g6532.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- grh
- Assembly
- GCA_009870125.2
- Location
- CM020869.1:20251991-20284075[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.49 2e+03 -2.0 1.7 80 119 590 639 552 657 0.48 2 3 0.017 69 2.8 0.1 75 115 872 912 863 921 0.85 3 3 9.4e-63 3.8e-59 199.8 0.4 24 221 1035 1227 1021 1229 0.94
Sequence Information
- Coding Sequence
- ATGTCCACATCCACCGCCACAACGAGCGTCATCACGTCCAACGAGCTCTCGTTGTCCGCCCACGGGCACGcccacgcgcacacacactcccacacgcacagccacggccacggtcACTCGCTGCACCAGCACCCCCACAGTCGGATCGGAGTGGGCGTCGGAGGAGTCGGCGTAGGAATCGGTgtaggagtgggagtgggagtccTTAGTGACGCCTCTCTCTCACCCATCCAGCagggaggaggcggcggcggcggaggcgccAACAGTTCCCCCCTGGCGCCCAACGGAGTACCCCTGCTGACCACCATGCACCGCTCCCCGGACAGTCCCCAGCCGGAGCTGGCTACCATGACGAACGTCAACGTCCTGGACCTGCACACAGACTCCTCGAAGCTGTACGACAAGGAGGCGGTCTTCATCTACGAGACGCCCAAGGTGGTGATGCCCGCCGACGGTGCCGCGGACGATGCTCATGCCATCGATGCACGGATCGCGGCCCAGCTGGGCACACAGcacgcccagcagcagcagcagcaacaacaacaacaacagcagcagcagcagacggaGCACCAGCCGCTGGCCAAGATCGAGTTCGACGAGAACCAGATCATCCGCGTCGTGGGACCGAACGGAGAGCAACAGCAGATCATTTCGCGGGAAATCATCAACGGGGAGCATCACATCTTGTCGCGGAACGAGGCCGGAGAGCACATCCTCACGCGCATCGTCAGCGATCCCTCGAAGCTGATGCCCAACGACAATGCGGTGGCCACCGCCATGTACAACCAGGCCCAGAAAATGAACAACGACCACCAGGCCGTCTACCAGACctcgcccctgcccctggacGCCTCCGTGCTGCACTacagcaacgacaacagcaacgtGATCAAAACGGAGGCGGACCTCTACGAGGACCACAAGAAGCATGCGGCCGGCGGGGGCTCGATCATCTACACCACCTCCGACCCGAACGGCGTCAATGTGAACGTGAAACAGCTGCCCCATTTGGCCGTGCCGCAGAAGCTCGACCCGGACCTCTACCAGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAGACCGTCATCTACTCCACCACCGACCAGAAGGGCCTCGAGATCTATTCGGGCGGCGACATCGGCAGCCTCGTCTCCGACGGCCAAGTGGTGGTCCAGGCGGGCCTCCCCtatgccaccaccaccagtgCCACAGGCCAGCCCGTCTACATCGTGGCCGATGTCAGCGAGGACCATTTACAAAGGCGCGGCTTCAGCCTGGACTCCCTGCATCCGGCTATAGGGCAAAGCGAacaccaggagcagcagctccattCTCATCCCCATCCGCACTACCAGGATCATGGCTTAAGTTTGtccctgccaccgccactgccactgccccaccAAGAGCACCAGGAGCATCACCCGCAGTCTGGCCTTACCCCAGCTGGCCTCCTGCTGAACgaggagcagcatcagcaccatcCTGCCCCACAAGCCATCGCCAGTCCAGGGCCATATCCCATCTACAGCTACTACCGCCAGCAGAGCCACGAGGCCTCAAAGgagaccaacaacaacaacaacaacaacaacgatccCCATGGGGCAGAAATGCTGTGGAGCAGTGGAAAGCTCAATGGCCAGACCACACCCATCGATGTCTCGGGCCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCCCACCCCTCGTCATCGGCCTCGGTCAGCACCACTGGCGTTGTCTCCACCACCACAATCtcgcagcaccaccagcagcaacagcagcagcagcaacagcaacagcaacaacaacagcagcagcagcatcccggGGACATTGTGAGTGCCGCAGGCGTGGGGAGTGCAGGCTCCATTGTCTCGACGGcggtgcaacagcagcaacagcaacagcaacaacagcagcagcagctgatcaCCATCAAAAGAGAGCCGGAGGATCTGCGCAAGGATCCGAAGAACGGTAACATTGCCGGAGCGGCGGCAGCGAACGGCGGCGCGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATGCATCGCCACCAGCCGACGAAGCTGAGATTAGCGAGATTAGCCACAGACCCAGCAGCACAACCTGCACAACCACAACCAGAACCCGAACCAGAAccaccagctgcagcagtaGTAGTCCTGCTACCGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTACCTACAGACCTCACATCCCAGCACGGCCAGCGGCGcgggaggaggcggcggcggcggcggcgggggtgGATCTGGAGGAGCCGGATCCCTGCAGGCACAGAGCCCCAGTCCGGGGCCGTACATAACCGCCAACGACTATGGGATGTACACGGCCAGCCGACTGCCGCCCGGCCCCCCgcccaccaccgccaccaccttCATAGCGGAGCCCTACTACCGCGAGTACTTCGCGCCGGACGGACAGGGCGGCTACGTGCCCGCCTCCACGCGCACCATCTACGGAGACGTGGACGTTTCGGTGTCTCAGCCGGGCGGAGTGGTCACCTACGAGGGCCGCTTCACCGGCAACGCCCCCCCGCCCACCACAACCACGCTGCTAACGAGCAGCGTCAGCgtgcaccaccagcagcagcagcagcaacagcaacagccccaacaccagcagcacctccaccaacagcagccacagcagcagcagcaacaccatcaCCCGCAGGACGGCAAGGGCGGCGGCGGGACGCCACTCTATGCCAAGGCCATCACGGCGGCGGGACTCACCGTGGATCTGCCCAGTCCCGACTCGGGCATCGGCACGGACGCCATTACGCCGCGGGATCAGACCAACATACAGCAGTCCTTCGATTACACGGAACTGTGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTGTCCGTGAACAGCATCCAGCAGCGGACAGTGGTCCATGGCAGCCAGAACAGTCCCACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGTTCGCGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaaaaatATTCACAAATGTTGGCTTCCGATATCACCTGGAGAGCCCCATCAGCTCGTCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTACGGGATCACGCTGGAGTATGTGCACGATGCGGATAAGCCCATCAAGAACACGACGGTTAAGAGTGTGATCATGCTCATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGATACGAAGAATTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTGCAATGCCTGAGCACGGATTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAAACGCGCGATGAGGAGCGACGGGCCGCCAAGCGGAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGACCAGAACATTATGACCAGCACACCCATGACCGACTTCGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCAACCTCGGAGCGCGTGATGCTCTACGTGCGGCAGGAGAACGAGGAGGTGTACACCCCGCTGCATGTGGTTCCCCCCACCACAATTGGCCTGCTGAATGCGattgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAGGTGCAGCAGATCGAGGACGATCTGTACGATGTGACGCTGACGGAGCTGCCCAACCAGTAG
- Protein Sequence
- MSTSTATTSVITSNELSLSAHGHAHAHTHSHTHSHGHGHSLHQHPHSRIGVGVGGVGVGIGVGVGVGVLSDASLSPIQQGGGGGGGGANSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPADGAADDAHAIDARIAAQLGTQHAQQQQQQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHQAVYQTSPLPLDASVLHYSNDNSNVIKTEADLYEDHKKHAAGGGSIIYTTSDPNGVNVNVKQLPHLAVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVSEDHLQRRGFSLDSLHPAIGQSEHQEQQLHSHPHPHYQDHGLSLSLPPPLPLPHQEHQEHHPQSGLTPAGLLLNEEQHQHHPAPQAIASPGPYPIYSYYRQQSHEASKETNNNNNNNNDPHGAEMLWSSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASVSTTGVVSTTTISQHHQQQQQQQQQQQQQQQQQQHPGDIVSAAGVGSAGSIVSTAVQQQQQQQQQQQQQLITIKREPEDLRKDPKNGNIAGAAAANGGAGSVITQKILHVDASPPADEAEISEISHRPSSTTCTTTTRTRTRTTSCSSSSPATELEMYATTGGTQIYLQTSHPSTASGAGGGGGGGGGGGSGGAGSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTTATTFIAEPYYREYFAPDGQGGYVPASTRTIYGDVDVSVSQPGGVVTYEGRFTGNAPPPTTTTLLTSSVSVHHQQQQQQQQQPQHQQHLHQQQPQQQQQHHHPQDGKGGGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00574576; iTF_00514656; iTF_00600823;
- 90% Identity
- iTF_00574576;
- 80% Identity
- -