Dhaw009526.1
Basic Information
- Insect
- Drosophila hawaiiensis
- Gene Symbol
- pnr
- Assembly
- GCA_037043685.1
- Location
- JBAMBA010000203.1:2333409-2338054[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 1.9e+03 -1.5 0.0 21 28 79 86 73 88 0.76 2 2 5.4e-17 1e-13 50.5 3.8 1 35 408 441 408 442 0.98
Sequence Information
- Coding Sequence
- atgcAAACGGAATCATTTTCACAATCGTGCCAATCGAATGTGGTCTACGATAATAATACAgctaatacaacaacaacagcagcagcaatagcaactcccactaaaaatatatttcttcaaAACGTGGAGTACAACAATCAAGAGCATAAAGATGATTCATCAACGCCGCACATTACAATTCAGATATTCAACTGTCTCTCTATTAAGCCATTGCCGAACGATAGTTACCCTTCCGTTGTGTGCCGTGACTGCCGAATTAAGCTCGAATCATTTTGGAAGTTTCGCAATATGGCACTGAATTCACATTATGCTTTAAGGGAATTTTTGACATTATCAGAATCGTCTAAACTTAATTCAAACGATTTGGAAATGAAACTGGATGCAATTTTAAAGTCTTCATCGGAAGCAATAGCTGCTAAGGCACTGACTGAGCTGAGCAAATCCTCAAAAACAAGATACAGCCAACGGCAACCGACACTTGATGGTATTTTGAAATCGAATAAGGAGAAGGAGCaccatcaaattaaaatcgaaaatcagATGAAGGAGTTTCAAACGCCTTTAATCTATTCTAATTTGTACGAAATGCCAACTCAACCAACTGTCAACACAATTGAGCGCGATGCAATAATGAATCAGAAACCAGATACCAGCAGTATAGCATCCAAACTGAAATTATCGGATGGATATATGGAATTAGATAACGGCGTGaatacCGACAGTATTGCATCGTGTCTATCGGACTCCGAAGACAGTTCCgattcaaataaattagaaatggaCATTGCATCGGCGGTCTACGATCGCAAGACACCGGAGAGCGTTAGTTCAGATCATGCAACAGATGCGGCAACCACTCAGCTATGGCAGGCATTAGCTCGATCTGCAGctaaaaataaagatgAGAGTCGAGCAACGCAACTTTTGCGAAATATGATGAGTCAATCATTTGTATTTCCGACGCCGGCATTGACAAAAGTACCTGTAGAGCCAATACCACTTTTAAAGGACATGTCCGAATCGCAATCGAATGTTGTTAAAATATGTCGAAGAAAGCAAAGTTTTCCAACAAAATCTGATTGCGTCGATGCTCCAGATGTTAAGGTGGCCGACACCTTTGTTCGTTCAGAAACAAAAATTACCGAAGGAATCAAAGACAAAAagagCCTAAAATGtataagcagcagcacagcttTATCCAGTTCTCAAAAGGATATGTCCTGCTCGAATTGTGGTACgctcacaacaacaatttggagACGCAGCGCCCGTGGCGAAATGGTTTGCAACGCCTGCGGATTATACTACAAGCTGCATGGCGTCAATCGACCCCATTCGATGAGACGCGATACGATCCATACTCGGCGCAGGCGTCCAAAAGAGTGCGAGAAATCCAagaaaaGAAACAGGCAATTAGCATGCAGCTCGGCGGTGGAATATGAGACGGATATCATAAATAGCTCCATAGAATGCAAGAAGCCAGACTTGTCAATATGTCAAGAGACGCCCACTTTCTCAGATTCAGTATTTAACaaatataaatCGGAAATAGCTGAGACAACAGGAACGGCCGAAACACTCAAAgatgttattttaaaacaaacaaaatcacaaTCTTTGCCTGAGTTCAATGAAACCCACGCAGGCGAGGAACTATCTGTACCTCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATACAAcgccaaataa
- Protein Sequence
- MQTESFSQSCQSNVVYDNNTANTTTTAAAIATPTKNIFLQNVEYNNQEHKDDSSTPHITIQIFNCLSIKPLPNDSYPSVVCRDCRIKLESFWKFRNMALNSHYALREFLTLSESSKLNSNDLEMKLDAILKSSSEAIAAKALTELSKSSKTRYSQRQPTLDGILKSNKEKEHHQIKIENQMKEFQTPLIYSNLYEMPTQPTVNTIERDAIMNQKPDTSSIASKLKLSDGYMELDNGVNTDSIASCLSDSEDSSDSNKLEMDIASAVYDRKTPESVSSDHATDAATTQLWQALARSAAKNKDESRATQLLRNMMSQSFVFPTPALTKVPVEPIPLLKDMSESQSNVVKICRRKQSFPTKSDCVDAPDVKVADTFVRSETKITEGIKDKKSLKCISSSTALSSSQKDMSCSNCGTLTTTIWRRSARGEMVCNACGLYYKLHGVNRPHSMRRDTIHTRRRRPKECEKSKKRNRQLACSSAVEYETDIINSSIECKKPDLSICQETPTFSDSVFNKYKSEIAETTGTAETLKDVILKQTKSQSLPEFNETHAGEELSVPLNLVSSENNAKLTYNAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00559150;
- 90% Identity
- iTF_00570770; iTF_00513843; iTF_00576725; iTF_00557559; iTF_00616569; iTF_00502182; iTF_00596316; iTF_00498528; iTF_00499960; iTF_00565032; iTF_00583339;
- 80% Identity
- -