Dper002151.1
Basic Information
- Insect
- Drosophila persimilis
- Gene Symbol
- Hr39
- Assembly
- GCA_003286085.2
- Location
- NW:9562408-9601030[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.34 1.6e+03 -2.2 0.7 140 166 25 53 3 85 0.50 2 4 3 1.4e+04 -8.8 9.8 77 153 205 292 153 340 0.45 3 4 3 1.4e+04 -7.0 6.2 60 96 280 316 254 400 0.53 4 4 6.4e-105 3e-101 339.5 7.6 1 408 476 860 476 860 0.84
Sequence Information
- Coding Sequence
- ATGCCGAATATGTCTAGCATTAAGGCCGAGCAGCAGAGTGCCCCAATCGGGGGCACAGGCAGCTACCAACTACCCGTGAACATgtgcaccagcagcagcaacagcagcgcgatgacgatgacgacgacgacaggATCGGCGACGCCGTCGCGTCACAATGTGTCCGTGACGAACATTAAATGTGAATTAGAGGAGCTTCCCACGCCGAATGGCAATCTGGTGCCGGTCATCGCCAACTATAATCATGGCAGCCTGAGGATACCCCTCAGTGGGCAGCCACACACCGCGGAGGAAGAGTCGGACTCCGAGGCGGAGCTCACGAATATCGAGAACCTGAAGGTGCGCCGGCGGGCGGCGGATAAGAACGGACCCCGACCCATGTCCTGGGAGGGGGAACTGAGCGAACCCGAGGAGAACGGAGGCAGCTGTGGCGGAGGAGGGGCAGAGCTGATGGAAACGGAGACGGTGATCAAGAGTGAGGTGTGCAGCACGTCGACGCCCATTCAGGCGGCGTCCACCACCTGCCCCACGATGCAGCCGATCAAAACGGAGCTGGAGAACATTGCCGGAGAGCTGCAGCATCATCCGCGAAGCAACGCCTATCCGGTGTCCAGCTGCAACGGTCCCGCGAAACTGAAGCTGGCGCCCACCCAGAGCGATCCGATCAATCTCAAGTATGAGCCCCCCCTGGGGGACAACAACTCCCCGCTGCTGACGACCCGCAACAAGTCGAACAGTGGGGGACACCTGCCGCTGCCAGCGAATCCCAGTCCCGACTCTGCCATACATTCCGTCTACACCCACAGCTCACCGTCGCAGTCGCCGCTGACGTCGCGGCATGCACCGTACACGCCGTCGCTGAGTCGCAACAACAGCGACGCCTCGCACAGCAGttgctacagctacagctcgGAGTTCAGTCCGACGCACTCGCCGATTCAGGCGCGGCATGCCCCACCGGCGGGATCCATGTATCCCGGCAGCGGATCCGCGGCAGGAAACGGAGGAGCCGGAAGCAGCTACGGGAACGGCGTGCATCATCATGGTATGCTGTACAGGCCGCTCAAAGCGGAGGCCTCCTCAACGGGTGGATCGAGCCAGGAGTCGGCACAAAATCTCAGCATGGACTCGGCTTCCAGTGCCATGGATCCGCTAGGATCGGGCTCGCTGCCCGCCTCCCCGGCCGGGATCTCCCGCCAGCAGCTGATCAACTCCCCCTGCCCGATCTGTGGGGACAAGATCAGTGGCTTCCACTATGGCATCTTCTCCTGCGAGTCCTGCAAGGGTTTCTTCAAGCGCACCGTCCAGAATCGCAAGAACTACGTGTGCGTCCGTGGGGGACCCTGCCAGGTGAGCATTTCCACGCGCAAAAAGTGCCCTGCCTGTCGGTTCGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATACGCGAGGATCGCACCCGTGGCGGTCGCTCCACCTATCAATGCTCCTACACGCTGCCCAATTCGATGTTGAGTCCGCTCTTGAGTCCGGATCAGGCGGTGGCAGCCGCTGCGGTAGCTTCAGTGGCCAATcatcagcaccagcaccagcagcatcatcagcaccagcatcaacagcagagactccagcagcagatgAATGGCTTTTCAGGGTCGACATCCCTGCCGGCGAGTCCCAGTCTGGGAGGAGCATCCATCAAAACAGAGGAATCCGAGGCGAAGACATTAAGAGCGAGCAGTATTCCAACGCTATTGCAGGAAATCATGGATGTTGAACATCTTTGGCAGTACACCGATGCAGAGCTGGCCCGCATCAATCAGCCATTGTCCGCCTTTGCCTCTGGTGGCAgctcctcatcatcatcgtcgtcgtctgccGCCTCAACGGCACACCAGaaccaccaacagcagcagcagcagcaacagccgcatcagcaccagcagcagcaattgACCAACCCACTGCTGGCCAGTGCCGGTCTCTCGTCCAACGGGGAGAATGCCAATCCCGATCTGATTGCTCATCTCTGCAATGTGGCCGATCATCGTCTCTACAAGATTGTCAAATGGTGCAAGAGTCTGCCGCTCTTTAAGAACATTTCGATCGATGATCAAATCTGTTTGCTGATCAATTCGTGGTGCGAACTGTTGCTCTTCTCCTGCTGTTTCCGTTCGATTGATACGCCCGGGGAGATAAAGATGTCCCAAGGCAGAAAGATAACACTATCACAGGCCAAAACGAATGGGCTTCAGACCTGCATCGAACGCATGCTCAATCTGACGGACCATTTGAGGCGTCTGCGCGTGGACCGCTACGAATATGTTGCCATGAAGGTGATAGTGCTGCTGCAGTCAGACACCTCAGAGCTGCATGAGGCGGTGAAAGTGCGGGAGTGCCAGGAGAAGGCATTGCAGGGCCTGCAGGCCTATACGCTGGCCCACTATCCGGATACGCCTTCCAAGTTTGgagagctgctgctgcgtatACCCGACCTGCAGCGCACATGTCAGCTGGGCAAGGAAATGCTGACGATCAAGACACGCGATGGAGCTGACTTCAATTTGCTGATGGAGCTGTTGCGCGGAGAACATTGA
- Protein Sequence
- MPNMSSIKAEQQSAPIGGTGSYQLPVNMCTSSSNSSAMTMTTTTGSATPSRHNVSVTNIKCELEELPTPNGNLVPVIANYNHGSLRIPLSGQPHTAEEESDSEAELTNIENLKVRRRAADKNGPRPMSWEGELSEPEENGGSCGGGGAELMETETVIKSEVCSTSTPIQAASTTCPTMQPIKTELENIAGELQHHPRSNAYPVSSCNGPAKLKLAPTQSDPINLKYEPPLGDNNSPLLTTRNKSNSGGHLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGSMYPGSGSAAGNGGAGSSYGNGVHHHGMLYRPLKAEASSTGGSSQESAQNLSMDSASSAMDPLGSGSLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAVAAAAVASVANHQHQHQQHHQHQHQQQRLQQQMNGFSGSTSLPASPSLGGASIKTEESEAKTLRASSIPTLLQEIMDVEHLWQYTDAELARINQPLSAFASGGSSSSSSSSSAASTAHQNHQQQQQQQQPHQHQQQQLTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLSQAKTNGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELHEAVKVRECQEKALQGLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRDGADFNLLMELLRGEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00484464;
- 90% Identity
- iTF_00473807;
- 80% Identity
- iTF_00574865;