Dniv003337.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila niveifrons
Gene Symbol
-
Assembly
GCA_035046325.1
Location
JAWNOC010000039.1:612811-617639[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.0017 0.11 12.9 2.0 1 23 213 235 213 235 0.96
2 25 0.02 1.3 9.6 2.8 1 23 241 263 241 263 0.98
3 25 0.49 32 5.2 3.7 2 23 297 318 296 319 0.94
4 25 0.0036 0.23 11.9 2.7 1 23 394 417 394 417 0.90
5 25 1.7 1.1e+02 3.5 0.9 2 22 424 444 423 444 0.95
6 25 0.42 27 5.4 3.9 1 23 483 505 483 505 0.97
7 25 0.0056 0.36 11.3 0.8 1 23 586 608 586 609 0.94
8 25 0.0016 0.1 13.0 0.1 1 22 618 639 618 639 0.95
9 25 2.2 1.4e+02 3.1 2.2 1 23 648 671 648 671 0.93
10 25 0.00037 0.024 15.0 0.4 2 23 698 719 697 719 0.97
11 25 4.2e-05 0.0027 18.0 3.7 1 23 727 749 727 749 0.98
12 25 0.029 1.9 9.0 2.3 1 23 899 922 899 922 0.95
13 25 0.0076 0.49 10.9 0.9 2 22 930 950 929 950 0.95
14 25 0.028 1.8 9.1 0.3 1 23 959 982 959 982 0.93
15 25 1.5e-05 0.00095 19.4 1.9 1 23 1008 1030 1008 1030 0.97
16 25 0.00066 0.043 14.2 1.2 1 23 1037 1059 1037 1059 0.98
17 25 0.0031 0.2 12.1 0.1 2 23 1086 1109 1085 1109 0.90
18 25 0.0062 0.4 11.2 2.3 1 23 1151 1174 1151 1174 0.96
19 25 0.025 1.6 9.3 0.7 1 23 1211 1234 1211 1234 0.96
20 25 0.00096 0.062 13.7 3.5 1 23 1259 1282 1259 1282 0.97
21 25 1.4e-05 0.00088 19.5 0.1 2 23 1312 1333 1311 1333 0.95
22 25 0.00023 0.015 15.7 3.1 1 23 1339 1361 1339 1361 0.99
23 25 2.2e-06 0.00015 22.0 2.0 1 23 1367 1389 1367 1389 0.97
24 25 5.8e-08 3.7e-06 27.0 2.4 1 23 1395 1417 1395 1417 0.99
25 25 0.00097 0.063 13.7 0.2 1 21 1423 1443 1423 1447 0.91

Sequence Information

Coding Sequence
ATGTTGCCGACTGATATATGCCGCACATGTGCGCTGCAGAATGTTAAATTGTTGGCGCTTTCAACACGCAACGCGAAATACGCGAATAAAAGTTTGTGCGACATTCTGCATGAATTAACACAAAATGATCCCTTAATGGAGCACCTGGATGATAATCTACCGCAGTATCTATGTGACGACTGTCTACGGAAGCTGGAAGATGCTTACGCATTTGTGTTACAAGCACGCCAGGTGCACGAGCAGCTATTGCATAAACTACACAAGGAATTGCAGTGCCTCGATGAGGCACCAATCGACATTGCCACCAATGAGATTAAGAGTGAAGCAGATCTAGCTTTGGAGCAGATAGatagtgcagcagcagcattggatgttgctgttggggAAGCAATCGTTACAGCTCTTAAAATACAGCCAGAGAGCGACAGCAATATTAGCGAAACTGAAGCAGTTGAAGTCAGAGGCAACCTGCTAGACTTGAAGGCAACGCAGCTGAGACGCAGCAACCGCAAACCAAAATTTGCTACCGACAGCGAGAATGAAGAGACTTTAGATTTGAGAGCAATGCCGCTAAAGCGTCGTCGCGGTCGTCCAGCACGTGTTTCGAAAAAGGAAGCCGTCAACAAGGACGGACGACACGCCTGCGATGTGTGTGGCAAGACCTTCTCGTGGCACCGCGATATGCAGCGGCACGCACGCGTTCATTACGAGCAAGCTGCCTACGAGTGTGATACATGTGGCAAGCGATTTCTACGCAAGGATAAATATACTTTCCATCTGCGATCGCATGAGAAACGCAAAGCCAAGCATGCACCATCGACTTTGCCGCAGAGCGACGAGCGTTGGTTTGCAGAGCGCCTCTATAGTTCGGCGCCTTTGAAGCGAATCGAGTGCAAGTTATGCGACTTGAAGTGCCAGCGAATCCAGGAGCTTCGCGAGCACCTCACGAAACATCATGTCAACATCGAGTCACTGTGCAATCTCAGCAATAATAGCGACGTTATAAGGGAACATTTTGACAGCCAAATGTCGAATTTGGAACAGATAAAGCAACAGGTGTGCTTAGAGATTGCCACGGGAAGCGATCAACTTGACAAGTATTGTGTGATAATCAATGCGCATGGCTACGAACTCAGTTTAAATGATTCTGATGAAGAGTTAACTGATGCAAGTCCGGCATATCAATGTTTGCCCTGCAATATTTCCTTTACACGCAAACATCACCTTATTCGGCACTCGCTAGAGGAGCACACTCAAACTCCTTTGCAACGATGCAGCACTTGTCAAATTGGGTTTGTGTGCGAGACTCTGCTGGAACAGCATCAACGCACCCAGTGCCAGAATCAATTGAAACGCCACAACTGTCTAAGCTGTCCAGGCAAATTCATCTGGCTGCAGAATCTAAAGCAACACTCGTGCTCAAAGAAGACGGATCAAGAACGCCAATTCCAATGTTGTCTGTGTGATGAACAACTACACAGCATGTCCTCTCTCCGGTCGCATCTGCTTCAGCATGGCGATGGAGGAAGCGGCCTTGTCGCTAATCAGGCTGCTGCATACTTTCGTTCCTATTATCCGGATGGTGTGACTTGCAGTCAGGAGGAGCTCAGCACGCGCATTGCAAGCGATTTTAAGGTACAGGATTATGGGCAATACTTTAATGCGTGCTCAGGCAGCGGTCGTGAGTTGGATTTCTTTGCCTCGGACACGGAACTAAGTGATGTTGAGCAGTTAAGCACATCGACGTCTGCTCTACATTCATGTACGTTGTGTGGTGTGGCCACAGCTCGACTCGCTCAACTGCTGAGGCATCAAGAGGATCATCACAGCGACGTACCGAACTGTTTGCCTCATGTTTGTAATAAATGTGGCTTGGGATTCGTGGCAGAATCgttgctgcaacaacatcTGCGACGGATTTGCGACAAACAACATGCAAACTTTCATTGCGAGCCATGTAATCTGCATTTCATCTGGCAAACGAACTATGAGCGGCATATGGCGATCAAGCACGAGGTGGACACAGAGGAGGATCAAGAGCAGACGCACAATACTAGATTGAGAAGCAAACGACAACAAGCTGCCAAGTTGCAGTGCAATCAGTGTGAAAAGGTCTTTATCTGGCCAAAGGATCTAACGCGTCACAAGCGCATTCATCAGCCGCAGGCATCAGCACAGTTCGAGTGCAGTTTCTGTGACCGCAAGTTTCATCGCAAGGATGGCCTAAAGTCCCATCTTCGAGTACACGGCGAACAGCAGCTAGAGGCGTCGCTGGCACCTTTTGAGCAAATGGATGCAAGTGTACTACAGAGAATGCCAGCAGTGTTGACTCAGCTGTGTCGTCCGAATGGCTGTAAGCAGATTCAGTGCATGATCTGTCTAtcgcaacacacaaaaatctcTGATTTGCGAGCGCATTTGATGATGCATCAGATAAGCGTGGAGTTCGTAGGGGAGCGAGCCAAACCGGAGAGCATTTCAAACATTAGCCGCGGACTGTATCCGGAGCTGGCGACACCACTGGATAAGCAGCAATTGATTGAGCGCATACAGCGTGATCTGGGCAAAGGGATTGAGTTGGAGAGATTCGTTTCGATCACGAACGAGGCAGCGATTGAGCTAAGTCTTGACAGCAGTGAAACTGACACGGATTCAGACTCTACCGAATCGCAAAAAACTGACACTGGACGCCAATATAATTGTGACCTTTGTCAACTGCAATTGACACGCAAACATCAACTCTATGCCcatcagctgcaacagcacACTTGGCAAGAGGCAACGCTCATCTGTTCACATTGCCAGGCCAAGTTCGTCAAtgagcagctgctggagcATCATTATCGCACTCTCTGTCGCAATGCTCAGAAGCGTTTTCTTTGCCGTAAGTGTCCACTGCGCTTTCGCTGGCGAGACAATCTCAAATTGCACATCGACGTGGCCCATCAAGAAGTCGCCGGAGCACAGACGACCACTCAAGGCATTCAATTGAATACGTCAAGTCTGTTGCCCGTTGTGAGCTACGATTGCCAAGAGTGCAACCGCAgcttcaaaatgcaaaaggatCTCACTCGCCACACTCTAATGCATGCCCAGGACTCTAGCATTTATCGATGTCGGTGGTGTGCCCGCCGTTTCTATCGCGAAACCAATCTGCTGCAGCACATCGAACGCCATGGCATCAATGCCGCTCAGCTGCCTTATGCCGAAGCCCTCCTCAATGCCAGTCGCCATCCGCATGGTCAAAAGTGCATCGAGTGCAAGGTGTGCGATGTGCGCTTCCCAACAATTGCCTCACTGCGCACACACTTGATGTCCACGCCCCATGGTAGCCATCATGATGTCGGCTCGATGCTCAACTACTCCATCACCAATCAGCTGGGTTACGAGTTGCATTTGGACGACTCGGAAACAGATGAGGAGGGAAAACCTCCGGGAGTACCTACTCACTACACCTGCGGCATGTGCCAGCTGCGTTGTGTGCGCAAATATGAGCTCTATCAGCATCAGCAGGCAATGCATCGACTGGAACGGATTGCCGAGGGATGTGATAAATGCATCTACAAGAGCGTTTCCCCCGATCTGATTGCCTATCATCGTCGTGTGCTGTGTGATAACACAGAAAAGCAATTTAAGTGCGTCAAATGTGGCTACAAGTTCATGTGGGAGACGAACTTGCTGCAACACATCCAGCTGCAACATCCTAGCAACGACAAtcagcaggaggaggagataCCACAACCACTGGACTTGCCTGCAGCTGAAAGTCAGATCTTTCAGTGTGGCCAGTGTCCACGTAAATACAATCGCAAGGATCGGCTAACTGCACATGTTAAGAAGTGCCATTCTCCAGGAGCCGCGAGCCCAACGGGAGGAAATGCATCCAAAGCAGCAAAGGCTGCAGCAACTGTGGCTAAGCAGCACAAAAGTTTCCTCTGTGCCTTTTGCGGCAAGGCGGTCAGCTCCTCATCGAATCTTATCATACACATACGTCGGCATACCGGTGAGAAGCCATTCAAATGTGACTTCTGCGACATGGCGTTTCCTCGCTCCTCTGATCTTCAGTGCCATCGCCGCACTCACACTGGAGAGCGGCCCCATGTTTGCACTGTGTGCCAAAAGGGATTTGCCCGTTCCtacaagctgcagcagcacatGCGTATTCACAACGGCGAACGTCCCTACAAATGTACCTATTGTGACAAGAGTTTCACCCAGTCCAATGATCTAACTTTGCATATTCGACGGCACACGGGCGAGCGACCTTATCAGTGTGAGACGTGCGGGGAACGCTTCATTCAGGGCACAGCACTCAAGAATCATAGACTACAGAACGGACATTTCGAAACCGCAGATTCCttgactaaaaataattag
Protein Sequence
MLPTDICRTCALQNVKLLALSTRNAKYANKSLCDILHELTQNDPLMEHLDDNLPQYLCDDCLRKLEDAYAFVLQARQVHEQLLHKLHKELQCLDEAPIDIATNEIKSEADLALEQIDSAAAALDVAVGEAIVTALKIQPESDSNISETEAVEVRGNLLDLKATQLRRSNRKPKFATDSENEETLDLRAMPLKRRRGRPARVSKKEAVNKDGRHACDVCGKTFSWHRDMQRHARVHYEQAAYECDTCGKRFLRKDKYTFHLRSHEKRKAKHAPSTLPQSDERWFAERLYSSAPLKRIECKLCDLKCQRIQELREHLTKHHVNIESLCNLSNNSDVIREHFDSQMSNLEQIKQQVCLEIATGSDQLDKYCVIINAHGYELSLNDSDEELTDASPAYQCLPCNISFTRKHHLIRHSLEEHTQTPLQRCSTCQIGFVCETLLEQHQRTQCQNQLKRHNCLSCPGKFIWLQNLKQHSCSKKTDQERQFQCCLCDEQLHSMSSLRSHLLQHGDGGSGLVANQAAAYFRSYYPDGVTCSQEELSTRIASDFKVQDYGQYFNACSGSGRELDFFASDTELSDVEQLSTSTSALHSCTLCGVATARLAQLLRHQEDHHSDVPNCLPHVCNKCGLGFVAESLLQQHLRRICDKQHANFHCEPCNLHFIWQTNYERHMAIKHEVDTEEDQEQTHNTRLRSKRQQAAKLQCNQCEKVFIWPKDLTRHKRIHQPQASAQFECSFCDRKFHRKDGLKSHLRVHGEQQLEASLAPFEQMDASVLQRMPAVLTQLCRPNGCKQIQCMICLSQHTKISDLRAHLMMHQISVEFVGERAKPESISNISRGLYPELATPLDKQQLIERIQRDLGKGIELERFVSITNEAAIELSLDSSETDTDSDSTESQKTDTGRQYNCDLCQLQLTRKHQLYAHQLQQHTWQEATLICSHCQAKFVNEQLLEHHYRTLCRNAQKRFLCRKCPLRFRWRDNLKLHIDVAHQEVAGAQTTTQGIQLNTSSLLPVVSYDCQECNRSFKMQKDLTRHTLMHAQDSSIYRCRWCARRFYRETNLLQHIERHGINAAQLPYAEALLNASRHPHGQKCIECKVCDVRFPTIASLRTHLMSTPHGSHHDVGSMLNYSITNQLGYELHLDDSETDEEGKPPGVPTHYTCGMCQLRCVRKYELYQHQQAMHRLERIAEGCDKCIYKSVSPDLIAYHRRVLCDNTEKQFKCVKCGYKFMWETNLLQHIQLQHPSNDNQQEEEIPQPLDLPAAESQIFQCGQCPRKYNRKDRLTAHVKKCHSPGAASPTGGNASKAAKAAATVAKQHKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCETCGERFIQGTALKNHRLQNGHFETADSLTKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00589669;
90% Identity
iTF_00556638; iTF_00472482; iTF_00553831;
80% Identity
-