Dobs008224.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila obscura
Gene Symbol
bab2
Assembly
GCA_018151105.1
Location
NW:2452669-2486132[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-17 6.5e-14 51.1 0.0 1 43 704 747 704 749 0.95

Sequence Information

Coding Sequence
aTGGACATGACCAAACAGATTATGGACTTTGAAATAAAGTCGGAGGGCGAGTACGAGGCCAGCGACTACACCCGCATGTCGCCTGCCACAGAGGAGCCCAAGGgtgagccagagccacaacAGAATGATGCGGCAGAATCCATCACTGAAATGGACACCAAATGCTCCTCCAACGATGAGGAGGAACACAGCGCagaggcagccacagcaacagccacagcaacagccacagagaAGGCAACGCCCACAGCCATAGATGTGGATGAAGATGCAGCGGAACCAAAGCAAAATCTGATCAAAGATCCACCACTGACACCGCCACCGAGGCCTCTGACCTCCAGCGAAGTGGTGGGCCTCCGGGATCCCGATGATCCCGAGCTGCACCTCCAATTGGAGGCAAAGAAATCCCGCTCCCTGCCCGTGTCGCCACAGCCGCAGGCCAGCCACAAGCTTGCAGCGGCGGCACTCTTCGAATTCGGACAGACATCGCCACAGCGCGGATCGGTGGATCATCGAGGTGCACCGGTGCTGGGGAAACCCATCAAAACCGACCAAAAGGTGGCACCCGCCAGGCGGCGACTGCCGCCCGTGAGCGGTGGGGCCACGGACAACCAGCAGTTCTGCCTGCGGTGGAACAACTACCAGTCCAATCTCACCAATGTCTTCGATGAGCTGCTGCAGAGCGAGTCCTTTGTGGATGTGACCCTCTCCTGCGAGGGGCAGTCCATCAAGGCCCACAAAATGGTCCTCTCCGCCTGCTCGCCCTACTTCCAGGCCCTGTTCTACGATAATCCCTGCCAGCATCCGATCATCATCATGCGCGATGTCCACTGGTCGGATCTGAAGGCCCTCGTCGAGTTCATGTACAAGGGGGAGATCAATGTGTGCCAGGATCAAATCAATCCCCTGCTGAAGGTCGCCGAAACCCTGAAGATCCGCGGCCTGGCCGAGGTGAGTGCTGGGGCCAGTCGCGATGGCGCCTCGGCGCATCCCATGATCCCCGACCAGCGCATGTCCGTCTACggggaggacgaggaggaggatgaggagctgGCAGCCGCAATCCTGCGGCAGGATGACGATCCCGAGCCAAAGAGAGCCCGACTCCTGGCAGACACCGCCCTGGACCTCAATCAGCGGCAGAGGAAGCGCTCGCGGGATGGAAACTATGCCACGCCCAGTCCGTTGCATGGCGACAGCCTCCGCCCCGATGTGGAGTCGGAGTCTTCGCCCCGGACGGCAGTGACGCCCAGTGGCCAGAGCCAGCCCACATCGACGATCGTGCGGAATCCGTTCGCCTCCCCGAATCCCCAGTCGCTGCAGGCGCACCTCCTCGCGGGCACAggcacctcctcctccgcctcgagcagcagctccgGCGGAACCTCCGCCTCCACAGTGGGCACAGCCGCCGTGGGCAACTCCACATCGTCGGCGGCCTCCTGCTCATCGGCGGGCACGTACCGCACCGCGGCACGCAGCTGCTCGCCGCCAccccaccaccagcaccaccccTCGGGCAGCTCCAACGGGAGCTCGGGAGCAGGCGCGCTGCTCCACTCCCCCACTGGCGGGGGATCATCGAGTGGGGCACAGTCCTCGCTGCCACCACACATGGCCGCCGCAGTGGCCGCCGCTGCACAtcatgccgccgccgctgtgCCCCAGCAGCCGCCACCACCCGCCATGCATCATCatgcagcggcggcagccgcCCAACAGCTGGCGGCCCAGCACCAATTGGCGCACTCGCACGCGATGGCCAGCGCCCTGGCAGCGGCTGCAGGAGGCGCCGCTGCTGCACCCGCCAGCGGTGCGGTGGGCGGTGCCGTTCCCACTGCCTCATCGGTGGGTTCATCGCATCACGATGACATGGAAATCAAGCCGGAAATCGCCGAAATGATACGCGAAGAAGAGAGGgCCAAAATGATCGAAAGCGGCGGACATGGCGGTTGGatgggcgctgctgctgcggcaacAGGCGCTTCTGTGGCGGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAATGCTGGAACACCAACCAGCAGAATCTCGTGCAGCAGTTGCGCTTCCGCGAACGCGGCCCCTTGAAGTCGTGGCGCCCCGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTCAAGGAGGGGCTCTCCCTCTCGCAGGCAGCACGCAAATTCGACATCCCCTACCCCACGTTCGTGCTGTATGCGAATCGAGTGCACAACATGCTGGGACCCTCCCTCGATGGCGGCACTGATCCCCGGCCCAAGGCCAGGGGCAGGCCGCAGCGCATCCTGTTGGGCATGTGGCCGGAGGAGCTGATTCGCAGTGTCATCAAGGCGGTGGTCTTCAGGGACTATCGCGAGATCAAGGAGGACATGGGGGCACATCAGTACGCGAATGGACAGTCGCATGCCACGTACATTGGTGGCGGCACCACTACCAATGGCTATCACAGCGCTGCAGCCGCCAAGATGGCCGCACAGAATGCCGCGCTGGCTCCGCCCGATGCCAGCAGTCCGCTGAGCACCATGACAGAGTCCCTGCGCCGCCAGATCctgtcgcagcagcagcaggcggcgcagcatcagcagcaccaacagcaggcGCCGCACATGTACAAGTCGCCGGCCTACTTGCAACGTTCCGAGATCGAGGATCAGGTctcggcggcagcggctgtggcagcggcggcggccaagCATCAGCagagcggcggcggtggcggcgccGGTGGCCGTGGCTCTGAGAATCTGCCCGATCTGACGGCCTTGGGGCTGATGGGGCTCCCGGGTCTGAATGTCCTGCCATCGCGCGGTGCAGGCGGCAATGGGGGTGGCGGTGGTGCGGCGGCTCCCTCGAGTGCGGCCAGCTATGCGCGTGAGCTGACAcgcgagcgggagcgggaTCGGGAGCTCAAGGAGGCGATGCAGGCGCGTCAGTATGGGAATCAGTCGCGCGGCGGCAGCAATTCCGCCTCCAAGGCGCAGTCGAATCGTCCTGGCGCCGCCTCCCCCTACTCCACGCACTAtgcgaagcagcagcagcagcagcaacagcaacagcagcagcacgcgAAGCAGGAGCATCCGAATTATGCGTACAACAAGCGCTTCCTGGAGAGCCTGCCGGCGGGCATTGACTTCGAGGCCATTGCGAATGGCCTGCTGCAGAAATCGGTGCAGGCGCAGAACAAGAGTCCCCGCTTCGAAGACTTCTTTCCGGGGCCCGGGGGGCCGCAGGATATGAGCGAGCTGTTTGTGAATTCGGatgcggcggcagcagcggcagccgctGCGGCATATGCCCCAGTGCGTGAGTCGCCACTGATGAAGATcaagctggagcagcagcagcatgccaCAGAGCTGCCGCATGAGGATTGA
Protein Sequence
MDMTKQIMDFEIKSEGEYEASDYTRMSPATEEPKGEPEPQQNDAAESITEMDTKCSSNDEEEHSAEAATATATATATEKATPTAIDVDEDAAEPKQNLIKDPPLTPPPRPLTSSEVVGLRDPDDPELHLQLEAKKSRSLPVSPQPQASHKLAAAALFEFGQTSPQRGSVDHRGAPVLGKPIKTDQKVAPARRRLPPVSGGATDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVHWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGASRDGASAHPMIPDQRMSVYGEDEEEDEELAAAILRQDDDPEPKRARLLADTALDLNQRQRKRSRDGNYATPSPLHGDSLRPDVESESSPRTAVTPSGQSQPTSTIVRNPFASPNPQSLQAHLLAGTGTSSSASSSSSGGTSASTVGTAAVGNSTSSAASCSSAGTYRTAARSCSPPPHHQHHPSGSSNGSSGAGALLHSPTGGGSSSGAQSSLPPHMAAAVAAAAHHAAAAVPQQPPPPAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAGGAAAAPASGAVGGAVPTASSVGSSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQSHATYIGGGTTTNGYHSAAAAKMAAQNAALAPPDASSPLSTMTESLRRQILSQQQQAAQHQQHQQQAPHMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQSGGGGGAGGRGSENLPDLTALGLMGLPGLNVLPSRGAGGNGGGGGAAAPSSAASYARELTRERERDRELKEAMQARQYGNQSRGGSNSASKAQSNRPGAASPYSTHYAKQQQQQQQQQQQHAKQEHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVQAQNKSPRFEDFFPGPGGPQDMSELFVNSDAAAAAAAAAAYAPVRESPLMKIKLEQQQHATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00574735;
90% Identity
iTF_00563978; iTF_00480924; iTF_00480788; iTF_00514815; iTF_00514955; iTF_00601120; iTF_00600980;
80% Identity
iTF_00563978;