Basic Information

Insect: Drosophila subobscura
Gene Symbol: bab2
Assembly: GCA_008121235.1
Location: NC:22453749-22489242[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.2e-17 6e-14 51.0 0.0 1 43 706 749 706 751 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.2e-17	6e-14	51.0	0.0	1	43	706	749	706	751	0.95

Sequence Information

Coding Sequence: atggACATGACCAAACAGTTGATGGACTTTGAAATAAAGTCGGAGAGCGAGTTCGAGGCGAGCGACTACACCCGCATGGCCACAGAGGAGCCCAAGGGGTCGCCAGAACCGCAACAGAATGATGTGGAAACCATTCCCGAAATGGACAGCAAGACCAACtccaacgaggaggaggaacacaGCGCAGAGGCTGCCGCAGAAGCAGTCgctgccacagacagagagaaggcaACGCCACCCACAGTGCAAGATGTGGATGAAGATGCCGCGGAACCAAAGCTAAATCTGATCAAAGATCCTCCGCTGACACCGCCACCGCGGCCCATGACCTCCAGCGAAGTGGTGGGCATGCGGGATCCCGACGATCCCGAGTTGCGCCTCCAATTGGAGGCCAAGAAAAGCCGCTCCCTGCCCGTGTCGCCGCAGCCGCAGGCCAGCCACAagctggcagcagccgcactcTTCGAGTTCGGACAGACATCGCCGACTACCCCCGGAAAACCCATCAAAATGGACCAAAAGGTGACACCAGCCAGGCGGCGTCTGCCGCCCGTGGTCAGCGGTGGAAGTGGCGGGGGGGCCACGGACAACCAGCAGTTCTGCCTGAGGTGGAACAACTATCAGTCCAACCTCACGAACGTCTTCgacgagctgctgcagagcgAGTCCTTCGTGGATGTGACCCTCTCCTGCGAGGGCCAGTCCATCAAGGCACACAAAATGGTGCTGTCCGCCTGCTCGCCGTACTTCCAGGCCCTGTTCTACGACAATCCCTGCCAGCATCCGATCATCATCATGCGCGATGTCCACTGGTCGGATCTCAAGGCCCTCGTGGAGTTCATGTACAAGGGGGAGATCAATGTGTGCCAGGACCAGATCAATCCGCTGCTAAAGGTCGCCGAAACCCTCAAGATTCGCGGCCTGGCCGAGGTGAGTGCCGGCGCGAGTCGCGATGGCGCCTCCGCGCATCCCATGATCCCCGACCAGCGCATGTCCGTCTACggggaggacgaggaggaggatgaggagctgGCGGCCGCCATTCTGCGGCAGGACGATGATCCGGAGCCCAAGCGCGCCCGTCTGCTGGCGGACACCGCCATGGACCTcaatcagcggcagaggaaacGTTCGCGGGATGGCAACTATGCCACGCCCAGTCCGCTGCATGGCGACAGCCTCCGCCCCGACGTGGAGTGCGAGTCCTCGCCCCGCACCGCAGTCACGCCCAgtggccagagccagcccACATCGACGATCGTGCGGAACCCGTTCGCCTCCCCAAACCCACAGTCGCTGCAGGCGCACCTCCTCGCGGGCACAggccactcctcctcctccgcctcgagcagcagctccggcgGCACATCCAGCACGGGAGGCACAGCCGTCGTGGGCAACTCCTCATCGTCGGCATCGTCCTCGTCGGCGGGCACTTACCGCACGGCGGCACGCAGCTGCTCGCCGCCAccgcaccaccaacagcaccagcaccatccTTCGGGCAGCTCCAACGGCAGCTCCTCGGCAGGCGCCCAGCTGCACTCGCCCAACGGCGGTGGATCGTCGAGCGGTGCCCAGTCCTCGCTGCCACCACACATGGCCGCCgcagtggctgcggcagcacatcatgccgctgccgctgtgccccagcagccacagccacccgCCGCCATGCATCAtcatgcagcggcagcagccgcccagcagctggcggcCCAGCACCAATTGGCGCACTCGCATGCCATGGCCAGCGCTCTGGCAGCCGCGGCAGCGGGCGGCAATGGCGGCGGCGCAGCCTCCGCACCCGCCAGCGGAGCCGTGGGAGGTGGAGCCGCACCCTCGGCCTCATCGGTGGGATCATCGCATCACGATGACATGGAAATCAAGCCGGAAATTGCCGAAATGATACGCGAAGAGGAGAGGGCAAAAATGATCGAAAGCGGCGGCCATGGCGGCTGGatgggcgctgctgctgcggcaacaGGCGCTTCTGTGGCGGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAAAAGTGCTGGAACACCAACCAGCAGAATCTCGTGCAACAGTTGCGCTTCCGGGAGCGTGGCCCGCTCAAATCGTGGCGCCCCGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTCAAGGAgggtctctccctctcccaggCAGCCCGCAAGTTCGACATCCCCTACCCCACATTCGTGCTGTACGCAAATCGAGTCCACAACATGCTGGGCCCCTCGCTCGATGGCGGCACCGATCCGCGGCCCAAGGCCCGGGGCAGGCCGCAGCGCATTCTGCTGGGCATGTGGCCGGAGGAGCTCATCCGCAGCGTCATCAAGGCGGTGGTCTTCCGCGACTACCGCGAGATCAAGGAGGACATGGGAGCGCATCAGTACGCCAATGGACAGTCGCATGCGACCTACATTGGGGGCGGCACCACTACCAATGGCTATCACAGCGCAGCTGCCGCCAAGATGGCCGCACAGAATGCCGCCTTGGCACCGCCCGATGCCAGCAGTCCGCTGAGCACCATGACCGAGTCCCTGCGCAGGCAAATcctgtcgcagcagcagcaggcggcgcagcatcagcagcagcagcagcaccaacagcaggcGCCGCACATGTACAAGTCCCCGGCCTACTTGCAACGCTCCGAGATCGAGGACCAGGTctcggcggcagcggcggtggctgcggcggcggccaagCATCAGCAGAGCGGCGGCAATGTCGGCGGCGGGCGTGGCTCTGAGAATCTGCCCGATCTGACGGCCCTGGGACTGATGGGGCTGCCCGGCCTCAATGTGCTGCCATCGCGCGGTGCAGGCGTCAATGGCGGGGGAGGCGGTGGTGCGGCGGCGCCCTCGAGTGCGGCCAGCTATGCGCGAGAGCTGACACGCGAGCGGGAGCGGGACCGGGAGCTCAAGGAGGCGATGCAGGCGCGTCAGTACGGGAATCAGTCGCGCGGCAGCAACTCCTCCTCCAAGGCGCAGCAGTCGAATCGCCCCGGTGCCGCCTCCCCCTACTCCACGCACTacgccaagcagcagcagcagcagcagcaggtgcaacaCGCGAAGCAGGAGCATCCGAATTACGCGTACAACAAGCGCTTCCTGGAGAGCCTGCCGGCGGGCATTGACTTTGAGGCGATTGCCAACGGTCTGCTGCAGAAGTCGGTGCAGGCGCAGAACAAGAGTCCCCGCTTCGAAGACTTCTTCCCGGGCCCAGGGGGGCCGCAGGACATGAGCGAACTCTTCGTGAATCCCgatgcggcggcagcagcggccgccgcGGCAGCCTATGCCCCGGTGCGCGAGTCGCCGCTGATGAAGAtcaagctggagcagcagcagcatgccacGGAGCTGCCGCACGAGGATTGA
Protein Sequence: MDMTKQLMDFEIKSESEFEASDYTRMATEEPKGSPEPQQNDVETIPEMDSKTNSNEEEEHSAEAAAEAVAATDREKATPPTVQDVDEDAAEPKLNLIKDPPLTPPPRPMTSSEVVGMRDPDDPELRLQLEAKKSRSLPVSPQPQASHKLAAAALFEFGQTSPTTPGKPIKMDQKVTPARRRLPPVVSGGSGGGATDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVHWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGASRDGASAHPMIPDQRMSVYGEDEEEDEELAAAILRQDDDPEPKRARLLADTAMDLNQRQRKRSRDGNYATPSPLHGDSLRPDVECESSPRTAVTPSGQSQPTSTIVRNPFASPNPQSLQAHLLAGTGHSSSSASSSSSGGTSSTGGTAVVGNSSSSASSSSAGTYRTAARSCSPPPHHQQHQHHPSGSSNGSSSAGAQLHSPNGGGSSSGAQSSLPPHMAAAVAAAAHHAAAAVPQQPQPPAAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGGNGGGAASAPASGAVGGGAAPSASSVGSSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGAHQYANGQSHATYIGGGTTTNGYHSAAAAKMAAQNAALAPPDASSPLSTMTESLRRQILSQQQQAAQHQQQQQHQQQAPHMYKSPAYLQRSEIEDQVSAAAAVAAAAAKHQQSGGNVGGGRGSENLPDLTALGLMGLPGLNVLPSRGAGVNGGGGGGAAAPSSAASYARELTRERERDRELKEAMQARQYGNQSRGSNSSSKAQQSNRPGAASPYSTHYAKQQQQQQQVQHAKQEHPNYAYNKRFLESLPAGIDFEAIANGLLQKSVQAQNKSPRFEDFFPGPGGPQDMSELFVNPDAAAAAAAAAAYAPVRESPLMKIKLEQQQHATELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00574735;
90% Identity: iTF_00563826;
80% Identity: iTF_00601120;