Basic Information

Insect: Drosophila albomicans
Gene Symbol: -
Assembly: GCA_009650485.1
Location: NC:7086750-7091684[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0014 0.086 12.9 2.0 1 23 215 237 215 237 0.96

2 26 0.017 1 9.6 2.8 1 23 243 265 243 265 0.98

3 26 0.63 38 4.6 3.2 2 23 299 320 298 321 0.94

4 26 0.00019 0.012 15.7 3.9 1 23 396 419 396 419 0.94

5 26 0.56 33 4.8 1.8 1 22 425 446 425 446 0.96

6 26 3.9 2.4e+02 2.1 0.8 1 19 455 473 455 476 0.90

7 26 0.31 18 5.6 3.0 1 23 485 507 485 507 0.97

8 26 0.0073 0.44 10.7 0.3 1 23 588 611 588 611 0.92

9 26 0.0013 0.079 13.0 0.1 1 22 620 641 620 641 0.95

10 26 1.9 1.1e+02 3.1 2.2 1 23 650 673 650 673 0.93

11 26 0.00031 0.019 15.0 0.4 2 23 700 721 699 721 0.97

12 26 0.00012 0.0074 16.3 3.6 1 23 729 751 729 751 0.98

13 26 0.029 1.8 8.8 2.0 1 23 901 924 901 924 0.95

14 26 0.0044 0.26 11.4 0.9 2 22 932 952 931 952 0.95

15 26 0.024 1.4 9.1 0.3 1 23 961 984 961 984 0.93

16 26 2.8e-05 0.0017 18.3 1.7 1 23 1010 1032 1010 1032 0.96

17 26 0.00056 0.033 14.2 1.2 1 23 1039 1061 1039 1061 0.98

18 26 0.0029 0.17 12.0 0.0 2 21 1088 1107 1087 1108 0.94

19 26 0.0053 0.32 11.1 2.3 1 23 1153 1176 1153 1176 0.96

20 26 0.021 1.3 9.3 0.7 1 23 1213 1236 1213 1236 0.96

21 26 0.00081 0.049 13.7 3.5 1 23 1261 1284 1261 1284 0.97

22 26 1.1e-05 0.00068 19.5 0.1 2 23 1314 1335 1313 1335 0.95

23 26 0.00019 0.012 15.7 3.1 1 23 1341 1363 1341 1363 0.99

24 26 1.9e-06 0.00011 22.0 2.0 1 23 1369 1391 1369 1391 0.97

25 26 4.9e-08 2.9e-06 27.0 2.4 1 23 1397 1419 1397 1419 0.99

26 26 0.00082 0.049 13.7 0.2 1 21 1425 1445 1425 1449 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0014	0.086	12.9	2.0	1	23	215	237	215	237	0.96
2	26	0.017	1	9.6	2.8	1	23	243	265	243	265	0.98
3	26	0.63	38	4.6	3.2	2	23	299	320	298	321	0.94
4	26	0.00019	0.012	15.7	3.9	1	23	396	419	396	419	0.94
5	26	0.56	33	4.8	1.8	1	22	425	446	425	446	0.96
6	26	3.9	2.4e+02	2.1	0.8	1	19	455	473	455	476	0.90
7	26	0.31	18	5.6	3.0	1	23	485	507	485	507	0.97
8	26	0.0073	0.44	10.7	0.3	1	23	588	611	588	611	0.92
9	26	0.0013	0.079	13.0	0.1	1	22	620	641	620	641	0.95
10	26	1.9	1.1e+02	3.1	2.2	1	23	650	673	650	673	0.93
11	26	0.00031	0.019	15.0	0.4	2	23	700	721	699	721	0.97
12	26	0.00012	0.0074	16.3	3.6	1	23	729	751	729	751	0.98
13	26	0.029	1.8	8.8	2.0	1	23	901	924	901	924	0.95
14	26	0.0044	0.26	11.4	0.9	2	22	932	952	931	952	0.95
15	26	0.024	1.4	9.1	0.3	1	23	961	984	961	984	0.93
16	26	2.8e-05	0.0017	18.3	1.7	1	23	1010	1032	1010	1032	0.96
17	26	0.00056	0.033	14.2	1.2	1	23	1039	1061	1039	1061	0.98
18	26	0.0029	0.17	12.0	0.0	2	21	1088	1107	1087	1108	0.94
19	26	0.0053	0.32	11.1	2.3	1	23	1153	1176	1153	1176	0.96
20	26	0.021	1.3	9.3	0.7	1	23	1213	1236	1213	1236	0.96
21	26	0.00081	0.049	13.7	3.5	1	23	1261	1284	1261	1284	0.97
22	26	1.1e-05	0.00068	19.5	0.1	2	23	1314	1335	1313	1335	0.95
23	26	0.00019	0.012	15.7	3.1	1	23	1341	1363	1341	1363	0.99
24	26	1.9e-06	0.00011	22.0	2.0	1	23	1369	1391	1369	1391	0.97
25	26	4.9e-08	2.9e-06	27.0	2.4	1	23	1397	1419	1397	1419	0.99
26	26	0.00082	0.049	13.7	0.2	1	21	1425	1445	1425	1449	0.91

