGCAGCGGCTCGGGGCCCAGGCATGCACCCTCGCCATGCGGTCCCGCTGGCCTCCTGCCGAATCTGCCGCCCAGCATGGCCGTTGCcctgcaccaccagcagcagcagcaggcggcgcaccaccagcagcagcagcagcaggcggcgCACCACCACCTGCAGCAGCTccacctgcagcagcagcaggcccacttgcaccaccaccagcagcaacagcaacagcaccatCAAGGCGGCCACCAGGTGCCCCACAAGTCCGGTTTCGGCGCCAGCTCCAGTTCCtcggcctcctcctcctcgctggGCCAGCTCCACCCCAATCCCAAGGCCAAGGGCAGTCCCCTGCGCAGCGAGACTCCGCGGCTCCACTCCCCGCTCGGTGATCTGGGCCTGGACATGGCCGGCTACAAGCGGGAGTTCTCGCCCAGCCGACTCTTCGCCGAGGATCTGGCCGAGCTGGTGGGCGCCAGtgtctcctcctcctcctcctcagcGGCAGCGGGCGCAGCGCCTCCGGAGAGATCGGCCGGAGGGTCTTCAGCAGCCGCGGCCACAGATGCGGCCGCTTCCTCGAGCAGTGGGGGCATCAAAGTGGAACCCATCACCACCACTAGCGAGTAA
- Protein Sequence
- MMENSHAWMGATGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDTKDIKDDSLATHMPPYGRHSDLPLSYPGASGALAGAPSSLACPNGSGPQAGVGGVAGEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPPVPPGLFNLPPHPGVGGGVGVPGAGGGRASISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAVALHHQQQQQAAHHQQQQQQAAHHHLQQLHLQQQQAHLHHHQQQQQQHHQGGHQVPHKSGFGASSSSSASSSSLGQLHPNPKAKGSPLRSETPRLHSPLGDLGLDMAGYKREFSPSRLFAEDLAELVGASVSSSSSSAAAGAAPPERSAGGSSAAAATDAAASSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00547989;
- 90% Identity
- iTF_00581457;
- 80% Identity
- -