Datr000906.2
Basic Information
- Insect
- Drosophila atripex
- Gene Symbol
- hang
- Assembly
- GCA_035045925.1
- Location
- JAWNOP010000009.1:1680502-1694425[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.33 26 5.6 1.0 3 23 693 714 692 714 0.93 2 19 0.42 32 5.3 3.2 3 22 822 841 820 841 0.89 3 19 0.00071 0.055 14.0 3.3 1 22 944 965 944 967 0.90 4 19 0.055 4.2 8.0 0.1 2 21 979 998 978 999 0.93 5 19 0.00082 0.064 13.8 0.2 2 23 1132 1154 1131 1154 0.95 6 19 0.0024 0.18 12.3 0.1 1 23 1162 1185 1162 1185 0.96 7 19 1.9e-05 0.0015 18.9 0.1 2 23 1277 1298 1276 1298 0.97 8 19 0.00034 0.026 15.0 2.9 2 23 1382 1404 1381 1404 0.97 9 19 0.027 2.1 9.0 0.2 2 23 1413 1435 1412 1435 0.95 10 19 0.00094 0.073 13.6 0.2 1 23 1448 1471 1448 1471 0.97 11 19 0.00015 0.011 16.1 1.1 1 23 1530 1552 1530 1552 0.99 12 19 0.0023 0.18 12.4 0.9 1 23 1560 1583 1560 1583 0.96 13 19 0.9 70 4.2 0.3 2 19 1591 1608 1591 1609 0.93 14 19 3.1e-05 0.0024 18.2 0.4 3 23 1715 1735 1714 1735 0.98 15 19 0.006 0.46 11.1 0.1 1 23 1772 1794 1772 1794 0.97 16 19 7.3e-05 0.0057 17.1 0.6 2 23 1883 1905 1882 1905 0.93 17 19 1.6 1.3e+02 3.4 0.1 2 20 1925 1943 1924 1945 0.91 18 19 0.0078 0.6 10.7 0.4 3 23 1960 1980 1960 1980 0.98 19 19 0.00012 0.0093 16.4 2.1 1 23 2279 2301 2279 2301 0.98
Sequence Information
- Coding Sequence
- atgtgcGACGCTAccggagcagcagcatcagcagcaaccaCAAATCCTGTGGGAAGTGATGCTGCAACAACGATTCCTGGAACTTCATCATCATCTGCGACGACGGTAGCAgtggcaggaggaggaggaggagctgttGGTGGAACAGTAGCACCATCAgtaccaccaccagcaccagcagctgcTATAACCACATCGCCCATGGCGACTACAACTACATCATCCTCGgccacaaccacaaccacaTCGTCATCATCAACGACGATGTCGTCGGcggcgtcgtcgtcgtcgtcgtcgctgaAGATCGAGAAGCGACAAAACTGCTGCCGACTGTGCATCGCCCCCTCCTCGGAGTGCATCTCGATCATGAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCTCAACTGCGTCAACATCAAGATCACGCCCCAGGATCGGCTGTCCTTGCAGATATGCCATGCCTGCATCAGCTACCTCAACTCGTGGCAGAGCTTCAAGAATCGCTCCCTCATCTCCCAGACCAAGCAGCGCCAATGGCTGGAGGCGAACAACAGCAGTAGCCACAAGAGCAAGTTGCTCAACTACCTGGACCTGAACAGTGCCGAGAACGGCTCTGCCTCtgaacatcatcatcatcatcatcatcatcctcaccagcagcagcagcagcagcagcagcgtcagaaccagaaccagcagcagcagcagcacgtcCTGGATAATGAGGACGAAACGGACAATGGATCGATGCCAGGAGCGGCAGCCACAGCAGCTGCCATTCTGGACGGCATACCCTCGCTGAAGAAACGAAAATCTCTAACAGTCTATGTGAGTCCTAAACCGCAACAGTTGCCgcaacaacagttgcaacAGTTGCCACCACCATCGTCGGTACCACCACCACTACTGCCAccatcgtcgtcgtcctcgtcgatgaacagcagcagcaacagcgccGCGCAGCACAGTCTGCAGACCCTGCTCCTCCAAGtcccaggagcagcagcagcagcagcatcatcgGTTGCAAGCTCTTCCTCCACAGCCACCACCACAGCGTCCATGTCCGCTtcccaacagcagcaacaccagcagcagcagcatcgggAGCAGAAACAGCACAGGCAGTATCGGAGGCATCACCACCATCACTTGCCACAGCAGTTGCGCCTCCAGCGCGGCAGGCAAATGGGTCACCAACATCACCACCGCCATCACTTCCAGCAGCAGCtcccccagcagcagcagcagcaacagcaacagcggcatCATCCGCATCCGCCGGGCCAACGCCGCCAGAGACAGTCCCGTCCCCAGGGAAGGCCCAATCCCACGACCAACTCCTCCGCCGGCGTCTCCACGCTGCGCAAATTCAAACCGAAACTGTACTTGCCGCTGGATATCTCGgtgccgccactgccgccgcTGCCCGTGACTGCTCCCGCTGCCGTTGCTCCTCCTCCGTCTGCTCTCCCActtccactcccactccctcTTCCGCcccctcctccgccgcctccGGCTGCTGCCGCCACCGCTGCCGCACCTAATCCGCCATCTGCTGGCGTGGCTGGTGGCAGGGAGAGCTTGTCGCTGGCACTGCCACTGTCGGTGCCACTGTcggtgccggtgccggtgccggtgccACTTGATTTCAGCCAAGCTagctgcagcagcagaggcCTGTCcggcctcctcctccagcaaCAGTCGGCTGCCGCATCTAGCACTGTGGCATCCACCATTGCACctccaactgcaactgcaactgcaactggaaCTGCGACTCCATTGCTGATGCCGCCACTGCCAGCGGTGCCCATCAAAGATGAGCCCATCGACACGGACGACGACTACCAGATGAAGTCGATTGACGAATCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGACATGCCGTTGATGACCTCCGACTACGACTATACGGCTCAGCATGGCGTGAACGCCGCCTCGGTAGCCGCCTCCCTGCCGGCCAATGCCGTCGCCAATGTGGCCGCCGCCGGCGACTCCAAGGTGGCCAGCTGTCGGGCCTGCAGTCTGCAGTTCTCTACGCGCGCCAATGCCCGCCGCCACGAACGCAACCTGCACCCGAATCTGTTCCAGCTCTCCACCGACTCGCCACATAATACGCCCATTACCAAGCCGACGCCCGCTCTGGCCGCCGCCCTGGAGATCCAGCGGGCAGCCGCGGAGGCAGCCACCGCCGAGGCTAACCGGGCAGCCGGAGCGGCGGGCGGGAACATCTCCACCCAGAAGTACCGTCAGGTGGTGATGAACGCGTTCATCAAGTGCGAGGGCGGGGGCTACGACTACGACAACCCGGAACAGTATCGGGCGCATCTCACCCGCGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTGGAGCAGTACCAGACGATGACGTGCCGGTGCTGCAACAAGTACTTCAGCACCTACAAGAACTTCATGGCCCACGTCCGCAAGAAGTACCCGCTGCTGCCCCGCAACCTCTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCCCTGTTCATCTCCCACTTGAAGAAGCGCAACTGCATCAACCTGTACCGGGTCCTGCACGGCATCCGTGAGAAGGCCAATGCGGCTGTCTCCAAGGATGGAGTAGAGTCGGTGACAGATGGGCGGGTGACCCACTTGGATGCCGGCTCCAGTCCGAATGTCGCGGGCGATCTCATCTCGGGCACTCATTCGGGATCGGAGCGACCGGAGAAGCTGCGGGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGTCCGAAGGGCTTCCGGACCAAGCACGAGTTCCGGACGCATGTCTACGACAAGCACGCCGACGTCCAGCGCAAGGACAGCAACTCGATCCAGTGCAACTTCTGCGGCCTGGACTTCGCCGATCCGGTGGACAGGCGGCGCCACTACAACAACATGGACTGCATCGTCCGGCTGCGCTGCATGACGTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGAGCACGTCTACCAGGACCATTTGGGCGGCGTGGGCGGCGCCACTGGCACCATTGGCGGCGCCAGCAGCGACAACGCCTCCTCCACCGGCAACAGCATGGAGCACTCGCCGGGCAAGCGCAGCCTCCTGAGCGCCCTGGGCATCGGTGTCGGCTCCTCGGCGGACGAGTCGCGCAGCAGCAGTGTGGCCCTCGGCCCCCTGACCTCCACACCCAAGCTGGCCGGAGGTGTGGCGTCCGGAGCCAACGCCTCGGGCAGTCGAGATGCCAACAGTGGCAGTGGAAATGGGTCGGCTCCCAAGTCGCAGTACTTCTCCCGTATGCCGCAGGTCTGTCCCATTTGCGGCCAGCagtacaacaactacaacaacgtGCTCCGGCACATGGAATCGAAGCATCCGAACAAGCTGCCCGAGACGTACAAGTGTGTGAGATGCGGCCTGGGCTATCCAAGGATCTCCTATCTGCGGGAGCACATGATCAATGTCCATGGCGTGGACAAGAACCGGCACTCCGGCGGATTCGAGTACATCGTCAATGCGGACGCAGTGAAGCTGGCGGACGGGAGCACACCGAACGTGTACACGGGTCGCTACGACTACGTGATGAAGGACCTCATGTCGATAACAAATGGTGGGACCCTCGatgacgatgacgaggagCCGGCCAGCGTGGCCAAGAAGATGCGCCTGgacgacagcagcaacaacagcagcctgGCCGGCGTGGGCGTCTccaaccagcagcagcagcagcagcagaaggagTGTCCCATCTGCAATGCCGTCTTCAGCAACAACATCGGCCTCTCCAACCACATGCGCTCCCACTACACGGCCTCCAACTCCGTAAATGCAGCCCTAACGGCAGCCAATCGGATGACGCCCAAGTCCCTGACCATTACGGCCACTCCGGCCGACACCACCATGGAGCTGTTGGGCGGCACGGCTGCCTCATCTGCTCCAGCGGCAGGAGGAGGTGCGGGAGTGCCGCCCGCAATGGCCAATCAGACGCCACAGGAACAGGCCGTGTTCCGGCGCAGTCTCGACCAGGCGGCCGATCGGCGCTTCCGCCGGATGCGCTGCCGGATCTGCCAGCGGCGGTTCAGCTCGAAGAAGTCCTACCGCTACCACATGCTCACCGACCACCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAACGCGGAGTTCGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATCGTGAAGCAGTTCGAGTGCGAGGTCTGCTCGATAGTCTACAGCTCGGAGATGGAGCTGCAGCAGCACAAGCGTAGTGTTCATAAGATGTCCtcctcagcagcagcagcagcagccacctcctcatcctcctccaaAATGGACGAGGACAGCATGGTCGTGGATGACAGCACCCTGAAGCCGACTGGCGGCGACCTCACAGACAACTCGGTGAACGTGTCTGGTGCCGGCGGGGGACTGAGCACGCCCCTCTACTGGTACCAGTGCAAGTACTGCCCCTCCAACTTCAACACCAACAAGAAGCTGGCCATTCACATCAACTCCCATGACGAGTTCGATTCCAACGACTACTCCTGCAAGGACTGCGGGAATGTCTACAGCGGCAGGAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTCCCCGATCCGGCCGAGTGCTCGCTCTGCCGGAAGATCTTCTTCGACCGCCAGATGCTGGACAACCATACGCCGACATGCAACCGGAAGCCCATCACCTCGACCGGCGCCCACCAACAAcacctccagcagcagcagcaacagatgcAGGAGGCACTGCATCAGCAGCAGATGGCCCTCCAGAAGCAGGTGGGCCTACACTCTGGAGTGTTCCGGCACAAGACCggcgacgatgacgacgacgaggacgaggacgagcaGCATCCGAAGCTGGCCGATGGAGCGGGTGACAGTGGAGCAGCTGCAcctgctcccgctcccgctccagtTCCGGCTAGCACGACGGCAGCTGCTGCTTCGATCAAGATACGCATTCCAGAGGTGGCGTGCACCATATGCGGGGCCCGCTTCACCGACCAGGAGATGTTCACCAAGCACATCCAGAAGCACGAACAGGAGCTCTATGTGGACAATCCACTGGCGGCGATGTTCGACGATGGGCCGCCGGACGCCGGCCAGTTCCAGGTGGAACTGGAGAAGCAGAACGAGAACGGGGAATACGCGTGCGATCTGTGCGCGAAGACGTTCCCCCAGGTCATAGCACTCAAGGTGCACCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCGACGGCGAAGCGACACATTTgaccaacaacaaccacaccaccaacaacaacaatcacaacagcagcaacaacaacaacaacaacagttcAATGTCGCACCTCCGCGAACTGCATGCAGTGGGTCTGATTCCCAACAACCAACAGCACCAGACCCAGGGACagtcccagcagcagcagctccaccaccaccagcagcaggcgGCGGGCAAGTCGATGAAGCGGAAGCGTGAACTGAAGTGCGAATACTGCCCCTCGACCttcatcagcaacaacaacctgCGCCGGCACATGTACGAACTGCACAAGCACGAGGTGAGCAATTTGCCAGAGCCGCCGGTCATCGTCGTGGACGACCATCTCTCCTGTCGACGCTGCAACCTCAAGTTCGAAACAAAGGAGCTGTGGATCGATCACAAGCTGGCGGACGCCAAGGTGGTGCGACCGTTCTGCCCCTTCCAGTGGGGCTGTGATCTGTGCGGCGAGTACCTGTCCCGCAAGGAGAAGCTCATGAATCACATCAACAACCATCTCAAGGAGGAGGTGATTGTGCCGGTGGCCACCAAGGAGGCGGCAGAGAGGGCGGCGCTAAAGCCTCGGGAGGcggaagcagcaacagcagcagcagcagcagaatcTACCGCCAAGAcggagaaggaggaggtggTTAAACACGAGGCGGAGAGCAAGTCGGAGGGGAAGGCTCAGCCGGACAGCGATGATCTGGACGAGGAGGACAGCTCCGGCGAGGAGGAGACCTCTGGCACgggcgacgacgacgaggacgacgacgatgatgaggaGGATGACTCGGAGGAGGATGTGGAagacgaggaggacgaggagggtGACGGCGGCGAGGGCGAGGACGAAGAAGGCGTCCCCCCACAACAGCCGCCGAAAATGAACCTAGCCCAGGACGATGACCTGGTGGAGGAGGTCCTCAGCTCCGACGACGATGTGGAGAGCGACGACGTCGACGAAATGGAAGAGGATGACGACGAGGACGTGgaggacgaggatgaggaggatgACGTGGAAGATCCCCAGCCGGTGGTGATGAACGGCAAGACGAAGATGCAACCACTCATTGTGGCCACTTCggacgaggaggacgacgacgacgatgaggaggtggaggaggatgGTATGCTGCCCATCGAGGACATTATCGAGGAGGAGTTTGACGAGGACGCGGCCGATCCGGACCCCGAGGACGACATtgtcgaggaggatgacgacgaggaggaggaggaggaggaagaggaagaggtAATCGAAGAGGTTGAACTCGACGACGACATGGACGAGGTGGGGAACGAAAGGCGCAACTCGTCGTCGGCCAGTGAGTCGGCCACCGCCAACACGACCACGTCGCAATCACATTCCACGGGTGAGCGGCACAAAAAGCCGGAGGTGCCAGGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTCCAGAGCCACATCAAAAGCCATTTTCTGAATGGTCCAAAGCTGGCAAGAGCCAAGGTGGTAGCCGGAGGAgcaacaccaccagcagcagtagcagcatcATCATCCTTGGCAACGGAACCGGACTCAAAGACGATAGCGACGACGTCGGTCAGTACGAgtagctccaccaccaccaccaccagcagcagcagcagcagcagtaagAGTAGTAAGCCAGCAGGTGCCACAAATGCTGCCACAGTTATCCTCCATCTCACTTGA
- Protein Sequence
