Basic Information

Gene Symbol
grh
Assembly
GCA_900245975.1
Location
NW:11886742-11924122[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.69 4.5e+03 -3.8 1.3 94 109 175 190 166 213 0.49
2 4 0.073 4.7e+02 -0.6 1.2 78 110 466 505 429 535 0.54
3 4 0.41 2.6e+03 -3.0 1.9 79 107 753 781 745 798 0.51
4 4 3.5e-63 2.2e-59 200.0 0.4 24 221 917 1109 903 1111 0.94

Sequence Information

Coding Sequence
ATGTCCACATCCACCGCCACAACGAGTGTCATCACGTCCAACGAGCTCTCGTTGTCCGCCCACGGGcacgcccactcccacacacacaactcccACACGCACAACTCCCACTCGCACGGCCACTCgctgcaccagcaccagcacagccGCATCGGAGGAGGCCTAGGAATCGGAGTCCTCAGTGACGCCTCTCTATCGCCCATCCAGCagggcggaggaggaggaggaggcggcggcggcggaggtgcCAACAGCTCACCCCTGGCGCCCAACGGTGTACCCCTGCTGACCACCATGCACCGCTCCCCGGACAGTCCACAGCCGGAGCTGGCGACCATGACGAACGTCAACGTCCTCGACCTGCACACAGACTCCTCCAAGCTCTACGACAAGGAGGCGGTCTTCATCTACGAAACGCCCAAGGTGGTGATGCCCGCCGACGGTGCCACGGAAGATGGCCATGCAATCGATGCGCGGATCGCGGCCCAGCTGGGCACACAgcacgcccagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcaacagcaacagacggAGCACCAGCCGCTGGCCAAGATCGAGTTCGATGAGAACCAAATCATCCGCGTGGTGGGACCGaacggagagcagcagcagatcatcTCGCGAGAGATCATCAACGGAGAGCACCACATTCTGTCGCGCAACGAGGCCGGGGAGCACATCCTCACGCGCATCGTCAGCGATCCCTCGAAGCTGATGCCCAACGACAATGCGGTGGCCACGGCCATGTACAACCAGGCCCAGAAGATGAACAACGACCACCAGGGCGTCTACCAGACCTCGCCCCTGCCCCTGGACGCCTCCGTGCTGCACtacagcaacgacaacagcaacgtGATCAAAACGGAGGCAGACCTCTACGAGGACCACAAGAAGCATGCGGCCGGCGGTGGCTCCATCATCTACACCACCTCCGACCCCAACGGCGTCAATGTGAACGTGAAGCAGCTGCCCCACCTGGCCGTGCCGCAGAAGCTCGACCCGGACCTCTACCAGACGGACAAGCACATCGATCTGATCTACAACGACGGCAGCAAGACCGTCATCTACTCCACCACCGACCAGAAGGGTCTCGAGATCTACTCAGGCGGCGACATCGGCAGCCTCGTCTCCGACGGCCAAGTGGTGGTCCAGGCGGGCCTGCCCtatgccaccaccaccagtgcCACAGGCCAGCCCGTCTACATCGTGGCCGATGTCAGCGAGGACCATCTACAAAGTGGAAAGCTCAATGGCCAGACCACACCCATCGATGTCTCGGGCCTATCGCAGAATGAGATCCAAGGCTTTCTGCTCGGCTCACACCCCTCATCATCGGCCTCGGCCGTCAGCACCACTGGCGTTgtctccaccaccaccatctcgcagcaccaccagcagcagcaacagcagcagcaacagcagcagcagcagcagcagcagcaacagcagcagcagcatcccggCGACATTGTGAGTGCCGCAGGCGTGGGGAGCGCAGGCTCCATTGTCTCGTCGGCggtgcaacaacagcagcagcagcagcagcagcagctgataaCCATCAAAAGGGAGCCGGAGGATCTGCGCAAGGATCCGAAGAACGGTAACATTACCGGAGCGACGGCAGCGAACGGCGGCGCGGGTTCGGTCATAACGCAAAAGATCTTGCACGTGGATGCGTCGCCACCAGCCGACGAAGCTGAGATTAGCGAGATtagccacagacacagtccCAGCACACCCTGCACCACCAGaaccaacagctgcagcagtagTAGTCCTGCCACCGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTACCTACAGACCTCACATCCCAGCACGGCCAGCGGCgcgggaggaggaggcggcggcagcggcgtcgGTGGAGGCGGATCTGTTGGAGCCGGCGCAGGCTCCCTGCAGGCACAAAGCCCCAGCCCGGGGCCGTACATAACCGCCAACGACTATGGAATGTACACGGCCAGCCGACTGCCGCCCGGCCCCCCgcccaccaccgccaccaccttCATAACGGAGCCCTACTACCGGGAGTACTTTGCGCCGGACGGACAGGGCGGCTATGTGCCCGCCTCCACGCGCTCCATCTACGGCGACGTGGACGTTTCGGTGTCGCAGCCGGGCGGAGTGGTCACCTACGAGGGTCGCTTCACAGGCAACGCCCCCCCGCCCACCACCACGACACTGCTCACGAGCAGCGTCAGcgtgcaccaccagcagcaacaacagcagcagcagcaacagcagcaacaacaacagcaacagccccaacaccagcagcacctacaccaacagcagcagcaacagcaccaccatcCGCAGGACGGCAAGGGGGGCGGCAGCACGCCACTCTATGCCAAGGCCATAACGGCGGCGGGACTCACCGTCGACCTGCCCAGTCCCGACTCGGGCATCGGGACGGATGCCATCACGCCGCGGGATCAGACCAACATACAgcagTCCTTCGATTACACGGAACTGTGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTGTCCGTTAACAGCATCCAGCAGCGGACAGTGGTGCATGGCAGCCAGAACAGTCCCACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGCTCGCGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaaaaatATTCACAAATGTTGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCGTCACAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTATGGGATCACGCTGGAGTATGTGCACGATGCGGATAAGCCCATCAAGAATACGACGGTTAAGAGTGTGATCATGCTCATGTTCCGCGAGGAGAAGAGTCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCGCTCGAGAGCTCCGCCAAGATCAACATTGCGGTTCAGTGCCTGAGCACGGATTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACGCGCGATGAGGAGCGACGGGCCGCCAAGCGGAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCAGCGGAGGACATGGAGAAGGTAGGTCAGCCGGGCCTGACTGGCTTGACATTCATCCacacgaatacgaatacgcacacgaatacgaatacgaactcgaactcgaactgcAACTCCAACTCGAATTCGCCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGTGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGACCAGAACATAATGACCAGCACACCCATGACGGACTTTGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCAACCTCGGAGCGTGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACACCGCTGCATGTGGTTCCCCCCACCACAATTGGTCTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatttatcGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTTCTACTGCAATGAGGACATCTTCTTGCTGGAGGTGCAGCAGATCGAGGACGATTTGTACGACGTCACGCTGACGGAGCTGCCCAATCAGTAG
Protein Sequence
MSTSTATTSVITSNELSLSAHGHAHSHTHNSHTHNSHSHGHSLHQHQHSRIGGGLGIGVLSDASLSPIQQGGGGGGGGGGGGANSSPLAPNGVPLLTTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMPADGATEDGHAIDARIAAQLGTQHAQQQQQQQQQQQQQQQQQQQTEHQPLAKIEFDENQIIRVVGPNGEQQQIISREIINGEHHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKMNNDHQGVYQTSPLPLDASVLHYSNDNSNVIKTEADLYEDHKKHAAGGGSIIYTTSDPNGVNVNVKQLPHLAVPQKLDPDLYQTDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGGDIGSLVSDGQVVVQAGLPYATTTSATGQPVYIVADVSEDHLQSGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASAVSTTGVVSTTTISQHHQQQQQQQQQQQQQQQQQQQQQHPGDIVSAAGVGSAGSIVSSAVQQQQQQQQQQLITIKREPEDLRKDPKNGNITGATAANGGAGSVITQKILHVDASPPADEAEISEISHRHSPSTPCTTRTNSCSSSSPATELEMYATTGGTQIYLQTSHPSTASGAGGGGGGSGVGGGGSVGAGAGSLQAQSPSPGPYITANDYGMYTASRLPPGPPPTTATTFITEPYYREYFAPDGQGGYVPASTRSIYGDVDVSVSQPGGVVTYEGRFTGNAPPPTTTTLLTSSVSVHHQQQQQQQQQQQQQQQQQPQHQQHLHQQQQQQHHHPQDGKGGGSTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQPGLTGLTFIHTNTNTHTNTNTNSNSNCNSNSNSPLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00580456;
90% Identity
iTF_00574576;
80% Identity
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