Dath004517.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila athabasca
Gene Symbol
bab2
Assembly
GCA_008121215.1
Location
CM017796.1:60305765-60336417[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-17 6.9e-14 51.0 0.0 1 43 708 751 708 753 0.95

Sequence Information

Coding Sequence
atggACATGACCAAACAGATTATGGACTTTGAAATAAAGTCAGAGAGCGGCGACTGTGAGGCCAGCGACTACACAATGGCCCCCGCCACAGAGGACCCAAAGGGGGCGCCagagccacccacccacaatgAAGGGGAATCGCCCGAAATGGACACCAAATCCTCCACCATCGAAGAGGAGGAACACAGCGCAGAGGCAGCcgcaggcagaggcaaaggcacagccattgccacagccacagagaagGCAGCGCCCACAGATGTCGATGAAGATGCAGCGGAACCAAAGCAAAATCTGATCAAAGATCCACCATTGACACCGCCACCGAGGCCCTTGACCTCCAGCGAAGTGGTGGGCCTCCGGGATCCCGACGATCCCGAGCTGTGCCTCCAATTGGAGGCAAAGAAGTCCCGCTCGCTGCCCGTGTCGCCACAGCCGCAGGCCAGCCACAAGCTTGCGGCAGCGGCACTCTTCGAATTTGGACAGACATCGCCTGGTCGCGGATCGGTGGATCGGACACCCGTGAAGTCCATCAAACCCGACCAGAAGGTGGCCCCCGTCAGGAGGCGACTGCCCCCCGTCAATGGTGGCGCCACGGACAACCAGCAGTTCTGCCTGAGGTGGAACAACTACCAGTCCAATCTGACGAACGTCTTCGACGAGCTCCTTCAGAGCGAGTCCTTTGTGGATGTGACCCTCTCCTGCGAGGGGCAGTCCATCAAGGCCCACAAAATGGTCCTCTCCGCCTGCTCGCCGTACTTTCAGGCCCTGTTCTACGACAACCCCTGCCAGCATCCGATCATCATCATGCGGGATGTCCACTGGTCGGACCTCAAGGCCCTCGTCGAGTTCATGTACAAGGGCGAGATCAATGTGTGCCAGGATCAGATCAATCCCCTCCTAAAGGTCGCCGAAACCCTGAAGATCCGCGGCCTCGCCGAAGTGAGTGCCGGCGCCAGTCGCGATGGCGCCTCTGCGCATCCCATGCTCCCGGATCAGCGGATGTCCGTCTACggggaggacgaggaggaggatgaggagctgGCAGCCGCCATCTTGCGGCAGGATCATGAGGATCCCGAGCCCAAGAGAGCCCGACTCATGGCGGACACCGCCCTGGACCTCAATCAGCGGCAGAGGAAACGGTCGCGAGATGGAAACTATGCCACGCCCAGTCCATCGCATGTCGAGGCCCTCCGCCCCGATGTGGAGTCCGAAGCGTCGCCTCGAACGGCCGTCACGCCCAGTGGCCAGAGCCAGCCCACATCCACGATCGTGAGGAATCCGTTTGCCTCCCCAAATCCCCAGTCGCTGCAGGCGCACCTCCTCTCGGGCACAGGCACCTCGTCCTCCGCCTCGAGCAGCAGCTCCGGAGGaacctcctcctccacagTAGGAACGGCCGCCGTGGGCACATCTTCGTCGTCGGCGGCATCCTCCTCATCGGCGGGCACGTACCGCACCGCGGCACGCAGCTGCTCACCGCCAccccaccaccagcaccagcaccaccatcCCGCGGGCAGCAACGGAAGCTCGGCCGCAGCCCTGCTCCACTCGCCCACTGGCGGTGGATCGTCGGGCGGGGCACAGTCCTCGCTGCCACCACACATGGCCGCCGCAGTGGCCGCAGCCGCACATcatgccgctgccgctgtgcCACAGCAGGCCCCACCACCGGCCATGCATCATCatgcggcggcagcagccgcCCAACAGTTGGCCGCCCAGCACCAACTGGCGCACTCGCATGCGATGGCCAGCGCCTTggcagccgctgcagcgggCGGCAATGGAGGTGGCGCCGCCGCTGCCCCAGCCAGTGGTGCGGTGGGGGGAGCCGTTCCCTCTGCCTCATCGGTGGGATCATCGCATCACGATGACATGGAAATCAAGCCGGAAATTGCCGAAATGATACGCGAAGAAGAGAGGGCAAAAATGATCGAAAGCGGCGGCCATGGCGGCTGGATGGGCGCTGCTGCCGCGGCAACAGGCGCTTCTGTGGCGGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAGAAATGCTGGAACACCAACCAGCAGAATCTCGTGCAGCAGTTGCGCTTCCGCGAACGCGGACCCTTGAAGTCGTGGCGCCCCGAGGCCATGGCCGAGGCCATCTTCAGCGTCCTCAAGGAGGGGCTCTCCCTCTCGCAGGCGGCCCGCAAGTTCGACATCCCCTATCCCACGTTCGTGCTGTACGCCAATCGGGTGCACAACATGCTGGGGCCCTCCCTCGATGGCGGCACTGATCCCCGGCCCAAGGCCAGGGGCCGGCCACAGCGCATCCTCCTGGGAATGTGGCCCGAGGAGCTCATCCGCAGTGTCATCAAGGCGGTGGTCTTCAGGGACTATCGCGAGATCAAGGAGGACATGGGGGCACATCAGTACGCCAATGGACAGGCGCATGGCACCTACATTGGCGGTGGCACCACTTCCAACGGGTATCACAGTGCCGCTGCCGCCAAGATGGCCGCACAGAATGCCGCCCTGGCCCCGCCCGATGCCAGCAGTCCCCTCAGCACCATGACCGAGTCCTTGCGCAGACAGATCctctcgcagcagcagcaggcggcgcagcatcagcagcaccaacagcaggcGCCGCACATGTACAAGTCGCCGGCCTACTTGCAACGTTCGGAGATCGAGGATCAGGTctcggcggcagcggctgtggcagcagcggcagccaagCACCAGCacagcggcggtggcggcggcggtggcagggGATCCGAGAATCTGCCCGATCTGACGGCCTTGGGGCTGATGGGGCTCCCGGGCCTGAATGTCCTGCCGTCGCGTGGGGCCGGCGGCaatggcggcggtggcggtggtgcgGCAGCTCCGTCGAGTGCCGCCAGCTATGCGCGAGAGCTGACACGCGAGCGGGAGAGGGATCGGGAGCTCAAGGAAGCGATGCAGGCGCGTCAGTACGGGAACCAGTCccgcggcggcggcagcaatTCCTCCGCCAAGGCCCAGTCGAATCGCCCTGGAGCCGCCTCCCCGTACTCCTCGCACTAtgcgaagcagcagcagcagcaacagcagcaacagcagcagcagcagcactcgaagcagcaggagcagcatccGAACTACGCGTACAACAAGCGCTTCCTGGAGAGTCTCCCGGCGGGCATTGACTTCGAGGCCATTGCCAATGGCCTGCTCCAGAAATCGGTGCAGGCCCAGAACAAGAGTCCTCGCTTCGAAGACTTCTTTCCGGGGCCCGGGGGCCCGCAGGATATGAGCGAACTGTTTGTCAATTCCGacgcggcggcggcggcagcagcagcggcagcagccgccgcataTGCCCCCGTCCGCGAGTCACCATTGATGAAGATCaagctggagcagcagcagcatgccaCAGAGCTGCCGCATGAGGATTGA
Protein Sequence
MDMTKQIMDFEIKSESGDCEASDYTMAPATEDPKGAPEPPTHNEGESPEMDTKSSTIEEEEHSAEAAAGRGKGTAIATATEKAAPTDVDEDAAEPKQNLIKDPPLTPPPRPLTSSEVVGLRDPDDPELCLQLEAKKSRSLPVSPQPQASHKLAAAALFEFGQTSPGRGSVDRTPVKSIKPDQKVAPVRRRLPPVNGGATDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVHWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGASRDGASAHPMLPDQRMSVYGEDEEEDEELAAAILRQDHEDPEPKRARLMADTALDLNQRQRKRSRDGNYATPSPSHVEALRPDVESEASPRTAVTPSGQSQPTSTIVRNPFASPNPQSLQAHLLSGTGTSSSASSSSSGGTSSSTVGTAAVGTSSSSAASSSSAGTYRTAARSCSPPPHHQHQHHHPAGSNGSSAAALLHSPTGGGSSGGAQSSLPPHMAAAVAAAAHHAAAAVPQQAPPPAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGGNGGGAAAAPASGAVGGAVPSASSVGSSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQAHGTYIGGGTTSNGYHSAAAAKMAAQNAALAPPDASSPLSTMTESLRRQILSQQQQAAQHQQHQQQAPHMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQHSGGGGGGGRGSENLPDLTALGLMGLPGLNVLPSRGAGGNGGGGGGAAAPSSAASYARELTRERERDRELKEAMQARQYGNQSRGGGSNSSAKAQSNRPGAASPYSSHYAKQQQQQQQQQQQQQHSKQQEQHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVQAQNKSPRFEDFFPGPGGPQDMSELFVNSDAAAAAAAAAAAAAYAPVRESPLMKIKLEQQQHATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00574735;
90% Identity
iTF_00563826;
80% Identity
iTF_00480924;