Dsub009725.1
Basic Information
- Insect
- Drosophila subobscura
- Gene Symbol
- grh
- Assembly
- GCA_008121235.1
- Location
- NC:10181158-10232901[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.69 4.5e+03 -3.8 1.3 94 109 174 189 165 212 0.49 2 4 0.58 3.8e+03 -3.5 0.2 88 97 475 484 441 520 0.61 3 4 0.17 1.1e+03 -1.8 1.3 77 111 745 779 737 792 0.68 4 4 3.4e-63 2.2e-59 200.0 0.4 24 221 910 1102 896 1104 0.94
Sequence Information
- Coding Sequence
- ATGTCCACATCCACCGCCACAACGAGTGTCATCACGTCCAACGAGCTCTCGTTGTCCGCCCACGGGCAcgcccactcccacacacacaactcccACACGCACAACTCCCACTCGCACGGCCACGCgctgcaccagcaccagcacagccGCATCGGAGGAGGCCTAGGAATCGGAGTCCTCAGTGACGCCTCCCTATCACCCATCCAGCagggcggaggaggaggaggcggcggcggcggaggtgcCAACAGCTCACCCCTGGCGCCCAACGGTGTACCCCTGCTGACCACCATGCACCGCTCCCCGGACAGTCCCCAGCCGGAGCTGGCGACCATGACGAACGTCAACGTCCTCGACCTGCACACAGACTCCTCCAAGCTGTACGACAAGGAGGCGGTCTTCATCTACGAAACGCCCAAGGTGGTGATGCCCGCCGACGGTGCCACGGAAGATGGCCATGCCATCGATGCGCGGATCGCGGCCCAGCTGGGCACACagcacgcccagcagcagcaacaacagcagcaacagcagcagcagcagcaacagcagcagcaacagacggAGCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAACCAAATCATCCGCGTGGTGGGACCGaacggagagcagcagcagatcatcTCGCGAGAGATCATCAACGGGGAGCACCACATTCTGTCGCGGAACGAGGCCGGGGAGCACATCCTCACGCGCATCGTCAGCGATCCCTCGAAGCTGATGCCCAACGACAATGCGGTGGCCACGGCCATGTACAACCAGGCCCAGAAGATGAACAACGACCACCAGGGCGTCTACCAGACCTCGCCCCTGCCCCTGGACGCCTCCGTGCTGCACtacagcaacgacaacagcaacgtGATCAAAACGGAGGCAGACCTCTACGAGGACCACAAGAAGCATGCGGCCGGCGGTGGCTCCATCATCTACACCACCTCCGACCCGAACGGCGTCAATGTGAACGTGAAGCAGCTGCCCCACCTGGCCGTGCCGCAGAAGCTCGACCCGGACCTCTACCAGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAGACCGTCATCTACTCCACCACCGACCAGAAGGGTCTCGAGATCTACTCAGGCGGCGACATCGGCAGCCTCGTCTCCGACGGCCAAGTGGTGGTCCAGGCGGGCCTGCCCtatgccaccaccaccagtgCCACAGGCCAGCCCGTCTACATCGTGGCCGATGTCAGCGAGGACCATCTACAAAGTGGAAAGCTCAATGGCCAGACCACACCCATCGATGTCTCGGGCCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCACACCCCTCATCATCGGCCTCGGCCGTCAGCACCACTGGCGTTgtctccaccaccaccatctcgcagcaccaccagcagcagcaacagcagcagcagcagcagcaacagcaacagcagcagcatcccggCGACATTGTGAGTGCCGCAGGCGTGGGGAGCGCAGGCTCCATTGTCTCATCGGcggtgcaacaacagcagcagcagcagcagctgataaCCATCAAAAGGGAGCCGGAGGATCTGCGCAAGGATCCGAAGAACGGTAACATTGCCGGAGCGACGGCAGCGAACGGCGGCGCGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATGCGTCGCCACCAGCCGACGAAGCTGAGATTAGCGAGATtagccacagacacagtccCTGCACCACCAGAACcaccagaaacaacagaaccaacagctgcagcagtagTAGTCCTGCCACCGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTACCTACAGACCTCACATCCCAGCACGGCCAGCGGCGCGGGAggaggtggcggcggcagcggcgtcgGTGGTGGCGGATCTGGCGGAGCCGGCGGCTCCCTGCAGGCACAAAGCCCCAGTCCGGGGCCGTACATAACCGCCAACGACTATGGAATGTACACGGCCAGCCGACTGCCGCCCGGCCCCCCgcccaccaccgccaccaccttCATAACGGAGCCCTACTACCGGGAGTACTTTGCGCCGGACGGACAGGGCGGCTATGTGCCCGCCTCCACGCGCTCCATCTACGGCGACGTGGACGTTTCGGTGTCGCAGCCAGGCGGAGTGGTCACCTACGAGGGTCGCTTCACAGGCAACGCCCCCCCGCCCACCACCACGACGCTGCTCACGAGCAGCGTCAGCgtgcaccaccagcaacagcagcagcagcagcagcaacaacagcaacagcaacagccccaacaccagcagcacctccaccaacagcagcagcagcagcagcaccaccatccGCAGGACGGCaagggcggcggcagcacgCCACTCTATGCCAAGGCCATCACGGCGGCGGGACTCACCGTCGATCTGCCCAGTCCCGACTCGGGCATCGGCACGGATGCCATCACGCCGCGGGATCAGACCAACATACAGCAGTCCTTCGATTACACGGAACTGTGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCGGTGTCCGTTaacagcatccagcagcgGACAGTGGTGCATGGCAGCCAGAACAGTCCCACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGTTCGCGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaAAAATATTCACAAATGTTGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCGTCACAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTATGGGATCACGCTGGAGTATGTGCACGATGCGGATAAGCCCATCAAGAATACGACGGTTAAGAGTGTGATCATGCTCATGTTCCGCGAGGAGAAGAGTCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTGCAGTGCCTGAGCACGGATTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACGCGCGATGAGGAGCGACGGGCCGCCAAGCGGAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCAGCGGAGGACATGGAGAAGGTAGGTCAGCCGGGCCTGACTGGCTTGACATTCATCCacacgaatacgaatacgcacacgaatacgaatacgaactcgaactcgaactgcaactccaactcgaaTTCGCCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGTGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGACCAGAACATAATGACCAGCACACCCATGGCGGACTTTGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCGACCTCGGAGCGTGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACACCGCTGCATGTGGTTCCCCCCACCACAATCGGTCTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGACGATATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAGGTGCAGCAGATCGAGGACGATCTGTACGATGTCACGCTGACGGAGCTGCCCAATCAGTAG
- Protein Sequence
- MSTSTATTSVITSNELSLSAHGHAHSHTHNSHTHNSHSHGHALHQHQHSRIGGGLGIGVLSDASLSPIQQGGGGGGGGGGGANSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPADGATEDGHAIDARIAAQLGTQHAQQQQQQQQQQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHQGVYQTSPLPLDASVLHYSNDNSNVIKTEADLYEDHKKHAAGGGSIIYTTSDPNGVNVNVKQLPHLAVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVSEDHLQSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASAVSTTGVVSTTTISQHHQQQQQQQQQQQQQQQQHPGDIVSAAGVGSAGSIVSSAVQQQQQQQQLITIKREPEDLRKDPKNGNIAGATAANGGAGSVITQKILHVDASPPADEAEISEISHRHSPCTTRTTRNNRTNSCSSSSPATELEMYATTGGTQIYLQTSHPSTASGAGGGGGGSGVGGGGSGGAGGSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTTATTFITEPYYREYFAPDGQGGYVPASTRSIYGDVDVSVSQPGGVVTYEGRFTGNAPPPTTTTLLTSSVSVHHQQQQQQQQQQQQQQQPQHQQHLHQQQQQQQHHHPQDGKGGGSTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQPGLTGLTFIHTNTNTHTNTNTNSNSNCNSNSNSPLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMADFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580456;
- 90% Identity
- iTF_00574576;
- 80% Identity
- -