Basic Information

Gene Symbol
hang
Assembly
GCA_035046425.1
Location
JAWNNY010000208.1:1223197-1237126[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.33 28 5.6 1.0 3 23 651 672 650 672 0.93
2 19 0.42 36 5.3 3.2 3 22 780 799 778 799 0.89
3 19 0.00071 0.06 14.0 3.3 1 22 902 923 902 925 0.90
4 19 0.054 4.7 8.1 0.1 2 21 937 956 936 957 0.93
5 19 0.00082 0.07 13.8 0.2 2 23 1088 1110 1087 1110 0.95
6 19 0.0024 0.2 12.4 0.1 1 23 1118 1141 1118 1141 0.96
7 19 1.9e-05 0.0016 18.9 0.1 2 23 1233 1254 1232 1254 0.97
8 19 0.00034 0.029 15.0 2.9 2 23 1341 1363 1340 1363 0.97
9 19 0.027 2.3 9.0 0.2 2 23 1372 1394 1371 1394 0.95
10 19 0.00094 0.08 13.6 0.2 1 23 1407 1430 1407 1430 0.97
11 19 0.00015 0.013 16.1 1.1 1 23 1490 1512 1490 1512 0.99
12 19 0.0023 0.2 12.4 0.9 1 23 1520 1543 1520 1543 0.96
13 19 0.89 77 4.2 0.3 2 19 1551 1568 1551 1569 0.93
14 19 3.1e-05 0.0027 18.3 0.4 3 23 1676 1696 1675 1696 0.98
15 19 0.0059 0.51 11.1 0.1 1 23 1733 1755 1733 1755 0.97
16 19 7.3e-05 0.0062 17.1 0.6 2 23 1841 1863 1840 1863 0.93
17 19 1.6 1.4e+02 3.4 0.1 2 20 1883 1901 1882 1903 0.91
18 19 0.0077 0.66 10.7 0.4 3 23 1918 1938 1918 1938 0.98
19 19 0.00012 0.01 16.4 2.1 1 23 2247 2269 2247 2269 0.98

Sequence Information

Coding Sequence
ATGTGCGACGCTATCGCagcagtggcaacaacaacaacaacaacaaccacaaatCCTGTGGGAAGTGATGCTGCAACAACGATTCCAGGAACTTCATCAGCGACGACGACGGTAGTGGCAgtaggtggaggaggaggaggaggaacagTGGCACCATCactagcaccaccaccagcaccaccaccagctaTAACCACATCGCCCATGGCGACTACAACAGCGCTGGCGgccacaaccacaaccacaTCGTCATCAACGACATCAACgacatcgtcgtcgtcggcgTCGTCGTCGCTGAAGATCGAGAAGCGACAAAACTGCTGCCGCCTGTGCATCGCCCCCTCCTCGGAGTGCATCTCGATCATGAACAGCTATGCGGCGGACAAGGAGCCGCTGTCCACCAAGATCCACAACTGCGTCAACATCAAGATCACGCCCCAGGATCGGCTGTCCTTGCAGATATGCCATGCCTGCATCAGCTACCTCAACTCGTGGCAGAGCTTCAAGAACCGCTCCCTCATCTCCCAGACCAAGCAGCGCCAATGGCTCGAGGcgaacaacagcagcagccataAGAGCAAGCTCCTCAACTACCTGGACCTGAACAGTGCCGAGAACGGCTCTGCCTCCGATCATCATTCGCATCATCCGCACCACAACCagagccagcagcagcagcgacaggatAATGAGGACGAAACGGACAATGCATCGATGCCAGGAGCGGCAGCCACAGCGGCTGCCATTCTGGACGGCATACCATCGCTGAAGAAACGAAAATCTCTAACAGTCTATGTGAGTCCTAAACCGCAACAGTTGCAACCACAGCAGTTGCCACCACCATCGTCGATACAACCACCATCgatgaacaacaacaacagcagcaacagcgccGCGCAGCACAGTCTGCAGACCCTGCTCCTCCAAGtcccaggagcagcagcagccgccgccgccggggCAGCAGCATCGGCAGCAGCAAGCTCTTCCTCCACAGCCACCACCACAGTATCCATGTCCGcttcccagcagcagcatcgggAGCAGAAACAGCATAGGCAGTATCGgaggcaccaccaccatcacctgCAACCGCAGCAGTTGCACCTCCAGCGTGGCAGGCAGAAGGgtcaccatcaccaccaccatcacttccagtcgcagcagcagccgcaacatcctccccagcagcagcagcagaggcatCATCCGCATCCGCCGGGTCAGCGGCGTCAGAGGCAGTCCCGTCCCCAGGGAAGGCACAACAACCCCACGACAACGAACGCCTCCACGCTGCGGAAGTTCAAGCCAAAACTGTACTTGCCACTGGATATATCGGTCCCACCACTGCCTCCGTTGCCTGTGACTGCTCCCGTTGCTCCTCCGTCTGCTCTCCCAGTGCCACTCCCTTttccaccgccaccgcctcccCCTCCACCCCCGCCTcctcctgcttctgctgccACGGCATCCAATCCTCAACCTGCTGGCGTGGCTGGGGGCAGGGAGAGCTTGTCGCTGGCACTGCCGCTAGATTTCAGCCAAGCTAGCAGCAGTAATCGCCTGTCCGGCCTTCTCCTCCAGCAACCAGGCGCATCTAGCGCTGTGGCATCTACCATTGCacctgcaactgcaacggcaactgcaactgcaacagccaGTGCAACTGCAACTCCATTGCTCATGCCGCCACTGCCAGCGGTGCCCATCAAGGATGAGCCCATCGACACGGATGACGACTACCAGATGAAGTCGATTGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGACATGCCGTTGATGACCTCCGACTACGACTACACGGCTCAGCATGGCGTTAATGCCGCCTCGGCAGCCGCCTCCCTGCCGGCCAATGCCGTCGCCAATGTGGCAGCTGCCGGCGACTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTCCAGTTCTCGACGCGCGCCAATGCCCGTCGCCACGAACGCAACCTGCACCCGAATCTGTTCCAGCTCTCCACCGACTCTCCCCACAACACGCCCATTACCAAGCCGACGCCCGCTTTGGCCGCCGCCTTGGAGATCCAGCGGGCAGCGGCGGAGGCAGCCACTGCAGAGGCCAACAGGGCAGCCGGAGCGGCGGGCGGGAATATATCCACCCAGAAGTACCGGCAGGTGGTGATGAACGCGTTCATAAAGTGCGAGGGCGGTGGCTACGACTACGACAACCCGGAACAGTACCGGGCGCACCTCACCCGCGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTGGAGCAGTACCAGACGATGACGTGCCGGTGCTGCAATAAGTACTTCAGCACCTACAAGAACTTCATGGCCCACGTCCGCAAGAAGTACCCGCTGCTGCCCCGCAACCTCTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCCCTGTTCATCTCCCACTTGAAGAAGCGCAACTGCATCAACCTGTACCGGGTGCTGCACGGCATCAGGGAGAAGGCCAACGCCGTAGTGGTGTCCAAGGACGGTGTAGAGACTGGCGATGGTAGAATTTTGACCCACATGGATGCCGGCTCCAGTCCGAATGTCACGGCGGACATCATCGCCAGTGCGGGCGGATCGGAGCGGCCGGAGAAGCTGCGGGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGTCCCAAGGGCTTCCGCACCAAGCACGAATTCCGGACGCACGTCTACGACAAGCATGCGGATGTCCAGCGGAAGGACAGCAACTCGATCCAGTGCAACTTCTGCGGCCTGGACTTTGCCGATCCGGTGGACAGGCGGCGGCACTACAACAACATGGACTGCATCGTCCGGCTGCGCTGCATGACGTGCGACGCCAAGCTGGAGACGCACCAGCGCTTCCTCGAGCACGTCTACCAGGACCACTTGGGCGGCGTGGGCGGCGGCACGGGCACTGGCGGTGCCAGCAGTGACAACGCCTCCACCACCGGCAACAGCATGGAGCACTCGCCGGGCAAGCGCAGTCTCCTGAGTGCCCTCGGCATCGGTGTGGGCTCCTCGGCGGACGAATCGCGCAGCAGCAGTGTGGCCCTCGGCCCCCTAACCTCCACACCCAAGCCGGCCGGCGGCACTGCCTCCGGCATCCCTTCGGGCAGTCGAGATGCCGCTAGCAGTGGCGGTAATGGATCCGCTCCCAAGTCCCAATACTTCTCCCGCATGCCGCAGGTCTGTCCCATTTGCGGCCAGCAgtacaacaactacaacaacgtGCTCCGGCACATGGAATCGAAGCATCCGAACAAGCTGCCCGAGACGTACAAGTGTGTGCGGTGTGGCCTGGGGTATCCGAGGATCTCCTACCTGCGGGAGCACATGATCAATGTCCATGGAGTCGACAAGAATCGGCACTCCGGCGGCTTCGAGTACATCGTCAATGCGGATGCAGTGAAGCTGGCTGACGGGAGCACACCGAACGTGTACACGGGTCGCTACGACTACGTGATGAAGGACCTCATGTCGATAACAAATGGTGGGACCCTCGatgacgacgacgaggagccGGCCGGCGTGGCCAAGAAGATGCGTCTGgacgacagcagcaacaacagcagcctgGCCGGCGTGGGCGTCTccaaccagcagcagcagcagcagcagaaggagTGCCCCATCTGCAACGCCGTCTTCAGCAACAACATCGGCCTCTCCAACCACATGCGCTCCCACTACACGGCCTCCAACTCCGTGAATGCCGCCCTCACGGCCGCCAATCGAATGACGCCCAAGTCCCTGACCATAACAGCCACTCCGGCCGACACCACCATGGAGCTGCTAGGTGGCGCAACTGCCTCATCCGTtccagcagcaggaggaggaggaggagctgcggGAGTTCCACCTGCGATGGCCAATCAGACGCCCCAGGAACAGGCCGTTTTCCGGCGCAGTCTCGACCAGGCAGCCGACCGGCGCTTCCGCAGGATGCGTTGCCGGATCTGCCAGCGGCGGTTCAGCTCGAAGAAGTCCTACCGCTACCACATGCTCACCGACCACCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAACGCGGAGTTCGCCTACGAGAAGGGTCTGAAGGTGCATCTCTTCAAGGTGCACGGGCGGGCCATCAAGGACGAGATGATTGTGAAGCAGTTCGAGTGCGAGGTGTGCTCGATAGTCTACAGCTCGGAGATGGAGCTGCAGCAGCACAAGCGCAGTGTCCACAAGATGTCCTCCTCTTCGGCCTCGGCTGCAGCTGCCTCTGGGGGAGGAGCCTCCTCCAAAATGGAAGACGACAGCATAGTCCTGGAGGACAGCACTTTGAAGCCAACTGCCGGAGATCTGACGGACACCTCCGTGAACGTGTCTGGGGCCGGGGGCTTGACCACGCCCCTCTACTGGTACCAGTGCAAGTACTGCCCCTCCAACTTCAACACCAACAAAAAGCTGGCCATCCACATCAACTCCCACGACGAGTTCGATTCGAACGACTACTCATGCAAAGACTGCGGGAATGTGTACAGTGGAAGGAAGAGTCTATGGGTCCATCGGTATAAGAAGCATCCTCAGGTCCCTGATCCGGCCGAGTGCTCGCTCTGCCGCAAGATCTTCTTCGACCGCCAGATGCTGGACAACCACACGCCGACTTGCAACCGCAAGCCCATCACCTCCACCGGCGcccaccaacagcagcagcagcagcagcaacagctgcaGGAGGCACTGCATCAGCAGCAGATGGCCCTCCAGAAGCAGGTGGGCCTGCACTCTGGAGTGTTCCGGCACAAGACCggcgacgatgacgacgaggaggacgatGATGATCAGCTCCCGAAGCTGGCcgatggaggaggaggtgggggTGAGAGTGGagcagctgctcctcctcctgctcccgctccaGCTCCGGCCAGCACGACGGCAGCTGCTACGATGAAGATACGCATTCCAGAGGTGGCGTGCACCATTTGTGGGGCCCGCTTCACCGACCAGGAGATGTTCACCAAGCACATCCAGAAGCACGAACAGGAACTGTACGTGGACAATCCCCTGGCGGCGATGTTCGACGATGGGCCGCCAGATGCCGGCCAGTTTCAGGTGGAGCTGGAGAAGCAGAACGAGAACGGGGAATATGCGTGCGATCTGTGCGCAAAGACGTTCCCCCAGGTCATAGCACTCAAGGTGCACCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAATCCCATCGACGGCGAAGCGACACATTtgaccaacaacaaccacaccaccagcaacaacaacaacagcagcagcaacaacaacaacaacaacaacaacagcatgTCACACCTCCGGGAACTACATGCTGTGGGTCTGATTCCAAACAACCAACAGCATCAGAGCCAGGAGCAGCAATCCcagcatccgcatccgcagcAGGCGGGCAAGTCGATGAAGCGGAAGCGTGAACTGAAGTGCGAATACTGCCCCTCGACCttcatcagcaacaacaacctgCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTGAGCAACCTGCCGGAGCCGCCGGTCATCGTCGTGGACGATCATCTCTCCTGCCGCCGTTGCAATCTCAAGTTCGAGACGAAGGAGCTGTGGATCGATCACAAGCTGGCGGACGCCAAGGTGGTGCGACCGTTCTGCCCCTTCCAGTGGGGCTGTGATCTGTGCGGCGAGTATCTATCCCGCAAGGAGAAGCTCATGAATCACATCAACAATCATCTCAAGGAGGAGGTTATTGTGCCGGTGGCCACCAAGGAGGCGGCGGAGAgggcggcggcagcggtgAAGGCGCAGGAGGCGGaggcagcaactgcaacggcagAATCCACCGTCAagacggaggaggaggaggcggcagcggcagcggcggcggttTTGGTCAAGCACGAGGTGGAGGGCAAGTCGGAGGTGAAGACTCAGCCGGACAGCGAtgatctggaggaggaggatagCTCCGGCGAGGAGGAGACCTCTGGCACgggcgacgacgaggaggacgacgatgatgaggaGGATGACTCGGAGGAGGATGTGGAAgatgaggaggacgaggagggcGACGGCGGCGAGGGTGAGGACGAAGAAGGCGTCCCCCCGCAACAGCCGCCGAAAATGAACCTCGCCCAGGACGATGACCTGGTGGAGGAGGTCCTCAGCTCCGACGACGATGTGGAGAGCGACGACGTCGACGAAATGGAAGAGGATGACGACGAAGACGTCGAAgacgatgaggaggaggaggaggatgacgTGGAAGATCCCCAGCCGGTGGTGATGAACGGAAAGGCGAAAATGCAGCCACTCATTGTGGCCACTTCggacgaggaggacgaggacgaggaggaggatggcATGTTGCCCATCGATGACATTATCGAGGAGGAGTTTGACGAGGACGCGGCCGACCCAGAGCCCGAGGACGACATTGTCGAGGAGGATGAtgagggggaggaggaggatgaggaagAGGTAATCGAAGAGGTGGAACTCGACGACGACATGGACGAGGTGGGCAACGAGAGGCGCAACTCGTCATCGGCGAGTGAGTCGGCgaacaccaccaccatcgccaacaccaccaccacggcCACGTCGCAATCACATTCCACGGGTGAGCGGCACAAAAAGCCGGAGGTGCCAGGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTACTCCAGAGCCACATCAAAAGCCATTTTCTGAATGGTCCAAAGCTGGCAAGAGCCAAGGTGGTAGCAGcggccggaggaggaggagcagcagcagcagcaacagcagcatcatCCTTGGCAACGGAACCAGACTCAAAGATGACGGGGAGCAGTACCAGTAGCTCCAGTAAGAGTAGTAAGCCAGCAGCTGCCACCAATGCTGCCACTGTTATCCTCCATCTCACTTGA
Protein Sequence
MCDAIAAVATTTTTTTTNPVGSDAATTIPGTSSATTTVVAVGGGGGGGTVAPSLAPPPAPPPAITTSPMATTTALAATTTTTSSSTTSTTSSSSASSSLKIEKRQNCCRLCIAPSSECISIMNSYAADKEPLSTKIHNCVNIKITPQDRLSLQICHACISYLNSWQSFKNRSLISQTKQRQWLEANNSSSHKSKLLNYLDLNSAENGSASDHHSHHPHHNQSQQQQRQDNEDETDNASMPGAAATAAAILDGIPSLKKRKSLTVYVSPKPQQLQPQQLPPPSSIQPPSMNNNNSSNSAAQHSLQTLLLQVPGAAAAAAAGAAASAAASSSSTATTTVSMSASQQQHREQKQHRQYRRHHHHHLQPQQLHLQRGRQKGHHHHHHHFQSQQQPQHPPQQQQQRHHPHPPGQRRQRQSRPQGRHNNPTTTNASTLRKFKPKLYLPLDISVPPLPPLPVTAPVAPPSALPVPLPFPPPPPPPPPPPPPASAATASNPQPAGVAGGRESLSLALPLDFSQASSSNRLSGLLLQQPGASSAVASTIAPATATATATATASATATPLLMPPLPAVPIKDEPIDTDDDYQMKSIDESDDMVDPTMFLERSEHEGDMPLMTSDYDYTAQHGVNAASAAASLPANAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAEAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQYRAHLTRDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLHGIREKANAVVVSKDGVETGDGRILTHMDAGSSPNVTADIIASAGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDSNSIQCNFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLEHVYQDHLGGVGGGTGTGGASSDNASTTGNSMEHSPGKRSLLSALGIGVGSSADESRSSSVALGPLTSTPKPAGGTASGIPSGSRDAASSGGNGSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEEPAGVAKKMRLDDSSNNSSLAGVGVSNQQQQQQQKECPICNAVFSNNIGLSNHMRSHYTASNSVNAALTAANRMTPKSLTITATPADTTMELLGGATASSVPAAGGGGGAAGVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECEVCSIVYSSEMELQQHKRSVHKMSSSSASAAAASGGGASSKMEDDSIVLEDSTLKPTAGDLTDTSVNVSGAGGLTTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQQQQQQQLQEALHQQQMALQKQVGLHSGVFRHKTGDDDDEEDDDDQLPKLADGGGGGGESGAAAPPPAPAPAPASTTAAATMKIRIPEVACTICGARFTDQEMFTKHIQKHEQELYVDNPLAAMFDDGPPDAGQFQVELEKQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATHLTNNNHTTSNNNNSSSNNNNNNNNSMSHLRELHAVGLIPNNQQHQSQEQQSQHPHPQQAGKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLSCRRCNLKFETKELWIDHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKEAAERAAAAVKAQEAEAATATAESTVKTEEEEAAAAAAAVLVKHEVEGKSEVKTQPDSDDLEEEDSSGEEETSGTGDDEEDDDDEEDDSEEDVEDEEDEEGDGGEGEDEEGVPPQQPPKMNLAQDDDLVEEVLSSDDDVESDDVDEMEEDDDEDVEDDEEEEEDDVEDPQPVVMNGKAKMQPLIVATSDEEDEDEEEDGMLPIDDIIEEEFDEDAADPEPEDDIVEEDDEGEEEDEEEVIEEVELDDDMDEVGNERRNSSSASESANTTTIANTTTTATSQSHSTGERHKKPEVPGFTCDLCQLCFDSQELLQSHIKSHFLNGPKLARAKVVAAAGGGGAAAAATAASSLATEPDSKMTGSSTSSSSKSSKPAAATNAATVILHLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00550380;
90% Identity
-
80% Identity
-