Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_037043585.1
Location
JBAMBE010001187.1:1939938-1950759[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.8e-10 4.9e-07 29.3 0.0 2 44 319 362 318 363 0.88
2 3 2 3.5e+03 -2.2 0.3 1 11 453 463 453 470 0.84
3 3 9.9e-19 1.7e-15 56.4 0.0 1 43 819 862 819 864 0.95

Sequence Information

Coding Sequence
ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGTTCAACCCATTGAATATCGCCGAGCAACAGCCCATATCTATAACAGAAGACAGCATCTATCAGAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGCCAacatttcaacaacaacaacaacagcaacggcgcACTGCAATTTGAAAGAGATTTTGAGAAGAACCACACATCACACGACCACGACTCAAGTGGAACATCACGTAGTAGCTCCGGCTCACCATCACCACCGTCAGAACCCAACGATTGGACACCGTTTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGTTAACGGTGAACGCCAAAGGCGAATTGGTGGTCGAAACAACGGCAACCGCGTCTAGCCTTAATtgtagcaataacaacaacaacaacaacaacaacaacggcacaACTGAGCAGCAGcacgacagcgacagcagctcAAGCGCATCACTGCACAACAGTAGCAGaaactccaacaacaacaacaacaacaacatcaacaacatcaacaacagcaacagtagcaacaagcATAGAGCACGCAACGCCGCAAACAACGCCACAACATCGTCATCAGCAAGTACAATAGAACTTCAGAAGCTGCTCACCCAGCAAGCAGCAGAAATGACATCGATGGAATCAATGGCCGCCAAGCTGGCACAGTTCTCAATGATGGCCGATTTCAATCTGATGAGCACGCTGGCCAATCAACAACATGCTAACTCGGTAACACCAACTACCTCTGAAGTatctgccgccgccgccagtcCCGCACTCAAAGATACTCCCAGTCCCAGTGCGGATGCGCCCCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATTAGCGGCGATATAAAGACAGCCAGAGCTCTGTCTGactgtgccacgcccatttcaGCAGCAAGACACAACTACAGTCACGAGGATCTGAATAGTGCGCTGCAGGATGTGCTGGTCAATAAACTGGGTACCCGCAAAGCAGCCAAGGAGTATCATGTGCCGCGCTCAGCGCTGCGCAACAAGCTGTGCAAAATGTCCTTGGATGCGAAACGACCGAATGCTCAAGTGACGCcagagctgcagcagctgcagcgctaTCTGGACGAGCAGGACGAGTCCGGGGAGGAGGCTGGAGATGGTGACGGCGACAGCAATGCCTCAACGCCAGCGCTGAGCTTTCAGGAGATGGCGCAACGTATTGTGCCCACCGAGCATCTGCACAAGTTGAGCACCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGAGCCCGTTCTGTCGCCAAAGTCATCGCGGACGCCACAGAGAGACGGCACTCCAACGGATAtgcaagctgcagcagcagcagcagcagcagccggtgGTGGCACCAATGCCGCCGGACTGCCTATGCCCATCGATCCCAATGTGCTGTTGAATACGCTGTTCCTGGCTGCCGGCTTTGGTGTTATACCCAAGCTGGACGAGACGCAGACGCTGGGTGATCTGCTGAAATCGCTGCTAATGGCCAAAAGTGGCGGCATGATCAATGAGGCGGTGGTTAATGCTGCTGCATCTGGACACGAGAGCAACGGCAGTGCCTCACTGCTCGATCAGTgtcggctgcagcagcaacagcaacaacagttgcagcatcTAAATGCAGTTGCCGCCTATCGCCGTCATCTACCAAAGTCTGAAACGCCTGAGACGAGCTCCTCGCTGGATGCCAATGAGGCGTGTGAGGATCCCATACTGAAGATTCCGTCCTTCAAGATCAGCGGCGCACCGAGCGTCTCGCCCACGTTgcgctgcaacaacagcagcagtagcagcaacatgaacaacaacaacaacaatagcaacaacaataataactcaACAActcacagcaacagcaaccgcaacgGCGGCGGCGATCATAGTCCACATTCTGCCTCACCaatgctggcagcagcagttgctgccgcAGCGGCCAGCAACAGTTACAGgcaaagcggcagcagcaacagcggcaacaatctGTTGTCCCCATCGCCGACATCCATACAGAAGATGATGGCCAACACCATACAGCGCAAGATCAACGAGCAGAGCAGCCAGGATAGTCTgcgcaacaatggcaacaccAGCGGCAGCgaatgcagcagcagtggaGGCGGCGGGAACAGCAGTGCGAGCAGGAAGCCAAGCATATCGGTGGCCAAAATGATAGGCGGCACAGACACCTCACGCTTTGGCGCCTCTCCTAATCTGCTCGCCCAGCAACATCACAGCCATCTGCCACCCGCACATCAtgcccaccagcagcagcacacgcatacgcatccgcatccgcattcgcatcagcatcagcagctcaGTGCCCAGGATGCGGCGGCGCTGGCCGCTGGTAAGGGGACGCGACCAAAGCGTGGTAAGTACCGCAACTACGACAGGGACAGCCTGGTCGAGGCAGTCAAGGCCGTGCAGCGGGGAGAGATGTCTGTGCATCGTGCCGGCAGCTATTATGGTGTGCCGCACTCAACGCTGGAGTACAAAGTGAAAGAGCGGCATTTGATGCGACCGCGCAAGCGGGAGCCCAAACCGCAACCGGATCTCGTTGGGCTGACGGGGGCAGCGAATAAGATTAGTTTGACTGCCCTCAATAATCTAGACAAACTCAaggctggcagcagcagcatcaatgCCACCAGCAGCTCCGGCTCCAAGCTAAGCAATGCACTGaagagcagcagtagcagtgcAGCAAGTGccgcggcggcggcagcggcgtcGGTGCCCAACGGCATTAAGCTGCCCATATATGATGCAGCACCGCAGCTGTCCTTTCAGCCGAACATGTTCTGGCCACAGACGAATGCCGGCGCCAACTATGCTCTGGACTTCAATCGCAATCCCGAATTTATCAAGTCACACCTGGCCGAGGTGATGCGAAACAGTCAACTGGGCGTGGCTAGCAATCATCATGGTCATGGTGGCGGGCATATGAAAAGTGCTCTGGAGTTTGCCGAGAACATGTACGATGGCATCATCCGGAAGACGCTGAAGAACGATGGCGATGTGAACACCAGCGGCAATGGTAATGCACTGCTGGATCAGCTGCTGGTAAAGAAGACGCCGCTGCCGTTCACCAATAATCGCAGCAATGACTACCTCGGTGCCGCCTGTTCCACCTCCGAGAGCGTTAAACGTGCCGGCAGCCCGATGGGCGCCTATACGGATATTAAACGTGAGCGTCTCAGTCCCATGCGCAGTGCGGATAGTGCTAGCAGTGATGACGATCTTGAGcattccaacaacaacaacatcaataacaataacagcgacCTGGcgcacaacaagaacaacaagagcagcagcaacaacaacaacaacggcagcagcagcaacaatggaaATGGCCGCAGCCGGATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCCTGAAGAGCGATCAATCGCAGAGCTCCTCGGCGGCAGCACAACTCGCCAgtgcaagcagcaacaacaataaaatgatgGATCtcaatggcagcaacagtgTCAAATTCGAGTCGGAGCAGCAAGCAGCGCAGATCTCGCCCAGCAACTCCATATTGCACGAAAAGCTGGCGAAGATCAAGGCCGAACAGTCCGAAGTGCATTCGGCCGCCACCGAGGAGCAGTTATAG
Protein Sequence
MGRRKWKHYQDQLTFNPLNIAEQQPISITEDSIYQKPLNHRLAQPNGQHFNNNNNSNGALQFERDFEKNHTSHDHDSSGTSRSSSGSPSPPSEPNDWTPFDKCNFCVNGRLLTVNAKGELVVETTATASSLNCSNNNNNNNNNNGTTEQQHDSDSSSSASLHNSSRNSNNNNNNNINNINNSNSSNKHRARNAANNATTSSSASTIELQKLLTQQAAEMTSMESMAAKLAQFSMMADFNLMSTLANQQHANSVTPTTSEVSAAAASPALKDTPSPSADAPLDLSSKPSPNSSISGDIKTARALSDCATPISAARHNYSHEDLNSALQDVLVNKLGTRKAAKEYHVPRSALRNKLCKMSLDAKRPNAQVTPELQQLQRYLDEQDESGEEAGDGDGDSNASTPALSFQEMAQRIVPTEHLHKLSTMSEHNGSELGDDLEPVLSPKSSRTPQRDGTPTDMQAAAAAAAAAGGGTNAAGLPMPIDPNVLLNTLFLAAGFGVIPKLDETQTLGDLLKSLLMAKSGGMINEAVVNAAASGHESNGSASLLDQCRLQQQQQQQLQHLNAVAAYRRHLPKSETPETSSSLDANEACEDPILKIPSFKISGAPSVSPTLRCNNSSSSSNMNNNNNNSNNNNNSTTHSNSNRNGGGDHSPHSASPMLAAAVAAAAASNSYRQSGSSNSGNNLLSPSPTSIQKMMANTIQRKINEQSSQDSLRNNGNTSGSECSSSGGGGNSSASRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLPPAHHAHQQQHTHTHPHPHSHQHQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKISLTALNNLDKLKAGSSSINATSSSGSKLSNALKSSSSSAASAAAAAAASVPNGIKLPIYDAAPQLSFQPNMFWPQTNAGANYALDFNRNPEFIKSHLAEVMRNSQLGVASNHHGHGGGHMKSALEFAENMYDGIIRKTLKNDGDVNTSGNGNALLDQLLVKKTPLPFTNNRSNDYLGAACSTSESVKRAGSPMGAYTDIKRERLSPMRSADSASSDDDLEHSNNNNINNNNSDLAHNKNNKSSSNNNNNGSSSNNGNGRSRMTSRDSETDASSLKSDQSQSSSAAAQLASASSNNNKMMDLNGSNSVKFESEQQAAQISPSNSILHEKLAKIKAEQSEVHSAATEEQL