- MCDATGAAASAATTNPVGSDAATTIPGTSSSSATTVAVAGGGGGAVGGTVAPSVPPPAPAAAITTSPMATTTTSSSATTTTTSSSSTTMSSAASSSSSSLKIEKRQNCCRLCIAPSSECISIMNSYAADKEPLSTKILNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRSLISQTKQRQWLEANNSSSHKSKLLNYLDLNSAENGSASEHHHHHHHHPHQQQQQQQQRQNQNQQQQQHVLDNEDETDNGSMPGAAATAAAILDGIPSLKKRKSLTVYVSPKPQQLPQQQLQQLPPPSSVPPPLLPPSSSSSSMNSSSNSAAQHSLQTLLLQVPGAAAAAASSVASSSSTATTTASMSASQQQQHQQQQHREQKQHRQYRRHHHHHLPQQLRLQRGRQMGHQHHHRHHFQQQLPQQQQQQQQQRHHPHPPGQRRQRQSRPQGRPNPTTNSSAGVSTLRKFKPKLYLPLDISVPPLPPLPVTAPAAVAPPPSALPLPLPLPLPPPPPPPPAAAATAAAPNPPSAGVAGGRESLSLALPLSVPLSVPVPVPVPLDFSQASCSSRGLSGLLLQQQSAAASSTVASTIAPPTATATATGTATPLLMPPLPAVPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLMTSDYDYTAQHGVNAASVAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAEAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQYRAHLTRDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHGIREKANAAVSKDGVESVTDGRVTHLDAGSSPNVAGDLISGTHSGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCNFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVGGATGTIGGASSDNASSTGNSMEHSPGKRSLLSALGIGVGSSADESRSSSVALGPLTSTPKLAGGVASGANASGSRDANSGSGNGSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEPASVAKKMRLDDSSNNSSLAGVGVSNQQQQQQQKECPICNAVFSNNIGLSNHMRSHYTASNSVNAALTAANRMTPKSLTITATPADTTMELLGGTAASSAPAAGGGAGVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKMSSSAAAAAATSSSSSKMDEDSMVVDDSTLKPTGGDLTDNSVNVSGAGGGLSTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQHLQQQQQQMQEALHQQQMALQKQVGLHSGVFRHKTGDDDDDEDEDEQHPKLADGAGDSGAAAPAPAPAPVPASTTAAAASIKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPPDAGQFQVELEKQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHLTNNNHTTNNNNHNSSNNNNNNSSMSHLRELHAVGLIPNNQQHQTQGQSQQQQLHHHQQQAAGKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLSCRRCNLKFETKELWIDHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKEAAERAALKPREAEAATAAAAAESTAKTEKEEVVKHEAESKSEGKAQPDSDDLDEEDSSGEEETSGTGDDDEDDDDDEEDDSEEDVEDEEDEEGDGGEGEDEEGVPPQQPPKMNLAQDDDLVEEVLSSDDDVESDDVDEMEEDDDEDVEDEDEEDDVEDPQPVVMNGKTKMQPLIVATSDEEDDDDDEEVEEDGMLPIEDIIEEEFDEDAADPDPEDDIVEEDDDEEEEEEEEEEVIEEVELDDDMDEVGNERRNSSSASESATANTTTSQSHSTGERHKKPEVPGFTCDLCQLCFDSQELLQSHIKSHFLNGPKLARAKVVAGGATPPAAVAASSSLATEPDSKTIATTSVSTSSSTTTTTSSSSSSSKSSKPAGATNAATVILHLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00550380;
- 90% Identity
- -
- 80% Identity
- -