Dmim012600.1
Basic Information
- Insect
- Drosophila mimica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037043585.1
- Location
- JBAMBE010001187.1:1939938-1950759[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-10 4.9e-07 29.3 0.0 2 44 319 362 318 363 0.88 2 3 2 3.5e+03 -2.2 0.3 1 11 453 463 453 470 0.84 3 3 9.9e-19 1.7e-15 56.4 0.0 1 43 819 862 819 864 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTATAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAacatttcaacaacaacaacaacagcaacggcgcACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAATtgtagcaataacaacaacaacaacaacaacaacaacggcacaACTGAGCAGCAGcacgacagcgacagcagctcAAGCGCATCACTGCACAACAGTAGCAGaaactccaacaacaacaacaacaacaacatcaacaacatcaacaacagcaacagtagcaacaagcATAGAGCACGCAACGCCGCAAACAACGCCACAACATCGTCATCAGCAAGTACAATAGAACTTCAGAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCTGAAGTatctgccgccgccgccagtcCCGCACTCAAAGATACTCCCAGTCCCAGTGCGGATGCGCCCCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGactgtgccacgcccatttcaGCAGCAAGACACAACTACAGTCACGAGGATCTGAATAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCATGTGCCGCGCTCAGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCTCAAGTGACGCcagagctgcagcagctgcagcgctaTCTGGACGAGCAGGACGAGTCCGGGGAGGAGGCTGGAGATGGTGACGGCGACAGCAATGCCTCAACGCCAGCGCTGAGCTTTCAGGAGATGGCGCAACGTATTGTGCCCACCGAGCATCTGCACAAGTTGAGCACCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGAGCCCGTTCTGTCGCCAAAGTCATCGCGGACGCCACAGAGAGACGGCACTCCAACGGATAtgcaagctgcagcagcagcagcagcagcagccggtgGTGGCACCAATGCCGCCGGACTGCCTATGCCCATCGATCCCAATGTGCTGTTGAATACGCTGTTCCTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTGAAATCGCTGCTAATGGCCAAAAGTGGCGGCATGATCAATGAGGCGGTGGTTAATGCTGCTGCATCTGGACACGAGAGCAACGGCAGTGCCTCACTGCTCGATCAGTgtcggctgcagcagcaacagcaacaacagttgcagcatcTAAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCGTCTCGCCCACGTTgcgctgcaacaacagcagcagtagcagcaacatgaacaacaacaacaacaatagcaacaacaataataactcaACAActcacagcaacagcaaccgcaacgGCGGCGGCGATCATAGTCCACATTCTGCCTCACCaatgctggcagcagcagttgctgccgcAGCGGCCAGCAACAGTTACAGgcaaagcggcagcagcaacagcggcaacaatctGTTGTCCCCATCGCCGACATCCATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGATAGTCTgcgcaacaatggcaacaccAGCGGCAGCgaatgcagcagcagtggaGGCGGCGGGAACAGCAGTGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATAGGCGGCACAGACACCTCACGCTTTGGCGCCTCTCCTAATCTGCTCGCCCAGCAACATCACAGCCATCTGCCACCCGCACATCAtgcccaccagcagcagcacacgcatacgcatccgcatccgcattcgcatcagcatcagcagctcaGTGCCCAGGATGCGGCGGCGCTGGCCGCTGGTAAGGGGACGCGACCAAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGAGAGATGTCTGTGCATCGTGCCGGCAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAAGAGCGGCATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTTGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCCCTCAATAATCTAGACAAACTCAaggctggcagcagcagcatcaatgCCACCAGCAGCTCCGGCTCCAAGCTAAGCAATGCACTGaagagcagcagtagcagtgcAGCAAGTGccgcggcggcggcagcggcgtcGGTGCCCAACGGCATTAAGCTGCCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTTATCAAGTCACACCTGGCCGAGGTGATGCGAAACAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAACACCAGCGGCAATGGTAATGCACTGCTGGATCAGCTGCTGGTAAAGAAGACGCCGCTGCCGTTCACCAATAATCGCAGCAATGACTACCTCGGTGCCGCCTGTTCCACCTCCGAGAGCGTTAAACGTGCCGGCAGCCCGATGGGCGCCTATACGGATATTAAACGTGAGCGTCTCAGTCCCATGCGCAGTGCGGATAGTGCTAGCAGTGATGACGATCTTGAGcattccaacaacaacaacatcaataacaataacagcgacCTGGcgcacaacaagaacaacaagagcagcagcaacaacaacaacaacggcagcagcagcaacaatggaaATGGCCGCAGCCGGATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCCTGAAGAGCGATCAATCGCAGAGCTCCTCGGCGGCAGCACAACTCGCCAgtgcaagcagcaacaacaataaaatgatgGATCtcaatggcagcaacagtgTCAAATTCGAGTCGGAGCAGCAAGCAGCGCAGATCTCGCCCAGCAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAACAGTCCGAAGTGCATTCGGCCGCCACCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTFNPLNIAEQQPISITEDSIYQKPLNHRLAQPNGQHFNNNNNSNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSNNNNNNNNNNGTTEQQHDSDSSSSASLHNSSRNSNNNNNNNINNINNSNSSNKHRARNAANNATTSSSASTIELQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHANSVTPTTSEVSAAAASPALKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHNYSHEDLNSALQDVLVNKLGTRKAAKEYHVPRSALRNKLCKMSLDAKRPNAQVTPELQQLQRYLDEQDESGEEAGDGDGDSNASTPALSFQEMAQRIVPTEHLHKLSTMSEHNGSELGDDLEPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAGGGTNAAGLPMPIDPNVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKSGGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQHLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSVSPTLRCNNSSSSSNMNNNNNNSNNNNNSTTHSNSNRNGGGDHSPHSASPMLAAAVAAAAASNSYRQSGSSNSGNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHPHPHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKAGSSSINATSSSGSKLSNALKSSSSSAASAAAAAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGGHMKSALEFAENMYDGIIRKTLKNDGDVNTSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGAYTDIKRERLSPMRSADSASSDDDLEHSNNNNINNNNSDLAHNKNNKSSSNNNNNGSSSNNGNGRSRMTSRDSETDASSLKSDQSQSSSAAAQLASASSNNNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSEVHSAATEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00595868;
- 90% Identity
- iTF_00552225; iTF_00582881; iTF_00513378; iTF_00496516; iTF_00606983; iTF_00609800; iTF_00619760; iTF_00495030; iTF_00497303; iTF_00527967; iTF_00500228; iTF_00498790; iTF_00557127; iTF_00482152; iTF_00576265; iTF_00522091; iTF_00570318; iTF_00543664; iTF_00516913; iTF_00499506; iTF_00560178; iTF_00485780; iTF_00558581; iTF_00573969; iTF_00566710; iTF_00576982; iTF_00593014; iTF_00616118; iTF_00498071; iTF_00521271; iTF_00525047; iTF_00542360; iTF_00511195; iTF_00501724; iTF_00564572; iTF_00595868; iTF_00518361; iTF_00535231; iTF_00597280;
- 80% Identity
- -