Basic Information

Insect: Drosophila pseudoananassae
Gene Symbol: RREB1
Assembly: GCA_018153035.1
Location: JAECXR010000014.1:1313446-1319506[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0047 0.34 11.3 0.6 1 21 236 256 236 258 0.96

2 12 0.00027 0.019 15.2 0.2 1 23 268 290 268 290 0.98

3 12 1.7 1.2e+02 3.3 3.7 2 19 524 541 524 543 0.97

4 12 0.0068 0.48 10.8 0.1 1 23 688 710 688 710 0.97

5 12 2.8e-05 0.002 18.3 0.7 1 23 720 742 720 742 0.99

6 12 0.00067 0.048 14.0 2.0 1 23 748 771 748 771 0.97

7 12 0.0024 0.17 12.2 2.0 1 23 1040 1063 1040 1063 0.95

8 12 7e-05 0.005 17.0 0.3 2 23 1427 1448 1426 1448 0.97

9 12 0.12 8.3 6.9 6.3 1 23 1454 1477 1454 1477 0.97

10 12 1.4 96 3.6 2.1 1 23 1601 1624 1601 1624 0.91

11 12 0.0068 0.48 10.8 0.5 3 23 1691 1711 1689 1711 0.96

12 12 0.0052 0.37 11.2 5.7 1 23 1717 1739 1717 1739 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0047	0.34	11.3	0.6	1	21	236	256	236	258	0.96
2	12	0.00027	0.019	15.2	0.2	1	23	268	290	268	290	0.98
3	12	1.7	1.2e+02	3.3	3.7	2	19	524	541	524	543	0.97
4	12	0.0068	0.48	10.8	0.1	1	23	688	710	688	710	0.97
5	12	2.8e-05	0.002	18.3	0.7	1	23	720	742	720	742	0.99
6	12	0.00067	0.048	14.0	2.0	1	23	748	771	748	771	0.97
7	12	0.0024	0.17	12.2	2.0	1	23	1040	1063	1040	1063	0.95
8	12	7e-05	0.005	17.0	0.3	2	23	1427	1448	1426	1448	0.97
9	12	0.12	8.3	6.9	6.3	1	23	1454	1477	1454	1477	0.97
10	12	1.4	96	3.6	2.1	1	23	1601	1624	1601	1624	0.91
11	12	0.0068	0.48	10.8	0.5	3	23	1691	1711	1689	1711	0.96
12	12	0.0052	0.37	11.2	5.7	1	23	1717	1739	1717	1739	0.99

