Basic Information

Gene Symbol
hang
Assembly
GCA_035047585.1
Location
JAWNPJ010000015.1:408297-422262[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.33 26 5.6 1.0 3 23 640 661 639 661 0.93
2 19 0.42 33 5.3 3.2 3 22 769 788 767 788 0.89
3 19 0.00071 0.056 14.0 3.3 1 22 892 913 892 915 0.90
4 19 0.055 4.3 8.1 0.1 2 21 927 946 926 947 0.93
5 19 0.00082 0.065 13.8 0.2 2 23 1078 1100 1077 1100 0.95
6 19 0.0024 0.19 12.4 0.1 1 23 1108 1131 1108 1131 0.96
7 19 1.9e-05 0.0015 18.9 0.1 2 23 1223 1244 1222 1244 0.97
8 19 0.00034 0.027 15.0 2.9 2 23 1328 1350 1327 1350 0.97
9 19 0.027 2.1 9.1 0.2 2 23 1359 1381 1358 1381 0.95
10 19 0.00094 0.075 13.6 0.2 1 23 1394 1417 1394 1417 0.97
11 19 0.00015 0.012 16.2 1.1 1 23 1478 1500 1478 1500 0.99
12 19 0.0023 0.18 12.4 0.9 1 23 1508 1531 1508 1531 0.96
13 19 0.9 71 4.2 0.3 2 19 1539 1556 1539 1557 0.93
14 19 3.1e-05 0.0025 18.3 0.4 3 23 1665 1685 1664 1685 0.98
15 19 0.006 0.47 11.1 0.1 1 23 1722 1744 1722 1744 0.97
16 19 7.3e-05 0.0058 17.1 0.6 2 23 1835 1857 1834 1857 0.93
17 19 1.6 1.3e+02 3.4 0.1 2 20 1877 1895 1876 1897 0.91
18 19 0.0078 0.62 10.7 0.4 3 23 1912 1932 1912 1932 0.98
19 19 0.00012 0.0096 16.4 2.1 1 23 2227 2249 2227 2249 0.98

Sequence Information

Coding Sequence
atgtgcGACGctacggcagcagcagcaaccacaaATCCTGTGGGAAGTGATGCTGCAGCCGCGATTCCTGGAACTGCGACGACGGCAGTGGCAGGAGGTGGTGGAACAGTAGCACCACCAGTGCCACCAGCAGTACCAGCTATAACCACATCGCCCATGGCGACTACAActacatcatcatcatcatcatcctcgACCACAACCACAACCACATCGTCATCAGCGACgacatcgtcgtcgtcgtcgtcgctgaAGATCGAGAAGCGACAAAACTGCTGCCGACTGTGCATCGCCCCCGCCTCGGAGTGCATCTCGATCATGAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCGCAACTGCGTCAACATCAAGATCACGCCCCAGGATCGGCTGTCCTTGCAGATATGCCATGCCTGCATCAGCTACCTCAACTCGTGGCAGAGCTTCAAGAACCGCTCCCTCATCTCCCAGACCAAGCAGCGCCAATGGCTGGAGGCGAACAACAGCAGTAGCCACAAGAGCAAGCTGCTCAACTACCTGGACCTGAACAGTGCCGAGAACGGCTCTGCCActgatcatcatcatcatcatcagcatcctccccagcagcagcagcgtcagaaccagaaccagaaccagatccAGGAGAATGAGGACGAAACGGACAATGCATCGATGCCAGGAGCGGCAGCCACAGCGGCTGCCATTCTGGACGGCATACCCTCGCTGAAGAAACGAAAATCTCTAACAGTCTATGTGAGTCCTAAACCGCAACAGTTGCCGCAACAGCAGTTGCAACAGTTGCCACCACCACCGTCGGTagcaccacctccaccaccaccatcgtcctcgtcgtcgtcgatgaccagcagcagcaacagcgccGCTCAGCACAGTCTGCAGACCCTGCTCCTGCAAGtcccaggagcagcagcagcagcatcggtTGCAAGCTCTTCCTCCACCGCCACCACAACAGCATCCATGTCCGCTTcccaacaccagcagcagcagcagcagcatcgggAGCAGAAACAGCACAGGCAGTATCGGAGGCATCACCACCATCACCTGCAACAGCAGATGCACCTCCAGCGAGGGAGGCAGATGGGTCAAcatcatcaccaccaccaccacttcCAGCAGcatccgcagcagcagcaacagcggcatCATCCGCATCCGCCGGGTCAGCGCCGCCAGAGGCAGTCCCGTCCCCAGGGAAGGCACAATCTGACGACCAACTCCTCGACTGGTGCCTCCGGAACGCTGCGGAAATTCAAGCCGAAACTGTACTTGCCACTGGATATCGCGGTGCCACCACTGCCGCCGCTGCCCGTGACTGCTCCCGCTGCCGTTGCTCCTCCTCCGTCTGCTCTTTCCGTACCACTCACCCTTCCGCCCcctcctccgccgcctcctgctgctgccgccgcacCTAATCCGCCATCCGCTGTCGTGGCTGGCGGCAGGGAGAGCTTGTCGCTGGCACTGCCGCTCGATTTCAGCCAAGctagctgcagcagcagcaatcgcCTGTCcggcctcctcctccagcaacAGTCGGCTGGCGCATCTAGCGCTGTGGCAACCACCATTGCAACTCCAACTGCATCGGCCACTGCGACTCCATTGCTgatgccgCCACTGCCAGCGGTGCCCATCAAAGATGAGCCCATCGACACGGATGACGACTACCAGATGAAGTCGATCGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGACATGCCGTTGATGACCTCCGACTACGACTACACGGCTCAGCATGGCGTGAACGCCGCCTCGGCAGCCGCCTCCCTGCCGCCCAATGCCGTCGCCAATGTGGCTGCCGCCGGCGACTCCAAGGTGGCCAGCTGCCGGGCCTGCAGTCTGCAGTTCTCCACGCGCGCCAATGCCCGCCGCCACGAACGCAACCTCCACCCGAATCTGTTCCAGCTCTCCACAGACTCGCCACATAATACGCCGATTACCAAGCCGACGCCCGCTCTGGCCGCCGCTTTGGAGATCCAGCGGGCAGCGGCGGAGGCAGCCACCGCCGAGGCTAACCGGGCAGCTGGAGCGGCGGGCGGGAACATCTCCACCCAGAAGTACCGGCAGGTGGTGATGAATGCGTTCATCAAGTGCGAGGGTGGGGGCTATGACTACGACAACCCGGAACAGTACCGGGCGCACCTCACCCGCGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTGGAGCAGTACCAGACGATGACGTGCCGGTGCTGCAACAAGTACTTCAGCACCTACAAGAACTTCATGGCCCACGTCCGCAAGAAGTACCCGCTGCTGCCCCGCAACCTCTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCCCTGTTCATCTCCCACTTGAAGAAGCGCAACTGCATCAACCTGTACCGCGTCCTGCACGGCATCCGGGAGAAGGCCAATGCAGCAGTGTCCAAGGATTGTGTAGAGACGGGCGATGGGCGGGTGATGACCCACTTGGATGCCGGCTCCAGTCCGAATGTCACGGGCGGCGACCACCTCATCTCGGGCGCTGGGGGATCGGAGCGGCCGGAGAAGCTGCGGGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGTCCGAAGGGCTTCCGGACCAAGCACGAGTTCCGGACGCACGTCTACGACAAGCACGCCGACGTCCAGCGGAAGGACAGCAACTCGATCCAGTGCAACTTCTGCGGCCTGGACTTTGCCGATCCGGTGGACAGGCGGCGCCACTACAACAACATGGACTGCATCGTCCGGCTGCGCTGCATGACGTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGAGCACGTCTACCAGGACCATTTGGGCGGGGTGGGCGGCGGCACTGGGACAGGCGGCGCCAGCAGCGACAACGCCTCCACCACCGGCAACAGCATGGAGCACTCGCCGGGCAAGCGAAGTCTCCTCAGTGCCCTCGGCATCGGTGTGGGCTCCTCGGCGGACGAGTCGCGCAGCAGCAGTGTGGCCCTTGGCCCCATGACCTCCACCCCCAAACCGGCCGGCGGTACTGCCTCTGGAGCCAACCCTTCCAGCAGTCGAGATGCCAACAGTGGCGGTAATGGCTCGGCTCCCAAGTCCCAGTACTTCTCCCGCATGCCGCAGGTCTGTCCCATTTGCGGCCAGCAgtacaacaactacaacaacgtGCTCCGGCACATGGAATCGAAGCATCCGAACAAGCTGCCCGAGACGTACAAGTGTGTGCGGTGCGGCCTGGGCTATCCGAGGATCTCCTACCTGCGGGAGCACATGATCAACGTCCATGGCGTGGACAAGAACCGGCACTCCGGCGGCTTCGAGTACATCGTCAACGCGGACGCAGTGAAGCTGGCGGACGGGAGCACACCGAACGTGTACACGGGTCGCTACGACTACGTGATGAAGGACCTCATGTCGATAACAAATGGTGGGACCCTCGatgacgacgacgaggagccGGCCAGCGTGGCCAAGAAGATGCGCCTGgacgacagcagcaacaacagcagcctGGCCGGCGTTGGAGTCTccaaccagcagcagcagcagcagcagaaggagTGTCCCATCTGCAACGCCGTCTTCAGCAACAACATCGGCCTCTCCAACCACATGCGCTCCCACTACACGGCCTCCAATTCGGTGAACGCCGCCCTGACGGCGGCCAATCGGATGACGCCCAAGTCCCTGACCATCACGGCCACTCCGGCCGACACCACCATGGAGCTGCTAAGTGGCGCAGCTGCCTCATCCGCTCCAGCGGCAGGAGGAGCTGCGGGAGTGCCCCCGGCGATGGCCAATCAGACGCCGCAGGAGCAGGCCGTGTTCCGGCGCAGTCTCGACCAGGCGGCCGACCGACGCTTCCGCCGGATGCGCTGCCGCATCTGCCAGCGGCGGTTCAGCTCGAAGAAGTCCTACCGCTATCACATGCTCACCGACCACCAGGTCCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAACGCGGAGTTCGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGGCGGGCCATCAAGGACGAGATGATCGTGAAGCAGTTCGAGTGCGAGGTGTGCTCGATCGTCTACAGCTCGGAGATGGAGCTGCAGCAGCACAAGCGTAGTGTCCACAAGATGTCCTCATCGGCAGCAGCAGTTTCAGCGGCAGcagccacctcctcctcctccaaaATGGACGACGACAGCATAGTCGTGGATGACAGCACCCTCAAGCCGACTGGCGGCGAGCTGACAGACACCTCCGTGAACGTGTCGGGTGCGGGCGGAGGATTGAGCACGCCGCTCTACTGGTACCAGTGCAAGTACTGCCCCTCGAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCCCATGACGAGTTCGATTCCAACGACTACTCCTGCAAGGACTGCGGGAATGTCTACAGCGGGAGGAAGAGTCTATGGGTACATCGCTACAAGAAGCATCCGCAGGTCCCTGATCCGGCCGAGTGCTCGCTCTGCCGAAAGATCTTCTTCGACCGCCAGATGCTGGACAACCACACGCCGACGTGCAACCGGAAGCCCATCACCTCGACCGGCGCCCACCAGCAGcacctccagcagcagcagcagcagcagcagcaacagaaacagatgCAGGAGGCACTGCATCAGCAGCAGATGGCCCTCCAGAAGCAGTTGGGCCTGCACTCTGGGGTGTTCCGGCACAAGACCggcgacgatgacgacgacgaggacgaggatgagCAGCATCCGAAGCTGGGCGATGACAGTGGAGCACCTGCTCcggctcccgctcccgctccagcTCCGGCCAGCACGACGGCAGCTGCTTCGATCAAGATACGCATTCCAGAGGTGGCGTGCACCATATGCGGGGCCCGCTTCACCGACCAGGAGATGTTCACCAAGCACATCCAGAAGCACGAACAGGAGCTCTATGTGGACAATCCCCTGGCGGCGATGTTCGACGATGGGCCGCCGGACGCCGGCCAGTTCCAGGTGGAGCTGGAGAAGCAGAACGAGAACGGGGAATACGCGTGCGATCTGTGCGCCAAGACGTTCCCCCAGGTCATAGCACTCAAGGTGCACCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCGACGGCGAAGCGACACATTTgaccaacaacaaccaccacaccaccagcaacaacaacaacaacaacaacaatcacagcagcagcaacaacaacagctcaATGTCGCACCTCCGGGAACTTCATGCTGTGGGTCTGATACCCAACAACCAACCACAGGGACAATCCCAACAGTTGCAGCAtccccaccagcagcagcaacagcagcaggcggGCAAGTCGATGAAGCGGAAGCGTGAACTAAAGTGCGAGTACTGCCCCTCGACCttcatcagcaacaacaacctgCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTGAGCAACCTGCCGGAGCCGCCGGTCATCGTGGTGGACGACCATCTCTCCTGCCGACGTTGCAACCTCAAGTTCGAGACGAAGGAGCTGTGGATCGATCACAAGCTGGCGGACGCCAAGGTGGTGCGACCGTTCTGCCCCTTCCAGTGGGGCTGTGATCTGTGCGGCGAGTACCTCTCTCGCAAGGAGAAGCTCATGAATCACATCAACAACCATCTCAAGGAGGAGGTGATTGTGCCGGTGGCCACCAAGGAGGCGGCAGAGAGGGCGGCGGCGCTGAAGCCCCAGGAGgtggaagcagcagcagcagtagcagaaTCCACCGCCAAGACGGAGGAGATCAAACACGAGGCGGAGGGCAAGACGGAGGGGAAGACCCAGCCGGACAGCGATGATCTGGACGAGGAGGACAGCTCCGGCGAGGAGGAGACCTCTGGCACgggcgacgacgacgaggaggaggacgacgatgatgatgaggagGATGACTCGGAGGAGGATGTGGAAGACGAGGAGGGCGACGGCGGCGAGGGCGAGGACGAAGAAGGCGTCCCCCCGCAACAGCCGCCGAAAATGAACCTCGCCCAGGACGATGACCTGGTGGAGGAGGTCCTCAGCTCAGACGACGATGTGGAGAGCGACGACGTCGACGAAATGGAGGAGGATGACGACGAGGACGtcgaggatgaggatgaggaggaggatgacgaCGTGGAAGATCCCCAGCCGGTGGTGATGAACGGCAAGGCGAAGATGCAGCCACTCATTGTGGCCACTTCGgatgaggaggacgaggacgaggaggaggatggtATGCTGCCCATCGAGGACATTATCGAGGAGGAGTTTGACGAGGACGCGGCCGATCCAGAGCCCGAGGACGACATTGTCGAGgaagaagaggaggaggaggaggaggaggaggaagaggaggaggtaATCGAAGAGGTCGAACTCGACGACGACATGGACGAGGTGGGGAACGAAAGGCGCAACTCCTCGTCGACCAGTGAGtcggccaccaccaccaccgccaacACAACCACGTCGCAATCACATTCCACGGGTGAGCGGCACAAAAAGCCGGTGGTGCCAGGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTCCAGAGCCACATCAAAAGCCATTTTCTGAATGGTCCAAAGCTGGCAAGAGCCAAGGTGGTAGCAGGAGgagcaacaccaccaccaccaccagcagaaGCAGTATCCTTGGCAACGGAACAGGACTCAAAGACGACAGCGAGGACGTCGGTCAGTACGAGTAGCACCACCAGCAGTAGTAGTAAGCCAGCAGGTGCCACAGTTGTCCTCCATCTCACTTGA
Protein Sequence
MCDATAAAATTNPVGSDAAAAIPGTATTAVAGGGGTVAPPVPPAVPAITTSPMATTTTSSSSSSSTTTTTTSSSATTSSSSSSLKIEKRQNCCRLCIAPASECISIMNSYAADKEPLSTKIRNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRSLISQTKQRQWLEANNSSSHKSKLLNYLDLNSAENGSATDHHHHHQHPPQQQQRQNQNQNQIQENEDETDNASMPGAAATAAAILDGIPSLKKRKSLTVYVSPKPQQLPQQQLQQLPPPPSVAPPPPPPSSSSSSMTSSSNSAAQHSLQTLLLQVPGAAAAASVASSSSTATTTASMSASQHQQQQQQHREQKQHRQYRRHHHHHLQQQMHLQRGRQMGQHHHHHHHFQQHPQQQQQRHHPHPPGQRRQRQSRPQGRHNLTTNSSTGASGTLRKFKPKLYLPLDIAVPPLPPLPVTAPAAVAPPPSALSVPLTLPPPPPPPPAAAAAPNPPSAVVAGGRESLSLALPLDFSQASCSSSNRLSGLLLQQQSAGASSAVATTIATPTASATATPLLMPPLPAVPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLMTSDYDYTAQHGVNAASAAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAEAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQYRAHLTRDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHGIREKANAAVSKDCVETGDGRVMTHLDAGSSPNVTGGDHLISGAGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCNFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVGGGTGTGGASSDNASTTGNSMEHSPGKRSLLSALGIGVGSSADESRSSSVALGPMTSTPKPAGGTASGANPSSSRDANSGGNGSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEPASVAKKMRLDDSSNNSSLAGVGVSNQQQQQQQKECPICNAVFSNNIGLSNHMRSHYTASNSVNAALTAANRMTPKSLTITATPADTTMELLSGAAASSAPAAGGAAGVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKMSSSAAAVSAAAATSSSSKMDDDSIVVDDSTLKPTGGELTDTSVNVSGAGGGLSTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQHLQQQQQQQQQQKQMQEALHQQQMALQKQLGLHSGVFRHKTGDDDDDEDEDEQHPKLGDDSGAPAPAPAPAPAPASTTAAASIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPPDAGQFQVELEKQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHLTNNNHHTTSNNNNNNNNHSSSNNNSSMSHLRELHAVGLIPNNQPQGQSQQLQHPHQQQQQQQAGKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLSCRRCNLKFETKELWIDHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKEAAERAAALKPQEVEAAAAVAESTAKTEEIKHEAEGKTEGKTQPDSDDLDEEDSSGEEETSGTGDDDEEEDDDDDEEDDSEEDVEDEEGDGGEGEDEEGVPPQQPPKMNLAQDDDLVEEVLSSDDDVESDDVDEMEEDDDEDVEDEDEEEDDDVEDPQPVVMNGKAKMQPLIVATSDEEDEDEEEDGMLPIEDIIEEEFDEDAADPEPEDDIVEEEEEEEEEEEEEEEVIEEVELDDDMDEVGNERRNSSSTSESATTTTANTTTSQSHSTGERHKKPVVPGFTCDLCQLCFDSQELLQSHIKSHFLNGPKLARAKVVAGGATPPPPPAEAVSLATEQDSKTTARTSVSTSSTTSSSSKPAGATVVLHLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-