Doch013017.1
Basic Information
- Insect
- Drosophila ochracea
- Gene Symbol
- pnr
- Assembly
- GCA_035044125.1
- Location
- JAWNML010000061.1:2987704-2992989[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.2 4e+03 -2.6 0.3 16 31 6 21 3 26 0.70 2 3 2 3.6e+03 -2.4 0.0 22 28 56 62 50 64 0.75 3 3 4.9e-17 9.1e-14 50.7 3.8 1 35 364 397 364 398 0.98
Sequence Information
- Coding Sequence
- atgtataataatgtACCACATAAGTATCGTCAAGTTTGTCGATTGTGCCTCACATTGTACAACAATCAAGAGCATAAAGATGATTCATCAACGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTACCCTTCCGTTGTGTGCCGTGAATGCCGAATTAAGCTCGAATCATTTTGGAAGTTTCGCAATATGGCACTGAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATTCAAACGATTTGGAAATGAAACTGGATGCAATTTTAAAGTCTTCATCGGAAGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCCTCAAAAACAAGATACAGCCAACGGCAACCGACACTTGATGGTATTTTGAAATCGAATAAGGAGAAGGAGCAccatcaaattaaaatcgaaaatcaGATCAAGGAGTTTCAAACGCCTTTAATCTATTCTAATTTGTACGAAATGCCAACTCAACCAACGGTCAACACAATTGAGCGCGATGCAATAATGAATCAGAAACCAGATACCAGCAGTATAGCATCCAAACTGAAATTATCGGATGGATATATGGAATTAGATAACGaaatggACATTACATCGGCGATCTACGATCGCAAGACACCGGAGAGCGTTAGTTCAGATCATGCAACAGATGCGGCAACCACTCAACTATGGCAGGCATTAGCTCGATCTGCCGctaaaaataaagatgAGAGTCGAGCAACGCAAATTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCGACGCCGTCAACTATAGCATTGACAAAAGTACCTGTAGAGCCAATACCACTTTTAAAGGACATGTCCGAATCGCAATCGAATGTTGTTAAAATATGTCGAAGAAAGCAAAGTTTTCCAACAAAATCTGATTGCGTCGATGCTCCAGATGTTAAGGTGGCCGACACCTTTGTTCGTTCAGAAACAACAATTACCGAAGGAATCAAAGATAAAAAGagcCTAAAATGtataagcagcagcacagctTTATCCAGTTCGCAAAAGGATATGTCCTGCTCGAATTGTGGTacgctaacaacaacaatttggagACGCAGCGCCCGTGGCGAAATGGTTTGCAACGCCTGCGGATTATACTACAAGCTGCATGGCGTCAATCGACCCCATTCGATGAGACGCGATACGATCCATACTCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCCAagaaaaGAAACAGACAATTAGCATGCAGCTCGGCGGTGGAATATGAGACGGATATCATAAATAGCTCCATAGAATGCAAGAAGCCAGACTTGTCAATATGTCAAGAGACGCCCACTTTCTCAGATTCAGTATTTAACaaatataaaaCGGAAATAGCTGAGACAACAGGAACGGCCGAAACACTCAAAGatgttattttaaaacaaacaaaatcacaaTCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MYNNVPHKYRQVCRLCLTLYNNQEHKDDSSTPHITIQIFNCLSIKPLPNDSYPSVVCRECRIKLESFWKFRNMALNSHYALREFLTLSESSKLNSNDLEMKLDAILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKEKEHHQIKIENQIKEFQTPLIYSNLYEMPTQPTVNTIERDAIMNQKPDTSSIASKLKLSDGYMELDNEMDITSAIYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQILRNMMSQSFVFPTPSTIALTKVPVEPIPLLKDMSESQSNVVKICRRKQSFPTKSDCVDAPDVKVADTFVRSETTITEGIKDKKSLKCISSSTALSSSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYYKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACSSAVEYETDIINSSIECKKPDLSICQETPTFSDSVFNKYKTEIAETTGTAETLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00559150;
- 90% Identity
- iTF_00517371;
- 80% Identity
- -