Dper000868.1
Basic Information
- Insect
- Drosophila persimilis
- Gene Symbol
- lrrfip2_1
- Assembly
- GCA_003286085.2
- Location
- NW:353603-443233[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-117 4.8e-113 377.1 25.6 1 299 30 321 30 322 0.98 2 2 0.053 7.4e+02 -1.2 3.4 151 171 351 371 323 395 0.44
Sequence Information
- Coding Sequence
- ATGGAAAGCACAAGCGCCACAGGTCGACGACGAAACAATACACGAGTGAATGCAGAGGACAACGCGCTAGATCAAATCACAAAAGAGGCCGAAGCACGCCTTGCCGCACGCCGCCAAGCCCGTGCTGAAGCTCGCGAGATACGTATGAGAGAGCTTGAACGCCAACAAAAAGAACAGGAACAAAATGCTGATCGTGTATTTGATATGCAAAACTCGAGTACCAGTTTCGGCAGTGACTCAATCTCAGCACATCCTGCACGTCTCATTCTTGGCGGACTATTAAATATTACTCGAGCCACGGCATCCCGACGCAGTAGTGAAGATTCTTTGGAGGATGAAGGTAGAAGCTTACGTGACTTCAAATATGAGCTTAAAGATGTCGAAGAACGTTTTCGGAAAGCTATGATAACAAATGCACAGCTTGACAATGATCGTGCCTCACAAACGTACGAAGTAAAATTGCTTAAGGACAAATGTGAAACTATGCAAGAGGCATTCGCACAGCTGCAGCGCGAGTTTAAAGAGAAAACGCGTGACTGCAACGCTATTAAGCGAAACTTAGATCGTACCTCTCTTGAGCTTAAATTAGTTCAAGGTCAGCTTAGCGAGCGAGATTCATTGATTGCAGAACAGGGTCTTCTGATTGTTGCAATTGAAAATGCTGATGGCAGTGATGCCAAGCGAGCTCTAGTCAGTGTTGAAAATGCTAATGTGTTGGCATCCGTTCAGGGTTCTTTAGATGTAAGAATACAAAAATTGTGCGATGAAAAACAACAATTACTATCTGAAGTACAGAAGCTGCAAAAAATGATTAAAGAGTATAAAAGCGAAGGAATTGTAAGGCGTGGCAGTTCGTCACCGTGTCCCTTTGGTAAAGACAACGATTATGAGGCTCAAAGGGAAGCAAACAAAATCATATCAGACTATAAGTATAAGTTACAAAAGGCTGAACAAGAAATGGCTAATCTACAATCGAGCTTAGCACGTTCAGAGACGCAAGTTATTCGATATAAAAGCACCGCAGAAGCCGCTGAGAAGTCGGAATCAGAATTAAAATTGGAACGCCGCAAGCTACAACGTGAGCACCGTGAAGttttggaaaaactggaagAAGCCGAGACGGCTAATAACCATTTATTGAAACGACTTGACAAACTAAAAAATGCGAAAAGTGCCATTCTTAAGGACCTATGA
- Protein Sequence
- MESTSATGRRRNNTRVNAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKEQEQNADRVFDMQNSSTSFGSDSISAHPARLILGGLLNITRATASRRSSEDSLEDEGRSLRDFKYELKDVEERFRKAMITNAQLDNDRASQTYEVKLLKDKCETMQEAFAQLQREFKEKTRDCNAIKRNLDRTSLELKLVQGQLSERDSLIAEQGLLIVAIENADGSDAKRALVSVENANVLASVQGSLDVRIQKLCDEKQQLLSEVQKLQKMIKEYKSEGIVRRGSSSPCPFGKDNDYEAQREANKIISDYKYKLQKAEQEMANLQSSLARSETQVIRYKSTAEAAEKSESELKLERRKLQREHREVLEKLEEAETANNHLLKRLDKLKNAKSAILKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00336724;
- 90% Identity
- iTF_00514877;
- 80% Identity
- -