Dneo013203.1
Basic Information
- Insect
- Drosophila neoperkinsi
- Gene Symbol
- Gata4
- Assembly
- GCA_037043555.1
- Location
- JBAMBG010008340.1:29630-34977[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.87 1.7e+03 -1.3 0.0 21 29 37 45 31 47 0.77 2 2 4.4e-17 8.9e-14 50.8 3.0 1 35 369 402 369 403 0.98
Sequence Information
- Coding Sequence
- atgtataataatgTACCACATAAGTATCGTCAAGTTTGTCGATTGTGCCTCACATTGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTACCCTTCCGTTGTGTGTCGTGACTGCCGAATTAAGCTCGAATCATTTTGGAAGTTTCGCAATATGGCACTGAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATTCAAACGATTTGGAAATGAAACTGGATGCAATTTTAAAGTCTTCATCAGAAGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCCTCAAAAACAAGATACAGCCAACGGCAACCGACACTTGATGGTATTTTGAAATCGAATAAGGAGAAGGAGCagcatcaaattaaaatcgaaaatcagATCAAGGAGTTTCAAACGCCTTTAATCTATTCTAATTTGTACGAAATGCCAACTCAACCAACTGTCAACACAATTGAGCGCGATGCAATAATGAATCAGAAACCAGATACCAGCAGTATAGCATCCAAACTGAAATTATCGGATGGATATATGGAATTAGATAACGGTGTGaaTACCGACAGTATTGCATCGTGTCTATCGGACTCCGAAGACAGTTCcgattcaaataaattacaaatggaCATTGCATCGACGATGTACGATCGCAAGACACCGGAGAGCGTTAGTTCAGATCATGCAACGGATGCGGCAACCACTCAACTATGGCAGGCATTAGCTCGATCGGCAGctaaaaataaagatGAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCGACGCCGTCAACTATAGCATTGACAAAAGTACCTGTAGAGCCAATACCACTTTTAAAGGACATGTCCGAATCGCAATCGAATGTTGTTAAAATATGTCGAAGAAAGCAAAGTTTTCCAACAAAATCTGATTGTGTCGATGCTCCAGATGTTAAGGTGGCCGACACCTTTGTTCGTTCAGAAACAACAATTACCGAAGGAATCAAAGATAAAAAgAGCCTAAAATGtataagcagcagcacagcttTATCCAGTTCTCAAAAGGATATGTCCTGCTCGAATTGTGGTacgctaacaacaacaatttggagACGCAGCGCCCGTGGCGAAATGGTTTGCAACGCCTGCGGATTATACTTCAAGCTGCATGGCGTCAATCGACCCCATTCGATGAGACGCGATACGATCCATACTCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCCAAGAAAAGAAACAGGCAATTAGCATGCAGCTCGGCGGTAGAATATGAGACGGATATCATAAATAGCTCCATAGAATGCAAGAAGCCAGACTTGTCAATATGTCAAGAGACGCCCACTTTCTCAGAATCAGTATTTAACaaatataaaaCGGAAATAGCTGAGACAGCAGGAACGGCCGAAACACTCAAAGatgttattttaaaacaaacaaaatcacaaTCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MYNNVPHKYRQVCRLCLTLIFNCLSIKPLPNDSYPSVVCRDCRIKLESFWKFRNMALNSHYALREFLTLSESSKLNSNDLEMKLDAILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKEKEQHQIKIENQIKEFQTPLIYSNLYEMPTQPTVNTIERDAIMNQKPDTSSIASKLKLSDGYMELDNGVNTDSIASCLSDSEDSSDSNKLQMDIASTMYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPTPSTIALTKVPVEPIPLLKDMSESQSNVVKICRRKQSFPTKSDCVDAPDVKVADTFVRSETTITEGIKDKKSLKCISSSTALSSSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACSSAVEYETDIINSSIECKKPDLSICQETPTFSESVFNKYKTEIAETAGTAETLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00559150;
- 90% Identity
- iTF_00517371;
- 80% Identity
- -