Dper007230.1
Basic Information
- Insect
- Drosophila persimilis
- Gene Symbol
- bab2
- Assembly
- GCA_003286085.2
- Location
- NW:1437811-1467517[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-17 6e-14 51.1 0.0 1 43 651 694 651 696 0.95
Sequence Information
- Coding Sequence
- ATGGACATGACCAAGCAGATAATGGACTTTGAAATAAAGTCAGAGAGCGGCGACTGCGAGGCCAACGACTACACAATGGCCACGGCCACAGAGGAGCCCAAGGGGGCGCCGGAGGCAGCCACCCAGAACGACGGGGACACCAAGTCCTCCTCccatgaggaggaggaggcagccACAGGGACACAGGCCACAGCCACTGGCCCTGCCACAGAGAAGGCTGCGGCCGATATGGACGATGCGGACGAGGAGGCAGCGGAACCAAAGCAAAATCTGATCAAAGATCCACCATTGACACCGCCACCGAGGCCCCTGACCTCCAGCGAAGTGGTGGGACTGCGGGATCCCGACGATCCCGAGCTGCGCCTCCAACTGGAGGCAAAGAAGTCGCGATCGCTGCCGGTGTCGCCACAGCCGCAGGCCAGCCACAAGCTGGCGGCAGCCGCACTCTTCGAATTCGGACAGACATCGCCGGGTCGCGGATCGGGGGAGCGGACTCCCGTGAAGGCGATCAAGCCCGACCAGAAGGTGGCGCCCGCCAGGCGGCGACTGCCGCCCGTGAGCGGAGGCGCCACGGACAACCAGCAGTTCTGCCTGCGGTGGAACAACTACCAGTCGAATCTGACGAACGTCTTCGACGAGCTGCTGCAGAGCGAGTCCTTCGTGGACGTGACCCTCTCCTGCGAGGGGCAGTCGATCAAGGCCCACAAAATGGTGCTCTCCGCCTGTTCGCCGTACTTCCAGGCCCTGTTCTACGACAATCCCTGCCAGCATCCGATCATCATCATGCGGGATGTCCACTGGTCGGACCTCAAGGCCCTCGTCGAGTTCATGTACAAGGGGGAGATCAACGTGTGCCAGGACCAGATCAATCCTCTGCTGAAGGTCGCCGAGACCCTGAAGATCCGCGGCCTGGCCGAGGTGAGTGCCGGCGCCAGTCGCGACGGCGCCTCCGCGCACCCCATGCTCCCCGATCAGCGGATGTCCGTCTACGGGGAGGACGaagaggaggacgaggagctGGCGGCCGCCATCTTGCGGCAGGATCACGAGGACCCCGAGCCGAAGCGGGCCCGACTCATGGCGGACACCGCCCTGGACCTCAACCAGCGGCAGAGGAAGCGCTCGCGGGACGGCAACTATGCCACGCCCAGTCCGCTGCATGGCGAGACCCTCCGCCCCGACGTGGAGTCCGAGGCGTCGCCGCGGACGGCCGTCACGCCCAGCGGCCAGAGCCAGCCCACATCGACGATCGTGAGGAATCCCTTCGCCTCCCCGAACCCCCAGTCGCTGCAGGCGCACCTCCTCACGGGCACAGGCACCTCGTCCTCGGCCTCGAGCAGCAGCTCCGGAggcacctcctcctccacgGTGGGAACGGCCGCCGTGGGcacatcCAACGGCAGCTCGGCCGGAGCCCTGCTGCACTCGCCCACAGGCGGGGGATCGTCGGGCGGATCGCAGTCCTCGCTGCCCCCGCACATGGCCGCCGCAGTGCAGGCCCCACCACCGGTCATGCATCACCatgcggcggcggcagccGCCCAACAGCTGGCGGCCCAGCACCAATTGGCCCACTCGCATGCGATGGCCAGCGCCCTGGCGGCCGCTGCAGCGGGCGGCAATGGAGGCGGCGCCGCCGCTGCCCCGGCCAGCGGTGCGGTGGGGGGCTCGGTGCCCTCTGCCTCGTCGGTGGGTTCGTCGCATCACGATGACATGGAAATCAAGCCGGAAATTGCCGAAATGATACGCGAAGAAGAGAGGGCAAAAATGATCGAAAGCGGCGGCCATGGCGGCTGGATGggcgctgctgccgccgcaaCAGGCGCTTCTGTGGCGGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAATGCTGGAACACCAACCAGCAGAATCTCGTGCAGCAGCTGCGCTTCCGCGAACGCGGACCCCTGAAGTCGTGGCGCCCCGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTCAAGGAGGGGCTGTCGCTGTCGCAGGCGGCCCGCAAGTTCGACATCCCGTACCCGACGTTCGTGCTGTACGCGAATCGGGTGCACAACATGCTGGGGCCCTCCCTCGACGGCGGCACTGATCCGCGGCCCAAGGCCAGGGGCCGGCCGCAGCGCATCCTCCTGGGCATGTGGCCCGAGGAGCTCATCCGCAGTGTCATCAAGGCGGTCGTCTTCAGGGACTATCGCGAGATCAAGGAGGACATGGGGGCACATCAGTACGCGAATGGACAGGCGCATGGCACCTACATCGGCGGCGGCACCACTTCCAATGGGTATCACAGTGCCGCAGCCGCCAAGATGGCCGCACAGAACGCCGCCTTGGCCCCGCCCGATGCCAGCAGTCCGCTGAGCACCATGACAGAGTCGCTGCGCCGCCAGATCctgtcgcagcagcagcaggcggcccagcaccagcagcaccagcagcaggcgcCGCACATGTACAAGTCGCCGGCCTACTTGCAGCGCTCGGAGATCGAGGACCAGGTCTCGGCGGCAGCGGCcgtggcagcagcggcagccaagcATCAGCagagcggcggcggcggcggcggcggtggcggcggccgGGGATCCGAGAATCTGCCCGATCTGACGGCCCTGGGGCTGATGGGGCTGCCGGGCCTGAACGTCCTGCCGTCGCGCGGTGCCGGCGGCAACgggggcggtggcggcggAGCGGCGGCTCCCTCGAGTGCCGCCAGCTATGCGCGGGAGCTGACGCGCGAGCGGGAGCGGGATCGGGAGCTCAAGGAGGCCATGCAGGCGCGTCAGTACGGCAACCAGTCGcgcggcggcagcggtggcagcaACTCCTCCGCCAAGGCACAGTCGAATCGTCCTGGCGCCGCCTCCCCGTACTCCTCGCACTATgaacagcaTCCGAATTACGCGTACAACAAGCGCTTCCTGGAGAGCCTACCGGCGGGCATTGACTTCGAGGCCATTGCGAACGGCCTGCTCCAGAAGTCGGTGCAGGCCCAGAACAAGAGTCCACGCTTCGAGGACTTCTTTCCGGGGCCAGGGGGGCCGCAGGACATGAGCGAGCTCTTTGTCAATTCCgatgcggcggcggcggcggcggcagcagcagcggcagccgcgGCCTATGCCCCCGTCCGCGAGTCCCCCCTGATGAAGATCAAgctcgagcagcagcagcatgccACAGAGCTGCCGCACGAGGATTGA
- Protein Sequence
- MDMTKQIMDFEIKSESGDCEANDYTMATATEEPKGAPEAATQNDGDTKSSSHEEEEAATGTQATATGPATEKAAADMDDADEEAAEPKQNLIKDPPLTPPPRPLTSSEVVGLRDPDDPELRLQLEAKKSRSLPVSPQPQASHKLAAAALFEFGQTSPGRGSGERTPVKAIKPDQKVAPARRRLPPVSGGATDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVHWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGASRDGASAHPMLPDQRMSVYGEDEEEDEELAAAILRQDHEDPEPKRARLMADTALDLNQRQRKRSRDGNYATPSPLHGETLRPDVESEASPRTAVTPSGQSQPTSTIVRNPFASPNPQSLQAHLLTGTGTSSSASSSSSGGTSSSTVGTAAVGTSNGSSAGALLHSPTGGGSSGGSQSSLPPHMAAAVQAPPPVMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGGNGGGAAAAPASGAVGGSVPSASSVGSSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHGTYIGGGTTSNGYHSAAAAKMAAQNAALAPPDASSPLSTMTESLRRQILSQQQQAAQHQQHQQQAPHMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQSGGGGGGGGGGRGSENLPDLTALGLMGLPGLNVLPSRGAGGNGGGGGGAAAPSSAASYARELTRERERDRELKEAMQARQYGNQSRGGSGGSNSSAKAQSNRPGAASPYSSHYEQHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVQAQNKSPRFEDFFPGPGGPQDMSELFVNSDAAAAAAAAAAAAAAYAPVRESPLMKIKLEQQQHATELPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00574884; iTF_00563826; iTF_00563978; iTF_00480924; iTF_00480788; iTF_00514815; iTF_00514955; iTF_00601120; iTF_00600980;
- 90% Identity
- iTF_00574884;
- 80% Identity
- iTF_00574884;