Dneu016699.1
Basic Information
- Insect
- Drosophila neutralis
- Gene Symbol
- gata4
- Assembly
- GCA_035044385.1
- Location
- JAWNME010000535.1:5255884-5261070[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.69 1.7e+03 -1.2 0.0 21 29 37 45 31 47 0.77 2 2 3.5e-17 8.4e-14 51.0 3.0 1 35 318 351 318 352 0.98
Sequence Information
- Coding Sequence
- atgtataataatgTACCACATAAGTATCGTCAAGTTTGTCGATTGTGCCTCACATTGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTACCCTTCCGTTGTGTGCCGTGACTGCCGAATTAAACTCGAATCATTTTGGAAGTTTCGCAACATGGCACTGAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCCTCTAAACTTAATTCAAACGATTTGGAAATGAAACTGGATGCAATTTTAAAGTCTTCATCGGAGGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCCTCAAAAACAAGATACAGCCAACGGCAACCGACACTTGATGGTATTTTGAGATCGAATGAGGAGAAGGAACagcatcaaattaaaatcgaaaatcagATCAAGGAGTTTCAAACGCCTTTAatctattcaaatttTATTGCATCGTGTCTATCGGACTCCGAAGATAGTTCCgattcaaataaattagaaatggACATAGCACGGAGAGCGGAGACACCGGAGAGCGTTAGTTCAGATCATGCAACAGATGCGGCAACCACTCAACTATGGCAGGCATTAGCTCGATCGGCAGCTAAAAATAAAGATGAGAGTCGAGCAACGCAAATTCTGCGAAATATGATGAGTCAATCATTTGTATTTCCGACGCCGTCAACTATAGCATTGACAAAAGTACCTGTAGAGCCAATACCACTTTTGAAGGACATGTCCGAATCGCAATCGAATGTTGTTAAAATATGTCGAAGAAAGCAAAGTTTTCCAACTAAATCTGATTGCGTCGATGCTCCAGATGTTAAGGTGGCCGGCACCTTTGTTCGTTCAGAAACAACAATTACCGACGGAATCAAAGATAAAAAgAGCCTAAAAtgtatcagcagcagcacagcttTATCCAGTTCTCAAAAGGATATGTCCTGCTCGAATTGTGGTAcgctgacaacaacaatatggaGACGCAGCGCCCGTGGCGAAATGGTTTGCAACGCCTGCGGATTATACTTCAAGCTGCATGGCGTCAATCGACCACATTCGATGAGACGCGATACGATTCATACTCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCCAagaaaaGAAACAGGCAACTAGCATGCAGCTCGGCGGTAGAATATGAGACGGATATCATAAATAGCTCTATAGAATGCAAGAAGCCGGACTTGTCATTATGTCAAGAGACGCCCACTTTCTCAGATTCAGTATTTAACaAATATAAAACGGAAATAGCTGAGACAGCAGGAACGGCCGAAACACTCAAAGAtgttattttaaaacaaacaaaatcacaaTCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MYNNVPHKYRQVCRLCLTLIFNCLSIKPLPNDSYPSVVCRDCRIKLESFWKFRNMALNSHYALREFLTLSESSKLNSNDLEMKLDAILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILRSNEEKEQHQIKIENQIKEFQTPLIYSNFIASCLSDSEDSSDSNKLEMDIARRAETPESVSSDHATDAATTQLWQALARSAAKNKDESRATQILRNMMSQSFVFPTPSTIALTKVPVEPIPLLKDMSESQSNVVKICRRKQSFPTKSDCVDAPDVKVAGTFVRSETTITDGIKDKKSLKCISSSTALSSSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACSSAVEYETDIINSSIECKKPDLSLCQETPTFSDSVFNKYKTEIAETAGTAETLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00521812; iTF_00597809; iTF_00560698; iTF_00502182; iTF_00513843; iTF_00576725; iTF_00616569; iTF_00517371; iTF_00535715; iTF_00565032; iTF_00497803; iTF_00583339; iTF_00499250; iTF_00570770; iTF_00482645; iTF_00557559; iTF_00610302; iTF_00498528; iTF_00499960; iTF_00596316;
- 90% Identity
- iTF_00607479;
- 80% Identity
- -