Sequence Information

Coding Sequence: ATGCTGGCAGCACAGCAGCAGCAGCAGCACAGTACCAACCCAAACACAACTACCACAGAGAACGAGATGGAGCGGCAGAGGCGGGACTCCACCACCTCGGAATCCTCGCTGGAGCACCTGGATTTGGGGCGCACGCCCAAAAAGCTCAGCGCCGTCAGCAGCGGCGGCAGCGGCAGTCTGGTGCTGCAGCCGACGTCAACGCCGCACGAAGTAGCGACGGCGACGTCGCGCAAACGTAAGCTGCGCCAGATCCAACATCACCATCAGGACCTACTGAGCGATGAGGACGAGGAGGAGGACGAAGCGGCATCAGCGGCTGGGGCCCGCCCCCACGGCCGCCAAAAGCAGCGACGCAACGCCTCGGCCTCGGCCAGCATCGTACTGGACGGCAGCGGCAGCGACGCCAGTTCACTGCGCAAGAAGTTCCGTTTGAATCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCGGTGGATCTTCGCCGCAAGGTGGCCTGTGCCTGTCCAGCGGCGAGTCCGGCATCGGGGCGGGGGACGAGCACATGAAGTACGTGTGCCCCATCTGCGAGGTGGTCAGTGCCACGCCCCACGAGTTCACCAATCACATTCGGTGCCACAACTACGCCAACGGGGATACCGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTCTCGTCCGCCTCATCCCTGGACAGACACGTGCTGGTGCACACCGGCGAGCGTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCTATGAGAGCGACGCCAGCTGCTCTACGGATGCCTCCAGTGGGCACAGCCGCAGTCGCAGCAGCTCCTCCCTCACCCACAACAACAACAACTCCCAGAAGGCCAACCACAACCACAAGGACATGGAGCTGGACCTGGAGCTGGAGGAGGAAGTGAAGAATCACCAGAACCGTCGCGGGCTCAAGACAACCATAAACAACAACGTCATCGAGAGCGAACACGAGGACGAGGAGGAGGAGCAGGATCACGACGATGTCGATGAGGAGACGGATGTGGCCATGCTGACATCCACCCCCGACGTGGCCACTCTGTTGGCCGGTGCCAGTGGCTCGAGAGCCGCCTCCCGCTGCCCCGCCTGCGGAGTTGGGGATTTCGAGACGCTGCCATCCTTGTGCGACCACCTGGACGCCCGGCATTCAAACATCCCGGCCAAGTGTCGCGATTGCGAGGTGATCTTCGCCAGCCACCGCCAGTTGCAGGCCCACTGCTGTCGCGGCGGAGTTGGACATCCTGTCGGAGTGGGTCTGCCGCCTCTTATGGGCGCCAGCAGCTCCCCGCTCCACGGCGACGACGATGCCGAGGATGAGGATGACGAGGACGCAGAGCGACGTCGTCTGGAGAAGCAGCGCCTGGCCGACCAGCGGGAGGACTTCTTCCAGCAGCTGTACCTCAAGGGCAAGACCTCCGGCGAACACCCGCCCTCGCCGATCAAGCACGAGCCGGCGGACAGCAAGGACCTGGCCGACATCCAGAGCATCCTGAACATGACCAGCTCCAGCTGCACCAGCAACTTCCTGCGCAACTTCGAGCAGTCGGTGAACACGCCCAGCTCCAGCCAGTACAGCCTGGACGGGCGCGACCAGGAGGAGGAGGCCCAGGATGCCTTCACCTCGGAGTTCCGGCGGATGAAGTTGCGCGGCGAGTTCCCCTGCAAGCTCTGCACCGCCGTATTCCCGAATCTGCGCGCCCTCAAGGGCCACAATCGTGTCCACCTGGGCGCCGTGGGTCCGACCGGGCCCTTCCGCTGCAACATGTGTCCCTACGCCATCTGTGACAAGGCCGCCCTGGTTCGGCACATGCGCACCCACAACGGGGATCGTCCCTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGAGGCACCTGCGGAACCGTCACGGCAAGACCAGCCGGGAGGAGGTGAAGCGCGCCATCATCTACCATCCTGCGGAGGACGCCGGCTGCGGCGATGACGGCAAGTCCCGTCTGGGCGAGGATCTCGACCTGAGCTTCCGCTCGATCAGTCCGACTCCCCCACCACCACCGCCGCCGCTCCCGGAAAGCAGCTCCCAGCTGAAGCACATGCTCCTGGGCGAGAACCAGGCAGCGAGTGGAGCTCCGGCTCCCAGCCCCCAACCTCCACTGAAGATCCAGGTCAAGAGTCTGGACCAGTTGGTGGACAAGAAGCCCAGCCAGGAGAAGAGTTCGCCCAGTGCCGCCCTGGACTTCAGCATGGACGTGCTGGATCTCAGCAAGAAGCCCTCCAGCGGATCGGCTGCCATCACCCCGACTCCCACACCGAATCCGGCTCCGCTGGCGCCTCCAGCGGGAGTGCCTGGTGCCCCGGACCTGGCCGCCGCCCTGGAGCAGCATCAGTTGCTCCTCGCCCAGCAGCAGCTCTTCGCCGGAGCTGCCGGCGATGCTGCCTCCCAGTATGTCCAGCAATTTTTCCGCAGCCTCATGCTGCAGTCCCAGACTCCGGGCTTCTCGTACCTCTATGGCGCCTTCATGGCCCCGCCGCCGCCGCAGACCAACTCGGAGAAGCCCCCACCGCTGGTGAGCCCGCCCACTCGTGGCCTGAATCCTCTGCCGATGGGCGGTGTGGGCGTGCCAGTGCCTCCAGGCGGACCCGTCAAGATGGTCATCAAAAACGGCGTCCTGATGCCGAAGCAGAAGCAGCGCCGCTACCGCACCGAGCGACCCTTCGCATGCGAGCACTGCTCCGCCCGCTTCACCCTCCGCAGCAACATGGAGCGCCACGTGAAGCAGCAGCACCCCCAGTTCTATGCCCAGCGCCAGAGGAGCGGCCACCACGTGATGCGCGGACGTGGCGCCTCCAGTGCCGCTGCCGCTGCCGCCGCCGCAGCTGCTGCCGCCGGTATGGGTGTTCCCGGCGTGTCATCCGCTGGAGTCGGCTCCGGATCTCATCACCATCCCGGCCATGGCCACGGACACGGACATGCTCCCATCTCGGAGCAGGTGAAGTACGCCATTCTGGCCCAGCAGCTAAAGGCTCACAAGAACACGGATCTTCTGCAGCAGGCCCTGGCCCACGGATCAAGCAGCGTGTCCGGCAATCCTCTTCTGCCCTTCGGCTATCCACTGGCCACTCCGCTGCCCAGCTCTGCGCTGCACAATGGCGGTAGCGGGCAGCTGGGAAACGGGGTGCCCATGGTCTCCATGGACGACGATGAGCCCAAGCTAATCATTGACGAGGATGAGAACGACAACGATGTGGAGGAAGTGGAGGACTTCGAGGAAGACGAAGAAGAGGAGGAGGAGGACGAGCCTGAAGATGAGCCCGAGATCATTGCCGACGAGGAGCCACTCCCACGCGATGAGGAGGAGGACCAGCCGGAGGAGAAGATGGAGGAGCTGGAACTTCCCAAGCCTCTCTTGGAGCAACTGCCCAACGACGCGGCCCAGAAGACCGCCGAGACCATCCTGGAGCAGGCCATCAAGGCGGGCAAGCCCGTAAGCACGCCCCCACCTCCGCCAAAGGAGCAGCAACTGGAGCAGATCGCACCACCAGCTCCCAGCTCGTTGAAGACCATGATTGCCCAGGCCGAGTCCGTGGCCAAGTCCCTCAAGGAGGTGGCCAGTTCGCCGTTCAAGGACGAGTCGCAGGACCTAGTGCCTGTGGCCAAGCTGGTGGACAATGCCACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGGCCCAGCGACGTGGCCAACCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCCGGTAGCGCCAGCGAGAGCAACAACAGCGGCACCGAGGACGTCACCAGCAGCTCCTCCGGCAGCGAGCCGAAGAAGAAGTCCGCCTACAGCCTGGCCCCCAACAGGGTGTCCTGCCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGCCACATCCTCACCCACACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCCCTACTCTTCACCACCAAGAGCAACTGCGACCGCCACTTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCCGTCTACGTGCCCACGGAGGACGTCAGCGAGCCGATTCCTGTGCCCAAGTCCGTCGAGGAGATCGAGCTGGAGGAGCAGCGCCGTCGCCAGGAGGCCGAGCGCGAGCGTGAACGCGAACTGGAGCGTGCCCGAGAGCGGGAGCTTGAGCGGGAACGTGAGATGGAGCTGGAGCGCGAGCGTGAGCTGGCCGAGAAGGAGAAGGAGAAGGAGCGTGAACGCCAGCAGCTCATCCAGAAGTTGGCTGCCCAGATGGCTGCCGCCGCCGCCGTGGCTGCCGCTACCCCCGGAGCTCCGGGAGTCGCTGCACCCGGCAGTCTGGACGCACAGGCTGGCGGAGATCTGCCCTACAAGTGCCACCTGTGCGAGGGCTCCTTCGCCGACCGGCTGCAGTGCCTCGAACACATCAAGCAGGCCCATGCCCACGAGTTCGCCCTGCTCCTCGCCAAGGGCGCCATCGAAAACGAGTCCGTGCTGGGCGAGTCGGCCTCGGGGAATCCCAACCAGCCTCCGCCATCCAGCCAGCAGCCGCACTCCGACGATGAGGGCACCAACGGCGTGATCGGTGGTGCCGGAGGACGTGGCAAGTACCCGGACTACAGCAACCGTAAGGTGATCTGCGCCTTCTGTGTGCGCCGCTTCTGGTCCACCGAGGATCTGCGTCGTCACATGCGCACCCACTCCGGGGAGCGTCCGTTCCAGTGCGAGACCTGCCTCCGGAAGTTCACCCTCAAGCACAGCATGCTCCGGCACATGAAGAAGCACAGTGGACGCGCCCACAACGGCGACGCTCCCGGCTCCGACTGCTCCGACGACGAGCAGGTGAGCAGCAGCCCTCCCGGCACCCCGGCCCCACCCACGGCCACCACCGCCGCTACCAACAACAACAACAGCTGCCACACCAACAACAACAACACAGTGAGCGCCAAGCTGGGCCTGAAGCTGCCCAAGCTGCACGAGCTTTTGGACAAGGCGACGGAGTGGCGGGCCAGCCGGCTGGCGGGTGAGCACAAGGAGAACCTGGGCGAGGCCAGCGCCCCCTCGGGCTCCAGCACAGATCTGATCGGTAACCTCCTCGGGATCAGCGATCAGGGAATCCTCAACAAGCTGCTCTCCTCCGCCGACGAGGCGGCCAAGCTCCTCGGCGTAGACAACAAATAA
Protein Sequence: MLAAQQQQQHSTNPNTTTTENEMERQRRDSTTSESSLEHLDLGRTPKKLSAVSSGGSGSLVLQPTSTPHEVATATSRKRKLRQIQHHHQDLLSDEDEEEDEAASAAGARPHGRQKQRRNASASASIVLDGSGSDASSLRKKFRLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGSSPQGGLCLSSGESGIGAGDEHMKYVCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYESDASCSTDASSGHSRSRSSSSLTHNNNNSQKANHNHKDMELDLELEEEVKNHQNRRGLKTTINNNVIESEHEDEEEEQDHDDVDEETDVAMLTSTPDVATLLAGASGSRAASRCPACGVGDFETLPSLCDHLDARHSNIPAKCRDCEVIFASHRQLQAHCCRGGVGHPVGVGLPPLMGASSSPLHGDDDAEDEDDEDAERRRLEKQRLADQREDFFQQLYLKGKTSGEHPPSPIKHEPADSKDLADIQSILNMTSSSCTSNFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPTGPFRCNMCPYAICDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIIYHPAEDAGCGDDGKSRLGEDLDLSFRSISPTPPPPPPPLPESSSQLKHMLLGENQAASGAPAPSPQPPLKIQVKSLDQLVDKKPSQEKSSPSAALDFSMDVLDLSKKPSSGSAAITPTPTPNPAPLAPPAGVPGAPDLAAALEQHQLLLAQQQLFAGAAGDAASQYVQQFFRSLMLQSQTPGFSYLYGAFMAPPPPQTNSEKPPPLVSPPTRGLNPLPMGGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAAAAAAAAAAAAGMGVPGVSSAGVGSGSHHHPGHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVSGNPLLPFGYPLATPLPSSALHNGGSGQLGNGVPMVSMDDDEPKLIIDEDENDNDVEEVEDFEEDEEEEEEDEPEDEPEIIADEEPLPRDEEEDQPEEKMEELELPKPLLEQLPNDAAQKTAETILEQAIKAGKPVSTPPPPPKEQQLEQIAPPAPSSLKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSGSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERARERELEREREMELERERELAEKEKEKERERQQLIQKLAAQMAAAAAVAAATPGAPGVAAPGSLDAQAGGDLPYKCHLCEGSFADRLQCLEHIKQAHAHEFALLLAKGAIENESVLGESASGNPNQPPPSSQQPHSDDEGTNGVIGGAGGRGKYPDYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCETCLRKFTLKHSMLRHMKKHSGRAHNGDAPGSDCSDDEQVSSSPPGTPAPPTATTAATNNNNSCHTNNNNTVSAKLGLKLPKLHELLDKATEWRASRLAGEHKENLGEASAPSGSSTDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00504177;
90% Identity: iTF_00488226; iTF_00539145; iTF_00476138; iTF_00566296;
80% Identity: -