Sequence Information

Coding Sequence: atgTTACCGACTGATATATGCCGCACATGTGCGCTGCACAATGTTAAATTGTTGGCACTTTCAACACGCAACGCGAAATATGCGAATAAAAGTTGGTGCGACATTTTGTATGAATTAACACAAAATGATcCCTTAATGGAACAGCTGGATGACAATCTACCACAGTATCTATGTGACGACTGCCTACGTAAGCTGGAAGATGCTTACGCATTTGTGTTACAAGCTCGTCAGGTGCACGAGCAGCTATTGCATAAACTACACAAAAATTTGCAGTGCCTCGATGAGGCACCAATCGACATTGCAACGAATGAGATTAAGAGCGAAACAGATCTTGCTTTGGAGCAGATAGataatgcagcagcagcattggaTGTTGCTGGTGGGGAAGCGATTGCTGCAACTCTTAAAATACAGCCAgagagcgacagcgacagcaatgTTGGCGAAACTGAATCATTTGAAGCCAGAGGCAACGTGCTAGACTTGAAGCCAACGCAGCTGAGACGCAGCAATCGCAAACCAAAACTTGCTACTGACAGTGAGAATGAAGAGACTTCAGATTTGAAAGCAATGCCGCTAAAGCGTCGTCGCGGTCGTCCAGCGCGTGTTTCGAAAAACGAAGTCATCAACAAAGACGGACGACACGCCTGTGATGTGTGTGGCAAGACCTTCTCGTGGCACCGCGATATGCAACGACACGCACGCGTTCATTACGAGCAGGCTGCCTACGAGTGCGATACATGTGGCAAGCGTTTTCTACGCAAGGATAAATATACTTTCCATCTTCGATCGCATGAGAAACGCCAGGCCAAGCATGCACCAACAACTTTGCCGCAGGGCGACGAGTGGCGGTTTGCAGAGCGCCTTTATAGCTCGGCGCGTTTAAAGCGAATCGAGTGCAAGCTATGCGACTTGAAGTGCCAGCGAATTCAGGAGCTTCGCGAGCACCTCACGAATCACCATGTCAACATCGAGTCACTGTGCAATCTCAGCAATAATAGCGATGTTATAAGGGAACATTTTGACAGCCAAGCGTCGAATTTGGAACAGATAAAGCAACAGGTGTGCTCAGAGATTGCTACGGGAAGCGATCAACTTGACAAGTACTGTGTGATAATAAATGCCCATGGCTACGAACTCAGTTTAAACGATTCCGATGAAGAGTTAGCTGATACAACTCCGGCATATCAATGCTTGTCCTGCAATATTTCCTTTACACGCAAACATCACCTTATTCGGCACACGCTAGAAGAGCACAATCAAACTCCTTTGCATCGTTGCAACACTTGTCAAATTGGGTTTGTGTGCGAGACTCTGCTGGAACAGCATCAACGCACCCAGTGCCAGAATCAATTGAAACGCCACAGCTGTCCAAACTGTCCAGGCAAATTCATCTGGCTGCAGAATCTAAAACAACACGGGTGCTTAAAGAAGACGGATCAAGAACGCCAATTCCAATGTTGTCTGTGTGATGAACAACTACACAGCATGTCCGCTCTCCGTTCGCATCTGCTTCAGCATGGCGATGGAGCTAGCGGAATTGATGCTAATCAAACTGCTGCCTACTTTCGATCTAATTATCCGGATGGTGTGACTTGCAGTCAGGAGGAGCTCAGCACACGCATTTCAAATGATTTCAAGGTACAAGACTATGGGCAATACTTCAATGCGTGCTCAGGCAGCGGTCGCGAGTTGGACTTCTTTGCATCGGACACAGAACTAAGTGATGTTGAGCAGCTAACCACATCGACGTCTGCTCTACATTCATGTACGTTGTGTGGTGTAGCCACAGCTCGACTCGCTCAACTACTGAGGCATCAAGAGGATCGTCACAGCGACGTCACAAACTATTTACCTCATGTTTGTAATAAATGTGGTTTGGGGTTCGTGGCGGAGTCTTTACTGCAACAACATCTGCGACGGATTTGCGACAAACGACATGCAAACTTTCATTGTGAGCCATGTAATCTGCATTTCATCTGGCAAACGAATTATGAGCGGCATATGGCGATCAAGCACGATGTGAACACAGAGGAGGATCAAGAGCAGACGCACAATACTAGATTGAGAAGCAAACGACAACAAGCTGCCAAGCTGCAGTGCAATCAGTGTGAAAAGGTCTTTATCTGGCCAAAGGATCTAACGCGTCACAAGCGCATTCATCAGCCGCAGACATCGGCACAGTTCGAGTGCAGTTTTTGTGAGCGCAAGTTTCATCGCAAGGATGGCCTAAAATCTCATCTTCGTGTACACGGCGAACAGCAACTAGAGGTGCCGCTCGCTCCTGTTGAGCAAATGGATGCAAGTGTACTACAGCGAATGCCAGCAGTGTTGACACAGCTGTGTCGTCCGAACGGTTGCAAGCAGATCCAGTGTATGATCTGTCTATCGCAACACACAAAGATCTCTGACTTGCGAGCGCATTTGATGAAGCATCAGATTAGCGTGGAGTTCGTGGGGGAGCGAGCTAAACCGGAGAGCATTTTAAGCATTAGCCGCGGACTGTATCCGGAGCTGGCGACACCCCTGGATAAGCAGCAATTGATTGAACGCATACAGCGTGATCTGGGCAAAGGCATTGAGTTGGAGAGATTCGTTTCGATCACGAACGAGGCAGCGATTGAGCTCAGTCTTGATAGCAGTGAAACTGAAACGGATTCAGActcaaccgaatcgcaacaaACTGACACTGGACGTCAATATAATTGTGACCTATGTCAAGTGCAGTTGACCCGCAAACATCAACTCTATGCccatcagctgcagcagcacacTTGGCAAGAGGCGACGCTCGTCTGTTCACATTGCCAGGCCAAGTTCGTCAATGAGCAGCTACTGGAGCATCATTATCGTACTCTCTGTCGCAATGCTCAAAAGCGTTTTCTTTGCCGCAAGTGTCCACTGCGCTTTCGCTGGCGAGACAATCTCAAGCTGCACATCGACGTGGCACATCAAGAAGCGGCTGGATCACAGTCGAGTATTCAAGGCATTCAATTGAATACGACAAGTCTGTTGCCAATTGTGAGCTACGATTGCCAAGAGTGCAACCGCAGcttcaaaatgcaaaaggaTCTCACTCGCCACACTCTACTGCATGCCCAGGACTCCAGTATTTATCGATGTCGGTGGTGTGCTCGCCGTTTCTATCGCGAAACCAATCTGCTGCAGCACATCGAACGCCATGGCATCAATGCCGCTCAGCTGCCATATGCCGAAGCCATCCTCAATGCCAGTCGCCATCCGCATGGTCAAAAGTGCATCCAATGCAAGGTGTGCGATATGCGCTTTCCAACAATTGCCTTATTGCGTACACACTTGATGTCCACGCCCAATGGTAGCCATCATGATGTTGCCTCGATGCTCAACTACTCCATCACTAATCAGCTGGGCTATGAGTTGCATTTGGACGACTCGGAAACGGATGAGGAGGGCAAACCTCCGGGAGTACCTACTCACTACACTTGCGGCATGTGCCAGCTGCGTTGTGTGCGCAAATATGAGCTCTACCAGCACCAGCAGGCAATGCATCGACTGGAACGCATTGCCGAGGGATGTGATAAATGCATCTACAAGAGCGTTTCAACCGATCTGATTGCCTATCATCGTCGTGTGCTGTGTGATAACAcagaaaagaaatttaagtGCGTTAAATGTGGCTACAAGTTCATGTGGGAGACGAACTTGTTGCAACACATCCAGCTGCAACATCCCAGCAACGACAATCAGCAGGTGGAGGAGATACCACAATCGCTGGAGTTGTCTGCAGCTGAAGGTCAGGTCTTTCAGTGTGGCCAGTGTCCACGGAAATACAATCGCAAGGATCGGCTGACAGCACATGTTAAGAAGTGCCATGCACCAGGAGCCGTGAGCCCAACGATAGGAAATGCACCCAAAGCAGCAAAGGCTGCAGCAACTGTGGCTAAGCAGCACAAAAGTTTCCTCTGTGCCTTTTGCGGCAAGGCGGTCAGCTCCTCATCGAATCTCATCATACACATACGTCGGCATACCGGCGAGAAGCCATTCAAGTGTGACTTCTGCGACATGGCGTTTCCTCGCTCCTCTGATCTGCAGTGCCATCGCCGCACACACACTGGAGAACGACCCCATGTTTGCACTGTGTGCCAAAAGGGATTCGCCCGCTCCTacaagctgcagcagcacatGCGTATTCACAATGGTGAACGTCCCTACAAATGTACCTATTGTGATAAGAGTTTCACCCAGTCCAATGATCTAACGTTGCACATACGACGGCACACGGGTGAGCGACCTTATCAATGTGAAACGTGCGGGGAACGCTTCATTCAGGGCACAGCACTCAAGAATCATAGACTACAGAACGGACATTTCGAAACCTCAGATTCCttggctaaaaataattag
Protein Sequence: MLPTDICRTCALHNVKLLALSTRNAKYANKSWCDILYELTQNDPLMEQLDDNLPQYLCDDCLRKLEDAYAFVLQARQVHEQLLHKLHKNLQCLDEAPIDIATNEIKSETDLALEQIDNAAAALDVAGGEAIAATLKIQPESDSDSNVGETESFEARGNVLDLKPTQLRRSNRKPKLATDSENEETSDLKAMPLKRRRGRPARVSKNEVINKDGRHACDVCGKTFSWHRDMQRHARVHYEQAAYECDTCGKRFLRKDKYTFHLRSHEKRQAKHAPTTLPQGDEWRFAERLYSSARLKRIECKLCDLKCQRIQELREHLTNHHVNIESLCNLSNNSDVIREHFDSQASNLEQIKQQVCSEIATGSDQLDKYCVIINAHGYELSLNDSDEELADTTPAYQCLSCNISFTRKHHLIRHTLEEHNQTPLHRCNTCQIGFVCETLLEQHQRTQCQNQLKRHSCPNCPGKFIWLQNLKQHGCLKKTDQERQFQCCLCDEQLHSMSALRSHLLQHGDGASGIDANQTAAYFRSNYPDGVTCSQEELSTRISNDFKVQDYGQYFNACSGSGRELDFFASDTELSDVEQLTTSTSALHSCTLCGVATARLAQLLRHQEDRHSDVTNYLPHVCNKCGLGFVAESLLQQHLRRICDKRHANFHCEPCNLHFIWQTNYERHMAIKHDVNTEEDQEQTHNTRLRSKRQQAAKLQCNQCEKVFIWPKDLTRHKRIHQPQTSAQFECSFCERKFHRKDGLKSHLRVHGEQQLEVPLAPVEQMDASVLQRMPAVLTQLCRPNGCKQIQCMICLSQHTKISDLRAHLMKHQISVEFVGERAKPESILSISRGLYPELATPLDKQQLIERIQRDLGKGIELERFVSITNEAAIELSLDSSETETDSDSTESQQTDTGRQYNCDLCQVQLTRKHQLYAHQLQQHTWQEATLVCSHCQAKFVNEQLLEHHYRTLCRNAQKRFLCRKCPLRFRWRDNLKLHIDVAHQEAAGSQSSIQGIQLNTTSLLPIVSYDCQECNRSFKMQKDLTRHTLLHAQDSSIYRCRWCARRFYRETNLLQHIERHGINAAQLPYAEAILNASRHPHGQKCIQCKVCDMRFPTIALLRTHLMSTPNGSHHDVASMLNYSITNQLGYELHLDDSETDEEGKPPGVPTHYTCGMCQLRCVRKYELYQHQQAMHRLERIAEGCDKCIYKSVSTDLIAYHRRVLCDNTEKKFKCVKCGYKFMWETNLLQHIQLQHPSNDNQQVEEIPQSLELSAAEGQVFQCGQCPRKYNRKDRLTAHVKKCHAPGAVSPTIGNAPKAAKAAATVAKQHKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDFCDMAFPRSSDLQCHRRTHTGERPHVCTVCQKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCETCGERFIQGTALKNHRLQNGHFETSDSLAKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00589669;
90% Identity: iTF_00562595;
80% Identity: -